Columba livia (rock pigeon): 102095052
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Entry
102095052 CDS
T02912
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein isoform X1
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03440
Homologous recombination
clv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
102095052 (BRIP1)
03460 Fanconi anemia pathway
102095052 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clv03400
]
102095052 (BRIP1)
Enzymes [BR:
clv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
102095052 (BRIP1)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
102095052 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
102095052 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD_2
Helicase_C_2
DEAD
ResIII
HBB
Motif
Other DBs
NCBI-GeneID:
102095052
NCBI-ProteinID:
XP_021156104
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MSSDVSEYTIGGVKIRFPCKAYPSQLAMMNAIVKGLNNRQHCLLESPTGSGKSLALLCSA
LSWQQSLYGKLVLTSSCEKEEGKPESSLPCRCACHSQSKSNEAATSVNPGASCSSSNYET
GSSVKPGSPLTNTGCKENETLASKLSAKKRLSVCNSENDDFQVDRKRIRPLETEQQQVRK
RHCFAKGVQMVDALEVYQQRKNGELVVHSEKSVKTATSAPRTSSGPCTECSCSSGKETDK
DTSNTKKKESGDQSFIPKIYFGTRTHKQISQITRELKRTAYSSVPMTILSSRDYTCIHPV
VSNSGSNRNEMCVELLEGKHGKSCLYYHGVHKVSEHHGLQSAHNMSQAWDIEDLVHLGKK
LRACPYFAARELMVGADIVFCPYNYLLDPQIRESMDINLKGHVVILDEAHNIEDSARESV
SYGVTENQLRAAQEELDFMVNNNIRQMDHGPLRAVCCSLTNWLRESSSQLVERGYETSCK
VWSGKEMLPILHQMGITGITFPILQKHLATVLEKEEKISVLGREELIEIPVVSPATQIVL
KGLFMVLLFLFKDNSRYADDYRVALQQTYAWMNENQPDVSETSALVTRPRHKRNLRQKTM
VHVLNFWCLNPAVAFSDLSDVRTIVLTSGTLSPMDSFSSELGVKFSIQLEANHIIRNSQV
WVGTVGAGPNRRKLCATFQHTETFEFQDEVGALLLSVCQTVGQGILCFLPSYKLLDKLKD
RWMHTGLWRNLELVKTVIAEPQGGAKSDFDELLKIYYDAIKCKGERDGALLIAVCRGKVS
EGLDFCDENARAVITIGIPFPNVKDLQVELKRKYNDQHKNTRGLLPGSQWYEIQAYRALN
QALGRCIRHRNDWGALILVDDRFRNNPNKYITGLSKWIRQQIQHHENFSSALESLQAFAT
RNQKGIDALSECSSEFPHVPSNSKDLSQASQQEATIHLSPDVPAKGGQKVDVETHSHHVT
QRRKHMDSTPRMPTTKTERERRNGGTNADIMKEHCCFKPLTSTPLPEAKNCVSTANSKQK
NVARAGELIDSVNQCQSSLISEQKPSAPESCLETTDVSLKNPEAAVAEERSRELQLPVEP
CSEFPAAGGKPELSVLNGSAEAEEEDESIYFTPELYDDAETEDEEIKPLVPTCNANENQT
KCGHSTAATDVFAINTSETLNVAKKEMGDGRSASLHGVMHNEGSKNSAVNNAEMTSETEA
GQVASQEMDTKKRKISLSRSRNKGASSSLLNNSGS
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgtcttctgatgtgtcagaatatactatcgggggagtcaagattagattcccttgcaag
gcatatccttcacagcttgctatgatgaatgctattgtcaagggcttaaataacaggcag
cactgtttgttggagagccctacgggaagtggcaaaagcttggcattgctttgttctgcg
ttatcatggcagcagtctctgtatgggaaattagtgctcacatcgtcatgtgaaaaggaa
gagggaaagccagagagctccctgccctgtcgctgtgcgtgtcattcccagtcaaagagc
aacgaggccgcaacgagtgtgaatcctggtgcttcttgttcttctagtaattatgaaaca
ggcagttctgtaaaacctggaagcccactgacaaatacaggatgtaaagaaaatgaaacg
ttagcttcgaaattgtcagccaaaaaaaggttatctgtgtgtaacagtgagaatgatgat
tttcaagtggacaggaaaaggattcgccctttagaaactgagcagcagcaggttagaaaa
cgtcattgttttgcaaaaggagtccagatggttgatgccttggaagtctatcaacagagg
aaaaatggagagctggttgtgcactctgaaaaaagtgtgaaaaccgcgacttctgctccc
agaacatcttcaggtccttgcactgaatgttcctgttcttctggaaaagaaactgataaa
gatactagtaacacaaagaagaaagaaagtggagatcagtcgttcattcctaaaatatat
