Columba livia (rock pigeon): 102094533
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Entry
102094533 CDS
T02912
Symbol
CACNA1H
Name
(RefSeq) voltage-dependent T-type calcium channel subunit alpha-1H
KO
K04855
voltage-dependent calcium channel T type alpha-1H
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04010
MAPK signaling pathway
clv04020
Calcium signaling pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04010 MAPK signaling pathway
102094533 (CACNA1H)
04020 Calcium signaling pathway
102094533 (CACNA1H)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clv04040
]
102094533 (CACNA1H)
Ion channels [BR:
clv04040
]
Voltage-gated cation channels
Calcium channel, voltage-gated (Cav)
102094533 (CACNA1H)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ion_trans
PKD_channel
DUF3043
Motif
Other DBs
NCBI-GeneID:
102094533
NCBI-ProteinID:
XP_021146044
LinkDB
All DBs
Position
Unknown
AA seq
2381 aa
AA seq
DB search
MLVILLNCVTLGMFQPCEDVECQSERCTILEAFDDFIFAFFAVEMVIKMVALGIFGQKCY
LGDTWNRLDFFIVMAGMMEYSLDGHNVSLSAIRTVRVLRPLRAINRVPSMRILVTLLLDT
LPMLGNVLLLCFFVFFIFGIVGVQLWAGLLRNRCFLDRNFAMTYNLTFLHPYYRTDEAEE
NPFICSSHRENGMQKCSNIPTRKEYKVECTLSMDSYTPSLYSPDFSSRNACINWNQYYNV
CMAGDVNPHNGAINFDNIGYAWIAIFQVITLEGWVDIMYYVMDAHSFYNFIYFILLIIVG
SFFMINLCLVVIATQFSETKQRENQLMQEQRARYLSNDSTIASFSEPGSCYEELLKYICH
IFRKMKRRTIRLYNNWQSKRRKKVNPNSTTNGQSHRGKKRITSIHHLIHHHHHHHHHHYH
ISNGSPRGPCSNPEICDLELKVMKPGGQLMLPSPSPNLQSPAPPPDSESVHSIYHADCHV
EGPQVNCKSSNAPASIKLTAGLSNHGNMNYPTILPSPTSKATSVAVPKGKKNGNSPVAVV
NSPVNLGADSYGKLQQLVGEHDLCKESTQVCGGRXXXXXXLPGRPGGTLTCELQDCPFCA
SLLEDPEFAFSESDSGDSDSNGVYEFTQDLRHSDRRDQLQQQPGRRKRKKKKPKERNKVT
RLWKAFGSKLKRIVESKYFNRGIMIAILINTLSMGIEYHEQPDELTNALEISNIVFTSMF
ALEMLLKLLAFGLFGYIKNPYNIFDGIIVVISVWEIIGQSDGGLSVLRTFRLLRVLKLVR
FMPALRRQLVVLMKTMDNVATFCMLLMLFIFIFSILGMHLFGCKFSLKTDTGDTVPDRKN
FDSLLWAIVTVFQILTQEDWNVVLYNGMASTSSWAALYFVALMTFGNYVLFNLLVAILVE
GFQAEGDANRSDTDEDKTSANFDDDFEKLKDLRATEMKMYSLTVTPNGHLEGRGSMPPPI
IMRTAATPMPTPKCSPHMDSVHTFVDSRRGSNASLDPLSCDQKSLSSLRSSPCANWGTSS
NWGSRRSSWNSLGRAPSLKKKNQSGERESLLSGEGKGSTDDDSDDAKSSTVSRPSLHRRA
ESLDYRSTLDLPELLQLPTMHHSLSISPVAVLPAEYQDCNGKMVHVPSEFFLRVDGHKED
AMDYEDDMEDSYCYRIRKVLEPYKPQWCKTHEDWSLYLFSPQNRFRVTCQKVIAHKMFDH
VVLVFIFLNCITIALERPDIDPHSTERIFLSVSNYIFTAIFVAEMMVKVVALGFFSGENT
YLQSSWNVLDGVLVFVSIIDIIVSMASAGGAKILGVLRVLRLLRTLRPLRVISRAPGLKL
VVETLISSLRPIGNIVLICCAFFIIFGILGVQLFKGKFYYCDGPDVKNITTKTDCTNARY
KWVRRKYNFDNLGQALMSLFVLSSKDGWVNIMYDGLDAVGIDQQPIQNHNPWMLLYFISF
LLIVSFFVLNMFVGVVVENFHKCRQHQEAEEARRREEKRLRRLEKKRRSKEIYLSEAQRR
PYYADYSPARKYIHTLCTSHYLDLFITFIIGVNVITMSMEHYNQPKSLDEALKYCNYVFT
IVFVFEAVLKLVAFGFRRFFKDRWNQLDLAIVLLSIVGITLEEIEMNAALPINPTIIRIM
RVLRIARVLKLLKMATGMRALLDTVVQALPQVGNLGLLFMLLFFIYAALGVELFGKLDCS
EENPCEGLSRHATFTNFGMAFLTLFRVSTGDNWNGIMKDTLRECTREDKHCLSYLPVISP
