Columba livia (rock pigeon): 102094760
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Entry
102094760 CDS
T02912
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B
KO
K12850
pre-mRNA-splicing factor 38B
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102094760 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clv03041
]
102094760 (PRPF38B)
Spliceosome [BR:
clv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
102094760 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
102094760 (PRPF38B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
102094760
NCBI-ProteinID:
XP_005499056
UniProt:
A0A2I0MEC9
LinkDB
All DBs
Position
Unknown
AA seq
669 aa
AA seq
DB search
MLPARRLHPSPPRAPYPAARRCLADHSRPSPARPRPSTATGFCVTRYSSRVCRGVCYFSI
GETNAIALVATGSGSSDRAIPRELPAQPSVAFAASDRQATRCLTSRLPDQNQTKWVPNNP
DKAPSYQSEVRREQQRGQRAAQHQPGALPPAQQQLQSGAPKPAASGKQGNVLPLWGNEKT
MNLNPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGG
VRGVGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLW
DWFESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKTIDQQIKS
RPRKIKKDGKEGMEEIDRHAERRRSRSPRRSISPRRSPRRSRSRSHHREGHGSSSFDREL
ERERERQRLEREAKEREKERRRSRSTDRTLERRRSRSRDRYRSRSRSRDRKGDRRDRDRE
REKENERSRKKERDYDKERGSEREKDRSRERSKERKSKGDIEERRHKDEKDDKKHRDDKR
DSKKERKHSRSRSRERRHRSRSRSKNTGKRSRSRSKEKSSKHKNESKEKSNKRSRSRSRG
RTDSVEKSRKRDQSPSKEKSRKRSRSKERSHKHDHSDSKDHSDKHEHRRSQSTEPESQEK
QQKNKDETA
NT seq
2010 nt
NT seq
+upstream
nt +downstream
nt
atgctcccggcccgcaggctgcacccaagccctccccgggctccctacccagcagcccgg
cgctgcctcgccgaccacagccgccccagcccggcccgtccccggccctcgaccgccacc
gggttctgtgtgactcggtacagctcccgtgtctgcagaggagtttgttatttctccata
ggagaaactaatgctattgcgctggtagcgacagggtcaggatccagcgacagggcaata
ccacgggagctccctgcccaaccgagcgtggctttcgccgcgtctgaccggcaggctacc
agatgcctgaccagcaggctaccagaccagaaccagaccaagtgggtacccaacaatcca
gataaagcaccttcttaccagtcagaggtccgtcgtgagcagcagagggggcagcgggcg
gcccagcaccagccgggcgccctcccgccggcccagcagcagctgcagagcggagccccc
aagccggcggcctcgggcaagcagggcaatgtgctgccgttgtgggggaacgagaagacc
atgaacctgaaccccatgatcctcaccaacatcctttcgtcgccgtacttcaaggtgcag
ctctacgagctcaagacgtaccatgaggtggtggacgagatctacttcaaggttacgcac
gttgaaccgtgggaaaaggggagcagaaaaacagcaggccagacagggatgtgtggaggg
gtgcgaggtgttggaactggaggaattgtgtctactgccttttgtctgctctacaaatta
tttacactgaaactcactcgtaagcaagtgatgggccttataactcatacagactctcca
tatattagggctcttggatttatgtatattaggtacacacagccacctacagatctatgg
gactggtttgaatcctttcttgatgatgaagaggacctggatgtgaaggcaggtggtggt
tgtgttatgaccatcggggagatgcttcgttccttcctcactaagctggaatggttttcc
acgttgtttccaagaattcctgtgccagtccagaaaaccattgaccagcaaattaaaagc
agacctagaaaaatcaagaaagatggcaaggagggaatggaagaaatagaccggcatgca
gaacgtagacgttcaaggtctccaagacgatccatcagtcccaggaggtctcccagaaga
tccagaagcagaagtcatcatcgggaaggccatggatcatccagttttgatagagagcta
gaaagagaaagagaacggcagagattagaacgtgaagctaaggagagagaaaaagaaagg
cggagatctcgaagcactgatcgcacactagaacggaggcgaagcagaagcagggacaga
tacagaagccgtagtcgaagtcgtgacaggaaaggagatcgaagagacagggatagagag
cgagagaaagaaaatgaacggagccggaaaaaagagagagattacgataaggaaagaggt
agtgagagggaaaaagatagatctagagaaagatcgaaagaaaggaaaagtaagggtgat
atagaagaaagacgacacaaagatgaaaaggatgacaagaaacacagagatgacaagagg
gattccaaaaaagagagaaaacatagtagaagtcgaagccgggaaagaaggcataggagc
aggagccgaagtaagaatacaggtaagcgcagcagaagcaggagcaaagagaaatcaagt
aaacataaaaatgaaagtaaagagaagtcaaataaacgaagtagaagcagaagcagagga
agaacagatagtgttgagaagtccagaaaacgagaccagagtcccagcaaagaaaaatct
aggaaacgtagcagaagcaaagaacgttcccacaaacacgatcacagtgacagcaaggac
cattcggacaaacacgagcatcgaaggagccaaagtacagaaccagagagccaagaaaag
caacagaaaaacaaagatgagactgcgtga
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