Columba livia (rock pigeon): 102095090
Help
Entry
102095090 CDS
T02912
Name
(RefSeq) protocadherin-11 X-linked isoform X1
KO
K16498
protocadherin delta 1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102095090
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clv01009
]
102095090
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clv04515
]
102095090
Protein phosphatases and associated proteins [BR:
clv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102095090
Cell adhesion molecules [BR:
clv04515
]
Cadherins
Protocadherins
102095090
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_2
Cadherin_CELSR2_9th
K319L-like_PKD
Cadherin_4
Fibulin_C
TMEM154
Motif
Other DBs
NCBI-GeneID:
102095090
NCBI-ProteinID:
XP_021150686
LinkDB
All DBs
Position
Unknown
AA seq
1262 aa
AA seq
DB search
MDLLSGTYLLAVLLACIVFQSGAQEKNYTVREELPENVLIGNLLKDLNLTLDPDAPLSSP
LQFKLVYKTGDVPLVRVEENTGEIFTTANRIDREKLCAGIFSENRCFYEVEVAVLPDEVF
RLVKIRFLIEDINDNAPLFPSTVINISIPENTAINSRYSVPSAIDPDIGVNGIQHYELLK
PKTAPKRTFGSITNEQGQNVFGLDIIETPEGDKWPQLIVQQILDREQKDTYVMKIKVEDG
GSPPRSSTAILQVTVTDVNDNRPVFKENDIEVSVPENAPVGTSVSQLHATDADLGSNAQI
HFYFSNQISSLAKRLFAIDNTTGLITIREPLDREESPVHKLTVLASDGSSTPSRATVTVN
VTDINDNVPSIDTRYIINPVNGTVLLSEKAPLNTKIALITVMDKDADLNGKVTCFTDHDV
PFRLKPVFDNQFLLETATFLDYEATREYAIKIVASDSGKPPLNQSAMLLIKIKDENDNAP
VFTQPIIGLSIPENNAPGTQLTKISATDADSGRNAEISYILGSDAPPIFNLDRRTGILTA
VRKLDREKQDRYSFTVLAKDNGMPPLQTNATVTVSVLDQNDNSPAFTHNEYNFYVPENLP
MYGTVGLITVTDADSGENAAVTLSILNGRDNFIIDPLTGVIRPNITFDREHQGSYTFQVK
AVDGGRLQRSSTAKVTINVVDVNDNRPVFVIPSSNYSYELVPTSASPGSVVTKVFAVDND
TGMNAELRYSIIGGNSRGLFTIDQLTGNITLKEKVITSDHGLHRLVIKVNDLGQPESLYT
IALVHLFVNETVTNSSYVQELVRRNMETPVGQNIGDGEITPQTNDYVKIIIAIIAGTMTV
ILVIFVTALVRCRQTPRHKVVQKNKQSGEWVSPNQENRQIKKKKKKKKRSPKSLLLNFVT
IEESKPDDPGHEHINGTLDIPVELEEQTMGKYNWATTPTTFKPDSPDLAKHYKSASPQPT
FQIKPETPVPPKKHHVIQELPLDNTFVVGCDSLSKCSSSSSDPYSVSECSCQGGFKTPGP
IHTRQHTKEVGRPQTPLKETTLEPWTQPQEQNCGGKCFVPAVPANQPQRRVTFHLPDGSQ
ESCSDSGLGDHEPASGASTSHPLPLGFPRDEYYEQASPNSRTEGDGNSDPESTIEINLQK
ALAEASETCTQECLILGHSDNCWMPPSLTQYQQSNTPLPSFGFQQGWGRGARPEGRHTLG
RPLPKDDSDKGQGGPRPQFYNTCERHCASEDPVKVIPLANFAAAHQAPVSGSSATFVHEH
QL
NT seq
3789 nt
NT seq
+upstream
nt +downstream
nt
atggacttgctgtctggaacctacctcttggcagtcttattagcctgtattgtatttcag
tctggcgcacaggagaagaattatacagtgcgggaagaactgcctgaaaatgtcctcatt
ggcaatttgctcaaggatcttaacctaacgctggacccagatgcgcccctttcctcaccg
ctacagttcaagcttgtgtataagactggggatgtaccattagtacgggtggaggagaac
actggtgagatattcacaactgcaaaccgcatagaccgagagaagctgtgcgctggcatc
tttagtgagaaccgctgcttttatgaagtggaggttgctgttttacctgatgaagttttc
agactggtcaagatcagattcctaatagaggatataaatgacaatgctcccctcttcccc
tcaacagttattaacatctctatccctgaaaacacagcaattaattctcgttattctgtc
ccatctgccatcgatccggacattggtgtgaatggcattcaacattatgaactccttaag
cccaaaacagctccgaaaaggacatttggatccattacaaatgagcagggtcaaaatgta
tttggtcttgatataattgagacacctgagggagataagtggcctcaactgattgtccaa
cagatcctggacagggagcagaaggatacctatgtgatgaaaattaaagttgaagatggt
ggaagccctccgagatctagcactgccatccttcaggtcacggtgactgatgtgaatgat
aatcgcccagtcttcaaagagaacgacattgaagttagtgttccagaaaatgctccagtg