VYFVTFVLIAQFVLVNVVVAVLMKHLEESNKEAKEDAEMDAEIELEMSRGATTPASCGSR
GGAVAPESRATYRSQETMKLDSAVQETLSCENVSLAIPDSDTLEGAETPVMETPSFCSVS
HHVLTPSHKTPGHQAEGGATSLRPQDTQNLLTVRKISVSRMHSLPNDSYMFRPVMPAKAP
FPLHEVEMETYPCKSQRGSITSIRSQPVGTCSSLRVPAESLLLPLRSPNHEGRDRWKVLP
PNLAPRSPTLNKLLCRQEAIRTDSVDGHTPERKDSLQAEPGEMLPSPKHPQSTFTPSPHH
PTATSLPGTPPLSPPASPHRHPGTLARKHSRGQHSVPSRPPSPDSSQPSPEGGLFESSDL
ADEEVRHINSSAKDWGGEHSNAGSCSTSPFISPAPSPVPLKNCSTTRLSRGSNKEKDLKK
FYSIDPKGFLTKPSWADDQRRHSIEICPSIGDRDFEDAAEDKQRSPVHIQAESEYIHGAR
RKKKMSPPCISIDPPMEDDGGAASRTKPSENSMLRRRTPSCEFPAYRESLELAESQPGEP
GSKTERRGQPPCRGEHLTIPNFSFEQLDGSSSSSLSDLLLNSGQSAPDPGASELKQMDHL
KTQWSNSEKSKELLGGTKSPLRKQDLVPVTVATEEDIDDPV
NT seq
7146 nt
NT seq
+upstream
nt +downstream
nt
atgctggtcatcctcctgaactgcgtcaccctgggcatgttccagccctgcgaggacgtg
gagtgccagtcggagcggtgcaccatcctggaggcatttgacgacttcattttcgctttc
tttgcggtggagatggtcatcaagatggtggctctggggatcttcgggcagaagtgttac
cttggagatacgtggaatcgcctggacttcttcatcgtgatggcgggcatgatggagtat
tctctggacgggcacaacgtgagcttgtctgcgatccgcaccgtccgggtacttcggccg
ctacgagccattaacagggtcccaagtatgcgaatactcgtcaccctgctgttagatact
ctgcctatgttaggcaacgtcctcctcttgtgcttctttgtcttcttcatctttgggatt
gtcggtgtgcagctctgggcagggctgctgagaaacaggtgtttcctagacaggaatttt
gcaatgacatacaacctgaccttcctgcatccgtactaccggacagacgaagcagaggag
aacccgttcatctgctcatcgcatcgtgagaacggcatgcagaaatgctccaacatccca
accaggaaggagtacaaggtggagtgcaccttgagcatggactcctacacccccagtttg
tacagccctgacttcagcagcaggaacgcctgcataaactggaaccagtattacaacgta
tgcatggcaggggacgtaaacccacacaacggagctatcaattttgataatattggatat
gcctggatagctatttttcaggttataaccctggaaggatgggttgacatcatgtattat
gtgatggatgcacattctttttacaattttatatattttatattgcttataatagttggt
tccttcttcatgattaacttgtgcctggttgtgatagcaacacagttttctgaaacaaag
cagcgggagaaccagctgatgcaagagcagcgggcccgttatctctccaacgacagcaca
attgccagcttctcggagccagggagctgctacgaggagctgctcaagtacatctgccac
atcttcaggaagatgaaacggcggacaatacgcctgtacaataactggcagagtaagcgc
cggaaaaaagtgaaccccaacagcaccacaaatggacaaagccaccgaggcaaaaagcgc
atcacctccatacaccacctcatccaccaccaccatcaccaccaccaccaccactatcac
atcagcaacgggagccctcggggaccatgttccaaccctgagatctgtgacctggaactc
aaggtcatgaaacctggaggccagttgatgcttccttctccatcacccaacttgcagagc
cctgctcctcctccagattcggagtctgtgcacagtatttaccatgcagactgtcatgtc
gaaggaccacaagtgaactgtaagtcttccaatgcccctgcaagcattaaactgacggct
ggactctccaaccatggcaacatgaactatcctaccatcctgccctctccgactagcaaa
gccacttctgttgcggttcctaaaggaaagaagaatggcaattcacctgtggctgtggtt
aatagccctgtgaatttgggcgcggattcttacgggaagctgcagcaactggtaggagag
catgacttgtgcaaggagagcacacaagtctgcggcggacgnnnnnnnnnnnnnnnnncg
ctgcccggccggccgggcggcacgctgacctgcgagctgcaggactgtccattctgcgcc
agcctcctggaagaccccgagttcgccttcagcgagtccgacagcggcgactccgacagc
aacggtgtctacgagttcacccaggacctgcggcacagcgaccgcagagaccagctccag
