Columba livia (rock pigeon): 102095178
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Entry
102095178 CDS
T02912
Symbol
PMS2
Name
(RefSeq) mismatch repair endonuclease PMS2
KO
K10858
DNA mismatch repair protein PMS2
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03430
Mismatch repair
clv03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
102095178 (PMS2)
03460 Fanconi anemia pathway
102095178 (PMS2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clv03400
]
102095178 (PMS2)
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
102095178 (PMS2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MutL_C
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
102095178
NCBI-ProteinID:
XP_021138297
LinkDB
All DBs
Position
Unknown
AA seq
939 aa
AA seq
DB search
MAPGRQRLRAAGRIQSVPDTARRLKSTRPGCRCFTNPWGAGCPSLRGAGARGGVPPADTA
LLSCPCLPSAAPGGAIRPIDRRSVHRICSGQVVLNLGTAVKELVENSLDAGATNIDIKLK
DHGAELIEVSDNGDGVEEENFEGLTLKHYTSKIQDFSDLIHVETFGFRGEALSSLCALSD
VTIFTCHKSAKVGTRLVFDHSGKIIQKTPFPRQQGTTVNVQQLFYTLPVRHKEFQRNIKK
EYAKMVQVLQAYCIVSKGVRINCTNQVGQGKKCCVVSTAGSPSLKENIGAVFGQKQLQSL
IPFVQLPPNEAVCEEYGLSATDVPQNLYSITGFISRCDHGVGRSTTDRQFFFINQRPCDP
AKVVKLVNEVYHLYNKHQYPFVVLNICVDSECVDINVTPDKRQILLQEEKLLLAILKASL
TEMFGSDVNKLNVNQKLLDVAGNLKKTLPEESEKPRVEVLPDSDTENPGGEGKRVMTLAR
LRESFSLHQTTESSFRSPEKVKQQHNSSRQMSLDTTWSTVKTQKAVLSKGSESCCKMDSK
LSIPSRHLRKLEDNTDSGFCGTCEADAGCSTPEPGSCVSGGSLINPPEEEWCSSEEQLQN
ECPKTVGCSEKLLECDIQVLGTEPKFSQVSDWTNQNKVTQEANSSSPRVKRFKSCRFESE
AADFQAGKSPEVTNSRNYVPSVDVLVEVNKKTVPLEFSMKVLAEKVKKVIQQQQKSTEAQ
NYRRFKAKISPGENKVAEDELRKEISKEMFAKMEIIGQFNLGFIIAKLNSDLFIIDQHAT
DEKYNFEMLQQHTVLQGQKLIAPQNLNLTAVNETVLIENLEIFRKNGFDFVINENAPATQ
KVKLVSLPTSKNWTFGAQDIDELIFMLSDCPGAMCRPSRVRQMFASRACRKSVMIGTALS
VQEMRKLVTHMGEIEHPWNCPHGRPTMRHVVSLDLISSG
NT seq
2820 nt
NT seq
+upstream
nt +downstream
nt
atggcgccaggccgacaacggctccgagcagctggaagaattcaaagcgttcctgacact
gcaaggaggctgaagtcaactcgaccggggtgtcggtgttttacaaacccatggggggcg
gggtgtcccagcctgagaggagcgggggcgaggggaggtgtcccgcccgctgacactgcg
ctgctgtcctgtccctgccttcccagcgccgcgcccggcggggccatccggcccatcgac
cgccggtccgttcaccggatctgctcgggacaggtggtgctgaacctcggcactgctgtg
aaggagctggtggaaaacagcctggatgctggagctaccaacatcgatataaaacttaaa
gatcatggagcagaactgatagaggtttcagataatggagatggagtggaagaggaaaac
tttgaaggcctgactctgaaacattatacatcaaagatacaagatttttctgatctaata
catgttgaaacatttgggtttcgaggtgaagctctgagttcactgtgtgcattgagtgat
