Columba livia (rock pigeon): 102095803
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Entry
102095803 CDS
T02912
Name
(RefSeq) LOW QUALITY PROTEIN: spectrin beta chain, non-erythrocytic 1
KO
K27409
spectrin beta, erythrocytic
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
clv04812
]
102095803
Cytoskeleton proteins [BR:
clv04812
]
Eukaryotic cytoskeleton proteins
Actin filaments / Microfilaments
Actin-binding proteins
Cross-linking proteins
102095803
Intermediate filaments
Intermediate filament-binding proteins
102095803
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Spectrin
CH
PH_9
PH
CAMSAP_CH
PH_11
DUF4851
Talin_IBS2B
Motif
Other DBs
NCBI-GeneID:
102095803
NCBI-ProteinID:
XP_021138163
LinkDB
All DBs
Position
Unknown
AA seq
2054 aa
AA seq
DB search
MTSANDYEQLELQQQYSRINVRWDASDDELDNDNSSARLFERSRIKALADEREAVQKKTF
TKWVNSHLARVTCRISDLYMDLRDGRVLIKLLEVLSGELLPKPTKGRMRIHCLENVDKAL
QFLKEQRVHLENMGSHDIVDGNHRLVLGLIWTIILRFQIQDIIVETQEGRETRSARDALL
LWCQMKTAGYPHVNVTNFTSSWKDGLAFNALIHRHRPELVDFQNLTKSNARHNLEHAFSV
AERHLGITPLLDPEDVFTENPDEKSIITYVVAFYHYFSKMKVLEVEGRRLGKVIEHAKET
ERMIEGYGGLASDLLTWIEQTIASLNSRSFANSLAGVQHQLQAFSTYRTVEKPPKFQEKG
NLEVLLFTIQSRMRANNQRVYTPHEGRLVSDINRAWEQLEKAEHERELALRNELIRQEKL
EQLARRFDRKAAMREAWLSENQRLVAQDNFGQDMPAVEAAKKKHEAIETDTAAYKERVQA
IEAVARELEVEGYHDIQRITRRKENILRLWEQLLELLAARRQRLEMNLVLQHLFQEMLHC
IDWMDEVKVQLESPESGKHLLEAEELLQTHRLLERDMALQAEKTRAISAAALRFADAEGY
RPCDPKIIRDRVSHLELCRRELQALAARRRALLEQYRSLWTCLWELDEAEAWIKEQEQLY
SALDFGLQDALDLYTVFGESDACHLWMGAKETWLGQREVPQALEDLDVAQHRLDGLEQEM
ATVATXXXXAAEGLLASGHPRSPQVRQCQEQLNQRWDRFRELAAERRRAVGSALRLLNYR
LESEETRQWLQSKTRAVEATAELGRDLAGVLATQRKLYGIERELAXDRLATMRSQAELLA
QERPEVAGEVTERLVAAATAWEELQGALGERAASLGEAGQLRRFLQDLDDFQAWLFGAQK
AVALTDEVPASLAEAEEMLRRHEAAQRDAEEHTAAFTALVETGERVLGEQQDPEYEGLRQ
RLRGVEAGWAVLARMADARHGFLVQCRGFQEFLRDAKQVEILLANQEYTLAHLELPASLE
GSAAALRRFQDFRTSLESSAEKVPEVVASGTKLVAEGNIFSEKITEKCQALQERHRDVTA
KAEEAAGLLQDNHELQTFLQSCRELDAWVEEKMLTAQDTSYGEGRGLHGKWQKHQAFMAE
LEPNQGWLEKIEMEGKELAGRKPQYSEVVVRRLMELRGRWDGLRGAAEEKGRRLLEAHRS
ALYAQSSAELESWLGRAEEELRATELAKDLTATNLLLKRLTRLEEQVRARLKELEELGWP
GPPPTGDVPDTAGQEQRMWVQERLPLARSTEHGTDLPSVQRLAKRNETLQKELGGHAPRL
AEVLSRGEAAASGAEPRPELEARVRELRGLWETLQEEAAARHRRLQDAREAQQYYQDAGE
AEAWVSEQELFMGAEEKPKDEESGLMMLKRHVRQQRAIEDYGQTIKELAGRAQQMLSAGH
PEGEQIIRLQGQVDKHYAGLKEAAEERRRRLENMSHLFQLKREVEDLEQWIAERDVVASS
QEMGQDLDHVTLLREKFREFARETGSVGQERVDRVNLAIEDLIDAGHTEAATMAEWKDGL
NESWADLLELIDTRMQLLAASYDLHKYFYDGAELLRQELPQDLGEDAGTVEAFHRMHSAF
ERDLQLLETQVQQFRETAARLQTAYAGEKAAGIQEQEQEVARALRELLEACSGRRARLVD
TADKHRFFGMARDLLSWMESTVRQIETQEKPRDVSSVELLMKYHQGIRAEVDARSKNFST
CIELGKKLLQRKHQDSPEIKAKLVELMEKRKAMMETWEQRWDQLRLLLEVCQFSRDASVA
ESWLMAQEPYLASTDYGQTVDAVEKLLKRHEAFEKSSATWEERIAALRKLTTLELLGGRS