cagcagccgggcaggaggaagaggaagaagaaaaaacccaaggagaggaacaaggtgacc
cgcctgtggaaggcatttggcagcaagctgaagaggattgtggagagcaaatatttcaac
cgggggattatgatagccattctcatcaacacgctgagcatgggcatcgagtaccacgag
cagccggacgagctgaccaatgccttggagatcagtaacatcgtcttcacaagcatgttt
gccctggagatgctcctgaaactcctcgcctttggcctctttggctacatcaagaaccca
tacaacatctttgatgggatcatagttgtcatcagtgtctgggagatcattggccagtcg
gacggaggcctctctgtcctacgaacatttcggctgctccgggtgctgaaactggtgcgt
ttcatgccggccctccgtcgccagctggtggtcctgatgaagacaatggacaacgtagcc
accttctgcatgttgctcatgctcttcatctttatcttcagcattctcggcatgcatctt
tttggatgcaagttcagcctgaaaactgatacaggagacacagttccagaccgaaagaat
tttgactccttactttgggccattgtgactgtatttcagatcctcactcaagaggactgg
aacgtggtcctgtacaacgggatggcatctacgtcctcgtgggcagcactctactttgtg
gccctgatgacctttggcaattacgtgctcttcaaccttcttgttgccattctggtcgaa
ggcttccaggcagagggtgatgccaacaggtcagacacagatgaggacaagacatctgcc
aacttcgatgatgattttgagaagctaaaagacctccgagcaacagagatgaagatgtac
tcgctcacggtcaccccaaacggacacctggagggcaggggcagcatgccaccacccatc
atcatgcgcactgccgccacgccaatgcccacgccaaagtgttccccacacatggactca
gtgcacacttttgtggactcgaggagagggagtaacgcttcgctagaccccttgagctgc
gatcagaagtccttgtccagcctccgcagttccccttgcgccaactggggcaccagcagc
aactggggaagccgacgctcgagctggaatagcctgggcagagccccgagcctcaagaag
aagaaccagtcgggagaacgagagtccttgctctctggggagggaaaaggcagcacagat
gatgactccgatgatgccaagtctagcacagtcagtaggccctcattgcaccgccgggca
gagtccctggactaccgcagcaccctggacttgcccgagctgctccagttgcctaccatg
caccactcgctcagcatcagccccgtggccgttctgcccgccgagtaccaagactgcaac
ggcaagatggttcacgtccccagcgagttcttcctgcgtgtcgatggccacaaagaggat
gccatggactatgaggatgacatggaggatagttactgctaccggattcgtaaagtcctg
gagccctacaaaccacagtggtgcaagactcatgaagactggtccctctacttgttttcc
ccacagaatcggtttcgagtgacatgccagaaggtcattgctcacaaaatgtttgatcac
gtggtgctggtcttcatatttctcaactgcatcactatagcactggagcgaccagacata
gatccgcacagcacagaaaggatattcttaagtgtttctaattacatcttcactgcaatc
tttgtggctgaaatgatggttaaggtggtagctcttggctttttctctggggagaacacc
tacctgcagagcagctggaatgtcctggatggagtcctggtctttgtatctatcattgac
attattgtctccatggcatcggcaggcggagctaagatcctgggtgtccttcgcgttttg
agacttctgcggaccttgagacctctccgagtcatcagcagagctccagggctgaagctg
gtagtggaaaccttgatctcctccttgaggcctattgggaatattgttctcatctgctgt
gctttcttcattatctttgggattttaggggtccagctttttaaaggcaagttctactac
tgtgatggtcctgatgtaaaaaacatcactaccaagactgactgcaccaatgcacgctac
aaatgggttcggcggaagtacaactttgacaatttgggacaggccctcatgtccttgttt
gtcctctcctccaaagatggctgggtgaacatcatgtacgatggtttggatgccgtgggc
attgaccaacagcccatccagaaccataacccttggatgcttctctacttcatctccttc
ctgctcatcgtcagcttcttcgtgctcaacatgtttgtcggggtggtggtggagaacttt
cacaagtgccggcagcaccaggaggcggaggaggcccggcgtcgggaggagaagcgcctg
agacgcttggagaaaaagcgcaggagtaaggagatatacctgtctgaagcccagcgcagg
ccttactatgccgactattcccccgcacgaaagtacattcacaccctctgcaccagccac
