Columba livia (rock pigeon): 102095768
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Entry
102095768 CDS
T02912
Symbol
TRIP12
Name
(RefSeq) E3 ubiquitin-protein ligase TRIP12 isoform X1
KO
K10590
E3 ubiquitin-protein ligase TRIP12 [EC:
2.3.2.26
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102095768 (TRIP12)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
clv04121
]
102095768 (TRIP12)
Enzymes [BR:
clv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102095768 (TRIP12)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
HECT type E3
102095768 (TRIP12)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HECT
TPR_TRIP12_N
WWE
UNC45-central
HEAT_2
HEAT_Maestro
Motif
Other DBs
NCBI-GeneID:
102095768
NCBI-ProteinID:
XP_021147834
LinkDB
All DBs
Position
Unknown
AA seq
2055 aa
AA seq
DB search
MSNRPNNNPGGSLRRSQRNTAGAQPQDDAVGGRSHLGQAKHKAHSPPESRKSISKTPKVQ
SNTTSEQSKGHFSKRGCSSSALLIPQEDPERVNTSDKQKTGQVLKKDNSRGVKRSASPDY
RRTNSPSSAKKPKALQNTEPSLESNKPHTKSKRRHLDQEQPKSTQLPSTSKAHTRKGGAV
GSSRSQKRKRTENLSCIGAEEKSAKLSKLASKSVTSAKAGCSTITDSSSSASTSSSSSAV
ASASSTVPQGARVKQGKDQNKARRSRSASSPSPRRSSRDKEPSKTSGSSKFDWAARFSPK
VSLPKTKLSLPGSSKSETSKPGPSGLQAKLASLRKSTKKRSESPPAELPSLRRSTRQKTT
GSCASTSRRGSGLGKRGAAEARRQEKMADPDNNQDGVNSSAARTDEAPQGAAASSSVAGA
VGMTTSGESESDDSEMGRLQALLEARGLPPHLFGPLGPRMSQLFHRTIGSGASSKAQQLL
QGLQATDESQQLQAVIEMCQLLVMGNEETLGGFPVKSVVPALITLLQMEHNFDIMNHACR
ALTYMMEALPRSSAVVVDAIPVFLEKLQVIQCIDVAEQALTALEMLSRRHSKAILQAGGL
ADCLLYLEFFSINAQRNALAIAANCCQSITPDEFHFVADSLPLLTQRLTHQDKKSVESTC
LCFARLVDNFQHEENLLQQVASKDLLTNIQQLLVVTPPILSSGMFIMVVRMFSLMCSNCP
TLAVQLMKQNIAETLHFLLCGASNGSCQEQIDLVPRSPQELYELTSLICELMPCLPKEGI
FAVDTMLKKGNAQNTDGAIWQWRDDRGLWHPYNRIDSRIIEAAHQVGEDEISLSTLGRVY
TIDFNSMQQINEDTGTARAIQRKPNPLANTNTSGHSELKKDDARAQLMKEDPELAKSFIK
TLFGVLYEVYSSSAGPAVRHKCLRAILRIIYFADAELLKDVLKNHAVSSHIASMLSSQDL
KIVVGALQMAEILMQKLPDIFSVYFRREGVMHQVKNLAESEALLTSPPKVCTNGSGTLGT
TTISTGTATAASNAAADLGSPSLQHSREDSLDLSPQGRLSDVLKRKRLPKRGPRRPKYSP
PRDDDKVDNQAKSPTTTQSPKSSFLASLNPKTWGRLSTQSNSNNIEPARTAGVSGLARAA
SKDTISNNREKIKGWIKEQAHKFVERYFSSENMDGSNPALNVLQRLCTATEQLNLQVDGG
TECLVEIRSIVSESDVSSFEIQHSGFVKQLLLYLTSKSEKDAVSRDIRLKRFLHVFFSSP
LPGEEPLGRLEPLENAPLLALVHKMNNCLSQMEQFPVKVHDFPSGNGTGSSFSLNRGSQA
LKFFNTHQLKCQLQRHPDCANVKQWKGGPVKIDPLALVQAIERYLVVRGYGRVREDDEDS
DDDGSDEEIDESLAAQFLNSGNVRHRLQFYIGDHLLPYNMTVYQAVRQYSLQAEEEREST
DDESNPLGRAGIWTKTHTIWYKPVREDEDGSKDCVGGKRGRAQTAPTKTSPRNSKKHDEL