tttggaacgcgcacacacaagcaaatatcccagattactagagagttgaagagaacagcg
tattccagtgtccccatgacaattctttctagccgggattacacctgtattcacccagtg
gtatctaatagtggtagtaacaggaatgaaatgtgtgtagaattgctggaaggaaaacat
ggcaagtcctgtctttactatcacggtgttcacaaagtcagcgagcaccatggcctgcag
tctgcacacaacatgtcccaggcctgggacattgaagatctcgtgcacctgggaaagaag
cttcgtgcttgtccatattttgcagccagagaactcatggtgggcgcagatattgtgttt
tgtccttataattatctcctggacccgcagatacgggagagtatggatattaacctgaaa
ggccacgtagtcattttagacgaagcccataatattgaggactctgctcgggagtcagtg
agctacggagttacagaaaatcaactgagagctgctcaagaagagcttgatttcatggtc
aataacaacatcaggcagatggaccatgggcccctccgggctgtgtgctgctctttgaca
aactggttacgggagagctctagtcaactggtagaaagaggatatgaaacctcctgtaag
gtttggagtggaaaagaaatgctccctattttacaccaaatgggaatcactggtattact
tttcccattttacagaaacatcttgctactgttctggaaaaagaagaaaaaatatcagtg
cttggtagagaggaacttattgagataccagttgtgagccctgccactcagattgtgctg
aaagggttattcatggtgcttttatttctttttaaagataatagcaggtatgcagatgac
tacagagttgctctacagcaaacctatgcctggatgaatgaaaaccagcctgatgtttca
gagacaagcgccttggttacaaggcccaggcataaaaggaatttgcggcagaaaaccatg
gtccacgtgcttaatttttggtgcttgaatcctgctgtggcattttcagacttaagtgat
gttagaacaattgttctgacatctgggacactctccccaatggattcattttcttcggaa
cttggtgtgaagttttctattcagttggaggcaaatcacattattcggaactcacaggtt
tgggttggcaccgtgggagcgggcccgaaccggcggaagttgtgcgcaacgttccagcac
acggagacctttgagttccaggatgaggtgggagctctcctgctgtccgtctgtcagacc
gtcggccaaggaattctctgctttttgccatcctataagctcttggacaaattaaaagat
cgctggatgcacacggggttatggagaaacctggagctggttaaaacagttattgctgag
cctcaaggaggggcgaagagtgacttcgatgaactgctgaaaatatactacgatgcaata
aaatgtaaaggagaaagagatggagcgctcctcatagccgtatgcagaggaaaagtcagc
gaaggcttggatttctgcgatgagaacgcccgtgcggttataaccattggtattccattt
ccaaatgtgaaagacctgcaggttgaattaaagaggaagtacaatgaccagcacaaaaat
acaagaggccttttaccagggagccagtggtatgaaattcaagcttatagggctctgaac
caagccctgggaaggtgtataagacataggaacgactggggtgctctgattttagttgat
gatcgcttccggaataacccaaataagtacataactggattatctaaatggattcgtcaa
caaatccagcaccatgaaaatttcagtagtgcactcgaatccttgcaagcattcgctaca
agaaaccagaaaggcattgatgctttgtcagagtgcagcagtgaatttccccatgtacct
tcaaactcaaaagacctgtctcaagcctctcaacaggaggcaacgattcatctgtcacca
gatgttcctgctaaaggtggccagaaagttgatgtagagactcattctcaccatgtaaca
caaagacgaaaacatatggactccacacccagaatgccaacaactaaaacagagagagaa
agaaggaatggggggactaatgcggatattatgaaggaacattgctgctttaaaccactg
acttcaacacctctgcctgaagccaagaactgtgtgtccacagcgaacagcaaacaaaag
aatgtggctagggctggtgaacttattgacagtgtaaatcaatgccagtcatcattaatt
tccgaacagaaaccaagcgcaccagaatcgtgtttagaaacaactgatgtttcacttaaa
aaccctgaggccgcagttgctgaagagcgttcgcgtgagctccagcttccagttgagccc
tgcagtgagttccctgcagcaggagggaaacctgaactttcagtgttaaacggatctgca
gaagctgaagaggaggacgagagtatctacttcacacctgaactctatgatgatgcagaa
acagaggatgaggagatcaaaccactggttccaacctgtaatgcaaatgagaatcagact
aaatgtgggcacagcacagctgctactgatgtctttgcaattaacacctcagaaacacta
aatgtagctaaaaaagagatgggtgatggcagaagcgcaagtttacatggagtaatgcac
aacgaggggagtaagaatagtgcggttaataatgcagagatgactagcgaaacagaagca
gggcaggtagcatctcaggagatggacaccaagaaacggaagatcagtctttccagatca
cgaaataaaggtgcgtcgtcttctctgttgaacaacagtggctcgtag
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