taccttgacctcttcatcaccttcatcattggggtcaacgtcatcacaatgtccatggag
cactacaaccagccaaagtccctggatgaagccctgaagtactgcaactatgtgttcacc
atcgtttttgtgttcgaggcagttctgaagttggtggcgtttggtttccgaaggttcttt
aaggacaggtggaatcaactggatttggccatagttctcttatcaattgtgggaatcact
ctagaggaaattgagatgaatgctgcactacccatcaatcccacaataatacgcatcatg
cgagtgctgagaatagcgagagtgctgaaactgcttaaaatggccactgggatgcgagct
ctcctggacaccgtggtgcaagcgcttccccaggtagggaaccttggcctactttttatg
ctcctgttttttatctatgctgccctgggagtggaattgtttggcaagctagactgcagt
gaagaaaacccttgtgaaggtctgagccgacacgcgactttcaccaacttcggcatggcc
tttctcaccctcttcagggtgtccacaggggacaactggaatgggatcatgaaggacact
cttcgggaatgcactcgggaggacaagcactgcctcagttacctgcccgttatctctcct
gtctactttgtcaccttcgtcctcatcgcacagtttgtcctcgtcaacgtcgtggtggcc
gtgctgatgaagcacttggaggagagcaacaaggaggccaaggaggatgctgagatggat
gctgagattgagttggagatgtccagaggagcgaccaccccagccagctgtgggagcagg
ggaggtgccgtggccccagaaagcagagcaacctacagaagtcaggagaccatgaagttg
gactcagcagtgcaggagacgctgagctgtgagaatgtgtctttagccatcccagactca
gacacgctggagggggcagagactcccgtgatggaaaccccgtccttctgctctgtttcc
caccatgtcctgacaccttcccacaaaaccccaggccaccaggctgagggcggcgccacc
tccctgaggccacaggacactcaaaacctgctgacggttcgcaagatctctgtttcgcgg
atgcactcgctgcccaacgacagctacatgttccggccggtgatgccagcaaaagcccct
ttccccctccacgaggtggagatggagacatacccctgcaaatcccagagagggtccatc
acctccatccgctcccagcccgtgggaacctgctcctccctgcgagtcccagcggagtcg
ctgctcctgccgctccgttctcccaaccacgagggccgtgaccgctggaaggtccttccc
cccaaccttgcgcctcgatctccgaccctcaacaagctgctgtgcagacaggaggccatt
cgaacagactctgtggacgggcatactccggagcgcaaggacagcctgcaagcagagcct
ggagagatgctaccgtccccaaagcatcctcagagcactttcacccccagcccacaccat
cccacagccacgtccctcccgggcacccctccgctctcccccccagcctccccgcaccgc
caccccggcaccctggcacggaagcacagccgcggccagcacagcgtccccagccggcca
cccagcccggacagcagccagcccagccccgagggcggccttttcgagtcctccgacctg
gctgacgaggaggttcggcacatcaacagctcagccaaagactggggaggggaacactcg
aacgctgggagctgctcgacttcgccgttcatctccccggccccatctccagtgcccctc
aagaactgcagcacaacccgcctctccaggggcagcaacaaggagaaagacttgaagaag
ttttacagtattgatccgaagggcttcctcaccaagcccagctgggcagacgaccaaagg
cgacactccattgagatctgcccctccatcggcgacagggactttgaggatgcggctgag
gacaagcagcgctcccctgttcacatccaggcggagtccgagtacatccacggagcccgg
aggaagaagaagatgagcccaccctgcatttctatagatcctcctatggaggacgacggt
ggggcggcctcgcgcaccaaaccctccgagaacagcatgttgcggcgacggaccccgtcc
tgcgagttcccggcgtaccgagagtccctggagctcgcggagagccagcccggggaacca
ggctccaaaacggagcggcggggccagcccccgtgccgtggggagcacctcaccatcccc
aacttctccttcgagcagttggacggcagctcctcgagcagcctctcggatctcctcctg
aacagcggacagtccgcgccagaccccggcgcctccgaactgaaacaaatggatcactta
aaaactcagtggagcaacagcgagaaaagcaaagagctcctaggcggcacaaagagcccc
ctccgcaagcaggacttggtccctgtgactgttgcgacagaagaagatatagatgaccca
gtatag
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integrated database retrieval system