WHDGVCPSVLNPLEVYLISTPPENITFEDPSLDVILLLRVLHAISRYWYYLYDNAICKEI
IPTSEFINSKLTAKANRQLQDPLVIMTGNIPTWLTELGKTCPFFFPFDTRQMLFYVTAFD
RDRAMQRLLDTNPEINQSDSQDSRVAPRLDRKKRTVNRDELLKQAESVMQDLGSSRAMLE
IQYENEVGTGLGPTLEFYALVSQELQRADLGLWRGEEVTLANPKGNQEGTKYIHNLQGLF
ALPFGRTAKPAHIAKVKMKFRFLGKLMAKAIMDFRLVDLPLGLPFYKWMLRQETSLTSHD
LFSIDPVVAKSIYHLEDIVRQKKRLEQDKTQTKESLQYALEALTMNGCSVEDLGLDFTLP
GFPNIELKKGGKDTPVTIHNLEEYLRLVIFWALNEGVARQFDSFRDGFESVFPLSHLQYF
YPEELEQLLCGSKTDTWDAKTLMECCRPDHGYTHDSRAVKYLFEILSSFDSEQQRLFLQF
VTGSPRLPVGGFRSLNPPLTIVRKTFESTENPDDFLPSVMTCVNYLKLPDYSTIEIMREK
LLIAAREGQQSFHLS
NT seq
6168 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaccggcctaataacaatccaggggggtcactgcgacgttcacagaggaacact
gctggggcccagccacaagacgacgcagtaggaggaaggtcacatttagggcaggcaaaa
cataaggcacatagccctcctgagagtagaaaatctatttcaaagacacccaaagtgcag
tctaatactacttctgagcagtccaagggacacttttctaaaagaggctgtagttcatct
gctcttttaataccacaagaagatccagagagagtcaatacttcagacaagcaaaaaacg
gggcaagtgcttaagaaagacaattctcgaggagttaaacgcagcgctagtccagattac
cggaggaccaattctcctagctctgctaaaaaacccaaagcacttcaaaatactgaacct
tccttggaaagcaacaagccacatactaagtctaagagaagacacttagaccaagaacag
ccgaagtctacacaattgccatcaacaagcaaggctcacaccagaaagggtggagctgtt
ggtagctcccgaagtcagaaaaggaaaaggacagagaatctgtcttgtattggcgctgaa
gagaagtcagcaaaactctccaagctggcttcaaaatcggtgacctcagccaaagctggg
tgtagcaccatcactgattcttcttcttcagcttctacatcctcctcctcttctgctgtt
gcatctgcttcttctactgttcctcagggtgccagagtgaaacagggaaaggaccagaat
aaggctagacgttcccgttctgcatccagccccagtccgagaaggagtagcagggacaaa
gaaccaagtaaaaccagtggctcttcaaagtttgactgggctgctcgattcagcccaaaa
gtcagtctccctaaaacaaaactgtctctaccaggctcttccaagtctgagacatcaaaa
cctggaccttcaggactacaggctaagctagcaagtctaagaaaatctacaaagaagcgc
agtgaatcaccacctgctgagctccccagtttgcggcggagcacacggcaaaagaccacg
ggctcctgtgctagcaccagtcggcgaggctctggcctgggcaaaagaggagcagctgaa
gctcgccgacaggagaaaatggctgatcctgataacaaccaggatggagttaactcttca
gctgcacgtacagatgaggctcctcagggagctgcagcttctagttctgttgctggggct
gtaggtatgacaacctctggagaaagtgagtcagatgattctgagatgggaagactacaa
gctctattagaggctaggggtcttcctcctcacctgtttggccctcttggtcctcggatg
tcgcagctcttccacaggacaattggaagtggagctagttctaaagcccaacagctttta
caaggtctccaagctactgatgaaagtcagcaactacaggcagtgattgagatgtgccag
ctcttggtcatgggaaatgaagaaacattaggaggatttccagtcaagagtgttgtacca
gctttgataacactgctgcagatggagcacaactttgacattatgaaccatgcatgtcgg
gccttaacatacatgatggaagcacttcccagatcatctgctgtagtggtagatgcaatt