ggcacctctgtttctcagctccatgccactgatgcagacctgggctcaaatgcacaaatc
cacttctatttcagcaatcagatctccagtttggccaaaaggctgtttgccattgataac
accactggtctcatcactataagagaaccactagacagggaggaatctcctgtgcacaaa
ttaactgttttggcaagtgatggcagttcaactccatcaagagcaacagtgactgttaac
gtcacagatattaatgacaatgtcccatcaatagacacaagatacattatcaatccagtg
aacgggacagtgcttttgtctgagaaggctccccttaatacaaaaattgcattgataaca
gtaatggacaaggatgctgatctgaatggaaaagttacttgttttacagatcatgatgtc
ccttttaggctaaagccagtgtttgataatcagtttctcctggagacagccacatttcta
gattatgaagccacacgggaatatgccattaaaatagtggcttcagattcagggaaacct
cccctaaaccagtctgcaatgctcctgatcaaaattaaagatgaaaatgacaatgcccca
gtttttacacagcctatcataggtctttccatccctgaaaacaacgctcctggtactcag
ctaaccaagataagtgctacggatgctgacagtgggcgcaatgctgagattagctatatc
ttgggttctgatgcaccccctattttcaacctcgaccgccgcacgggcattctgacggca
gtgagaaagctggacagagaaaagcaagacaggtactccttcactgtgttggctaaggat
aatgggatgccacccttgcagaccaatgctactgtgacagtgtctgtcctggaccagaat
gataacagccctgctttcacacataatgaatataatttctatgtgccagaaaatttaccc
atgtatggcacagtggggctcatcacagttacagatgctgactctggagagaatgctgcg
gtcactctctcgatattaaatggtagagataatttcattatagatccacttactggtgtg
ataagacctaatattacctttgatagggaacaccaggggtcatatactttccaggtgaaa
gctgtggatggaggaagactgcagcgttcctcaacggccaaggtgaccatcaatgttgtt
gatgtaaatgacaacaggcctgtttttgttattccttcatctaattattcttatgagttg
gttccaacatctgccagtccagggtctgtagttactaaagtctttgcagttgataatgac
acaggaatgaatgcagagctccgctatagcatcataggtgggaactcaaggggcttattt
acaattgaccaattaacaggaaatattactttgaaagagaaggtaattacatcagatcat
ggcttgcacagactggtgataaaagtcaatgacctaggacagccggagtctctttatact
atagctcttgtgcatttgtttgtgaatgagacagtcaccaatagttcctatgtacaagag
ctggtgcgcaggaacatggaaactccagttggccagaatattggggatggtgagataact
ccacaaaccaacgattatgtcaagatcatcattgccattattgcaggcactatgacagtt
attctggtaatttttgttactgctttagtacggtgccgtcagacgcctaggcacaaggtt
gtccaaaagaacaagcagagtggtgaatgggtttccccaaaccaagagaataggcagatc
aagaaaaagaagaagaagaagaagcgctccccaaaaagcctcctcctcaactttgtgact
attgaagaatcaaagcctgatgatcctggccatgagcacataaatggcactttagacatt
cccgtagagctagaagaacagactatgggaaaatataactgggccaccacaccgaccaca
tttaagccagatagcccagatttagcaaagcactacaagtctgcttctccacagcctacc
tttcaaattaaacctgagacccctgtaccccccaagaagcaccacgtcattcaggaactg
cctctagataacacctttgtggtgggttgtgactcactctccaagtgctcatccagcagc
tcggacccttacagtgtttctgaatgcagctgtcaaggaggcttcaagacaccgggcccc
atacacaccagacagcacacaaaagaagtgggaaggccgcaaactcctttgaaagagaca
accttggagccttggactcaaccacaggaacaaaactgtggaggaaagtgctttgtccca
gcagttcctgctaatcagcctcagcgtcgcgtcacatttcacctaccagatggttcccag
gaaagctgcagtgacagtgggcttggggaccacgaacctgccagcggtgccagcacatcg
caccccctgcccctcggcttcccccgggacgagtactatgagcaggcgtcacccaacagc
cggacagaaggagacggcaactcagaccccgagtccactatcgaaataaatctccagaaa
gccctggctgaagcctctgaaacctgcacacaggagtgtctcatcctgggccattccgac
aactgctggatgccaccgtctttgacgcagtaccagcagtccaacacccctttgccatca
tttggcttccagcaaggctggggccgaggagccaggcctgagggacgacacactcttggg
aggccccttccaaaggacgacagtgacaaaggccagggtgggcccaggccccagttctac
aacacctgcgaaagacattgcgccagcgaagaccctgtcaaagtcattcctctggcaaac
ttcgccgcggcccaccaggcaccagtgtctgggagcagcgctacgtttgtacatgagcac
cagctataa
DBGET
integrated database retrieval system
