KEGG   Columba livia (rock pigeon): 102094760
Entry
102094760         CDS       T02912                                 
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
  KO
K12850  pre-mRNA-splicing factor 38B
Organism
clv  Columba livia (rock pigeon)
Pathway
clv03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:clv00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    102094760 (PRPF38B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:clv03041]
    102094760 (PRPF38B)
Spliceosome [BR:clv03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U4/U6.U5 tri-snRNP related factors
    102094760 (PRPF38B)
 Complex C
   U4/U6.U5 tri-SnRNP related factors
    102094760 (PRPF38B)
SSDB
Motif
Pfam: PRP38 PRP38_assoc
Other DBs
NCBI-GeneID: 102094760
NCBI-ProteinID: XP_005499056
UniProt: A0A2I0MEC9
LinkDB
Position
Unknown
AA seq 669 aa
MLPARRLHPSPPRAPYPAARRCLADHSRPSPARPRPSTATGFCVTRYSSRVCRGVCYFSI
GETNAIALVATGSGSSDRAIPRELPAQPSVAFAASDRQATRCLTSRLPDQNQTKWVPNNP
DKAPSYQSEVRREQQRGQRAAQHQPGALPPAQQQLQSGAPKPAASGKQGNVLPLWGNEKT
MNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGG
VRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLW
DWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKTIDQQIKS
RPRKIKKDGKEGMEEIDRHAERRRSRSPRRSISPRRSPRRSRSRSHHREGHGSSSFDREL
ERERERQRLEREAKEREKERRRSRSTDRTLERRRSRSRDRYRSRSRSRDRKGDRRDRDRE
REKENERSRKKERDYDKERGSEREKDRSRERSKERKSKGDIEERRHKDEKDDKKHRDDKR
DSKKERKHSRSRSRERRHRSRSRSKNTGKRSRSRSKEKSSKHKNESKEKSNKRSRSRSRG
RTDSVEKSRKRDQSPSKEKSRKRSRSKERSHKHDHSDSKDHSDKHEHRRSQSTEPESQEK
QQKNKDETA
NT seq 2010 nt   +upstreamnt  +downstreamnt
atgctcccggcccgcaggctgcacccaagccctccccgggctccctacccagcagcccgg
cgctgcctcgccgaccacagccgccccagcccggcccgtccccggccctcgaccgccacc
gggttctgtgtgactcggtacagctcccgtgtctgcagaggagtttgttatttctccata
ggagaaactaatgctattgcgctggtagcgacagggtcaggatccagcgacagggcaata
ccacgggagctccctgcccaaccgagcgtggctttcgccgcgtctgaccggcaggctacc
agatgcctgaccagcaggctaccagaccagaaccagaccaagtgggtacccaacaatcca
gataaagcaccttcttaccagtcagaggtccgtcgtgagcagcagagggggcagcgggcg
gcccagcaccagccgggcgccctcccgccggcccagcagcagctgcagagcggagccccc
aagccggcggcctcgggcaagcagggcaatgtgctgccgttgtgggggaacgagaagacc
atgaacctgaaccccatgatcctcaccaacatcctttcgtcgccgtacttcaaggtgcag
ctctacgagctcaagacgtaccatgaggtggtggacgagatctacttcaaggttacgcac
gttgaaccgtgggaaaaggggagcagaaaaacagcaggccagacagggatgtgtggaggg
gtgcgaggtgttggaactggaggaattgtgtctactgccttttgtctgctctacaaatta
tttacactgaaactcactcgtaagcaagtgatgggccttataactcatacagactctcca
tatattagggctcttggatttatgtatattaggtacacacagccacctacagatctatgg
gactggtttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggtggtggt
tgtgttatgaccatcggggagatgcttcgttccttcctcactaagctggaatggttttcc
acgttgtttccaagaattcctgtgccagtccagaaaaccattgaccagcaaattaaaagc
agacctagaaaaatcaagaaagatggcaaggagggaatggaagaaatagaccggcatgca
gaacgtagacgttcaaggtctccaagacgatccatcagtcccaggaggtctcccagaaga
tccagaagcagaagtcatcatcgggaaggccatggatcatccagttttgatagagagcta
gaaagagaaagagaacggcagagattagaacgtgaagctaaggagagagaaaaagaaagg
cggagatctcgaagcactgatcgcacactagaacggaggcgaagcagaagcagggacaga
tacagaagccgtagtcgaagtcgtgacaggaaaggagatcgaagagacagggatagagag
cgagagaaagaaaatgaacggagccggaaaaaagagagagattacgataaggaaagaggt
agtgagagggaaaaagatagatctagagaaagatcgaaagaaaggaaaagtaagggtgat
atagaagaaagacgacacaaagatgaaaaggatgacaagaaacacagagatgacaagagg
gattccaaaaaagagagaaaacatagtagaagtcgaagccgggaaagaaggcataggagc
aggagccgaagtaagaatacaggtaagcgcagcagaagcaggagcaaagagaaatcaagt
aaacataaaaatgaaagtaaagagaagtcaaataaacgaagtagaagcagaagcagagga
agaacagatagtgttgagaagtccagaaaacgagaccagagtcccagcaaagaaaaatct
aggaaacgtagcagaagcaaagaacgttcccacaaacacgatcacagtgacagcaaggac
cattcggacaaacacgagcatcgaaggagccaaagtacagaaccagagagccaagaaaag
caacagaaaaacaaagatgagactgcgtga

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