cctgtcttcttggaaaagctgcaagttattcagtgcattgatgtggcagagcaggcactc
acagccctggagatgttatcgcgcaggcatagtaaagccattctgcaagcaggtgggttg
gcagattgcttgctgtatctggaattcttcagtataaatgcacagaggaatgcactggct
attgctgccaactgctgccagagtataacacctgatgagtttcactttgtggcagactct
ttgccactgcttacgcaaaggttaacccatcaggacaaaaagtctgttgaaagcacttgt
ctctgttttgcacggctagtggacaacttccagcatgaggagaacttgctccagcaggtt
gcttccaaggacttgttaacaaatatccagcagctcttagtagtgacgcctcctatcctg
agctcaggaatgttcatcatggtggtgcgcatgttttccttaatgtgctcgaattgtcct
acacttgcagtccagcttatgaagcaaaatattgcagaaacgcttcactttctcctttgt
ggagcctcaaatgggagttgtcaagaacaaattgaccttgttccacgaagtcctcaagaa
ctctatgagcttacttctcttatctgtgaactgatgccttgcctgccaaaagaaggaatt
tttgctgttgatactatgctgaagaaaggaaatgcacaaaatactgatggtgcaatatgg
cagtggcgagatgacaggggcctctggcatccctacaacaggattgatagccgaataata
gaggcagctcatcaggttggcgaggatgagataagcctgtctacccttgggcgtgtctat
acgattgattttaactctatgcagcaaataaatgaggatactggaacagcacgtgccatt
cagcgaaaaccaaaccctttagccaatacgaacactagtggacattcagaattgaagaag
gatgatgctcgagcacaactcatgaaagaggacccagaactggcaaaatcctttatcaaa
acattgtttggtgttctttatgaagtgtatagttcttcagctggacctgctgttagacac
aagtgccttagagcaattcttagaataatttattttgctgatgctgaacttctgaaggat
gtgctgaaaaaccatgctgtttcaagtcatattgcctcaatgctgtcaagtcaagacctt
aagatagtagttggagccctgcagatggcagagatcttaatgcaaaagttgcctgacatt
ttcagtgtttacttcagaagagaaggtgtgatgcaccaagtgaaaaacttagcagagtct
gaggctctgctaacaagcccaccgaaagtgtgcactaatggatcaggaacgctgggtacc
acaacaataagtactggaacagccactgctgccagtaacgcagctgctgatttaggctct
cccagcttacaacacagccgggaggattctttggatctgagcccacagggacgactgagc
gatgttctaaagagaaaaagactgccgaagcgagggccaaggagaccaaaatactctcct
ccaagagatgatgacaaagtagacaatcaagctaaaagccctacaactactcaatctcct
aaatcttcctttttggcaagtttaaatcctaaaacatggggaagattaagcacacagtcc
aacagtaataatattgaaccagcacgaacagcaggagtaagtggtcttgcaagggctgct
tccaaggataccatttccaataacagagaaaaaattaagggctggattaaggagcaagcc
cataaatttgtagaacgttattttagttccgaaaacatggatggaagcaatccagcacta
aatgtattacagagactttgcactgcaactgaacaactcaacctccaggtggatggtgga
acagagtgccttgtagaaatccgtagcattgtctcggagtctgatgtctcctcatttgaa
atccagcatagtgggtttgttaaacaactgctgctttacttgacatctaaaagtgagaaa
gatgctgtaagcagggacatcagattgaaaagattccttcatgtatttttttcttctcca
cttcctggagaagagcctcttggaagactagagccattagaaaatgcacctttgttggca
ttagtccataaaatgaacaattgcctcagtcagatggaacagtttcctgtaaaagtgcat
gacttccctagtggaaatggaacagggagcagtttttctcttaacagaggatcccaagct