gttaccatttttacttgccataagtctgcaaaggttgggactcgtttggtatttgatcac
agtggtaaaatcattcagaaaactccttttccacgacagcaaggaacgactgttaacgta
cagcagttattttatactttgccggtgcggcataaggaatttcagagaaacattaaaaag
gaatatgccaaaatggtccaggtattgcaggcatactgcattgtttcaaaaggagtgcga
attaactgcactaatcaagttggccaagggaaaaaatgttgtgtggtatcaactgctgga
agtcctagtttaaaggaaaacattggagcagtatttgggcaaaaacagttgcagagcctt
attccttttgttcagctacctcctaacgaagctgtttgtgaagaatatggactcagtgct
actgacgtgccacaaaatctttatagtatcacaggcttcatttctcgttgtgatcacggt
gttggaaggagtacaacagacagacagtttttctttatcaaccagcgtccatgtgatcca
gcaaaggttgtcaagcttgtgaatgaagtttatcacttgtacaataaacaccagtatcca
tttgttgtccttaacatttgtgtggattccgaatgtgttgacatcaatgtaactcccgac
aaaaggcaaattttacttcaggaggaaaagcttttattagcaattttaaaagcttccctg
acggagatgtttggtagtgatgttaacaagctgaatgtcaatcagaaactgctggacgtt
gcaggcaacctgaagaagacgcttcctgaagagtcagaaaagcctcgggtagaagtgctg
cctgactctgatactgaaaatccaggtggtgaaggaaaaagagtgatgactcttgccaga
ttaagggagtcgttctccctacatcaaacaacagagagtagttttcgaagccctgaaaag
gtgaaacagcagcacaattcctctagacaaatgtcacttgataccacttggagtactgta
aagactcaaaaggctgtcttgagtaagggatctgagagttgttgtaagatggactcaaag
ttgtcaattccaagcagacatttgagaaaattagaagataatacggattctggattctgt
ggcacttgtgaggcggatgctggatgtagcacgccggaacctgggagctgcgtcagtggt
ggaagcctgattaatcctcctgaagaagaatggtgtagctcagaagaacagcttcagaat
gaatgtcctaaaactgttgggtgtagtgagaaattattggaatgcgatattcaggtcttg
ggcactgaaccgaagttcagtcaagtgagtgactggactaatcagaataaggtaactcaa
gaagccaatagttcttccccaagagtaaaacgttttaaaagctgtaggtttgaaagtgaa
gcagctgacttccaggcaggtaaatctcctgaagtgacgaattcgaggaactacgtgcca
agtgttgatgtactggtggaagttaacaagaaaactgttccactggagttctctatgaag
gtcttagcagaaaaggtaaaaaaggtaatacagcaacaacagaaaagtacagaagcacag
aattacagaagatttaaagcaaaaattagtcctggagaaaataaagtagcagaagatgaa
ttaagaaaagagatcagtaaagaaatgtttgcaaaaatggaaatcattggccagttcaat
ttagggtttataatagcaaagctgaattctgatcttttcataattgaccaacatgctact
gatgagaagtacaactttgagatgttacaacagcacactgttcttcaaggtcagaagctg
atagcgcctcagaatctcaatttaactgctgtaaatgaaactgtattgattgaaaacctg
gaaatattcagaaaaaatgggtttgattttgtcataaatgaaaatgctcctgcaactcaa
aaagttaaattagtatcgttgccaacgagcaaaaactggactttcggtgcacaagacata
gatgagctgatcttcatgctgagtgactgcccgggggccatgtgcaggccctcccgggtc
agacagatgtttgcttctcgcgcgtgcagaaagtctgtgatgattggaactgcgctgagc
gtgcaggaaatgagaaaactcgtcacccacatgggggagatcgagcatccctggaactgc
ccccacgggaggccgacgatgagacacgtcgtcagtttagacttgatttcgtcaggataa
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