ttaaaattcttcaatacacatcaattaaaatgccagctgcagagacatccagattgtgct
aatgtgaaacagtggaaaggtggacctgtgaagattgatcctctggctttggtacaagcc
atcgaaagataccttgtagttagaggctatggaagagttagagaagacgatgaggatagt
gatgatgatgggtcagatgaagaaatagatgaatctttggctgctcaattcttaaattca
gggaatgtgagacacagactgcaattttacattggagatcacttgctgccatacaatatg
actgtgtatcaagcagttaggcagtacagtttgcaagctgaggaggagagggagtctaca
gatgatgaaagcaacccgttgggaagagctgggatttggacaaaaactcacaccatttgg
tacaagccagtgcgagaggatgaagatggtagtaaggactgtgttggtggtaaaagagga
agagcacaaactgctcccactaaaacctcccctagaaattctaaaaagcacgatgaattg
tggcatgatggtgtatgcccttcagtattaaatcctctagaagtttacctcatatctact
ccacctgaaaacataacatttgaagatccctcattggatgttattcttcttttgagagtt
ttacatgctatcagtcgatactggtattacttgtatgataatgcaatctgcaaggagata
attccaacctcagagtttatcaacagtaaactgacagcaaaagcaaacaggcagcttcag
gatcctttggtaattatgacaggaaacataccaacatggctgacagaacttggaaaaaca
tgcccgtttttctttccatttgatacccgccaaatgctgttttatgtaactgcttttgat
cgtgatcgagccatgcaaagactactggatactaatccagaaatcaatcaatcagattct
caggatagcagagtggcaccacgactggacaggaaaaaacgcactgtgaacagagatgag
ctgttgaaacaggcagaatctgtgatgcaggatctaggcagttcaagagccatgttggaa
atccagtatgaaaatgaagttggcacaggcctgggccccacactagagttctatgcactt
gtatctcaggaactacagagagcagacctaggcctttggaggggagaagaagtgacttta
gccaatccaaaaggaaaccaggaaggtaccaagtacatccataaccttcagggccttttt
gcacttccttttggtagaacagccaagccagctcacattgcgaaagttaaaatgaagttc
cgctttctaggaaaactaatggccaaggccattatggattttagactggtggaccttcct
cttggacttcctttttacaagtggatgttacgacaggaaacttccttgacatcacatgac
ttgttcagtattgatccagtagtagccaaatcgatatatcaccttgaagatattgtaaga
caaaagaaaagacttgaacaggacaaaacacagaccaaagaaagtctacagtatgcattg
gaggctctgacaatgaatggctgctcagtggaagatctagggctggacttcacgcttcct
gggtttcctaatatagaactgaaaaaagggggaaaagatacgccggtcaccatccacaat
ttagaggagtatctccgattggttatattttgggcactgaatgaaggtgttgccagacag
tttgactcattcagagatgggtttgaatcggtcttccccctcagtcatcttcagtacttc
tatcctgaggagttggagcagctcttgtgcggcagtaaaacggacacttgggatgcaaag
actttaatggagtgttgcaggccagaccacggttatacacatgacagtcgcgcagtgaag
tatctctttgaaattctcagtagctttgacagtgagcagcagagactgtttcttcagttt
gtgacgggtagccccagactgcctgtaggaggatttcgaagtttgaatcctccgttgaca
attgtacgcaagacatttgagtctacagagaatccagatgatttcttgccctcagtaatg
acttgcgtgaactatctcaaattgccggactattcaactattgagataatgcgtgaaaaa
ctgttgatagctgcgagagaagggcagcagtcattccatctttcctga
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integrated database retrieval system