LRDGLTGDRVTHTEGPDYRLDLDGELEAGSEEEEEEKKDTSTQDTSLLTTDGPEPTLGDE
ELVSPRLPREEPEEPATLPARSCGVQLEGYLGRKHDLEAATKRASNRSWSTRYCVLRGGQ
LAFFKDAKSRALGLPCHGEEPLGLRDALCEVALGYKKKKHVFKLRLSNGSEWLFHGKDEE
ELQAWLQGLTCPPV
NT seq
6165 nt
NT seq
+upstream
nt +downstream
nt
atgacctcggccaacgactacgagcagctggagctgcagcagcagtacagccgcatcaac
gtgcgctgggacgcctccgacgatgagctggacaacgacaacagctcagcgcggctcttc
gagcgctcccgcatcaaagctctggcagatgagcgagaggccgtgcagaagaaaaccttc
accaagtgggtgaactcgcacttggctcgtgtcacctgccgcatctcggacctctacatg
gaccttcgggatggccgggtgctcatcaagctgctggaggtgctgtcaggagagcttctg
cccaagcccaccaagggccggatgcggatccactgcctggagaacgtggacaaggcgctg
cagttcctgaaggagcagcgggtgcacctggagaacatggggtcccacgacatcgtggac
ggcaaccaccgcctcgtccttggcctcatctggaccatcatcctccgcttccagatccag
gacatcatcgtggagacgcaggagggccgggagacgcgctccgccagagatgcgctgctg
ctctggtgccagatgaagacggcggggtacccccacgtgaacgtcaccaacttcacctcg
agctggaaggacgggctggctttcaacgccctcatccacaggcacaggcccgagctggtt
gacttccaaaacctgaccaaatccaacgcccgccacaacctggagcacgcgttcagcgtg
gccgagcggcacctgggcatcaccccactcctcgaccctgaagatgtgttcacggagaac
cccgatgaaaagtccatcatcacctacgtggtggctttctaccactacttctccaagatg
aaggtgctggaggtggagggcaggcgcctgggcaaggtcatcgaacacgccaaggagacg
gagaggatgattgagggctatgggggtttggcgtccgacctgctcacctggatcgagcag
accatcgcctccctcaacagccgcagcttcgccaactcgctggccggtgtccagcaccag
ctccaggccttcagcacctaccgcactgtggagaagccacccaagtttcaggagaagggt
aacctggaggtgctgctcttcaccatccagtcgcggatgcgagccaacaaccagcgtgtc
tacaccccgcatgagggacgtctggtctccgacatcaatcgggcctgggagcagctggag
aaagcggagcacgagcgggagctggcgctgcgcaacgagctgatccggcaggagaagctg
gagcagctggcacggcgcttcgaccgcaaggccgccatgcgggaggcctggctgagcgag
aaccagcgcttggtggcccaggacaactttggccaggacatgccggcagtggaggcggcc
aagaagaagcacgaggccatcgagacggacacggccgcctacaaggagcgggtgcaagcc
atcgaggcggtggccagggagctggaggtggagggttaccacgacatccaacgcatcacc
aggcgcaaggagaacatcctgcggctctgggagcagctcctggagcttctggccgcccgg
cgccagcgcctggagatgaacctcgtcctgcagcacctctttcaggagatgctccactgc
atcgactggatggatgaggtcaaggtgcagctggagtcacccgaatccgggaagcacctt
ctggaggcagaggagctgctgcagacccaccggctgctggaacgcgacatggccttgcag
gcagagaagacacgagccatcagcgctgccgccctccgcttcgccgatgccgagggctac
cgtccctgcgaccccaaaatcatccgtgaccgcgtgagccacctggagctgtgccggcgg
gagctgcaggcgctggcagcccggagaagagccctgctggagcagtaccgctccctctgg
acctgcctgtgggagctggacgaggcggaggcttggatcaaggagcaggagcagctttac
tctgccttggatttcgggctgcaggatgcccttgacctctacactgtctttggggagagc
gatgcttgtcacctctggatgggggccaaggagacatggctggggcagcgggaggtcccg
caggcgctggaggacctggacgtggcgcagcacaggttggatgggctggagcaggagatg
gccactgtggctaccnnnnnnnnnnnngcagccgagggcctgctggccagtgggcacccc
cgcagcccccaggtccggcagtgccaggagcagctgaaccagaggtgggaccggttcagg
gagctggcagccgagcgtcgccgggcggtgggctctgctctgcgtctgctcaactaccgc
ctggagagcgaggagacccggcaatggctgcagagcaaaacccgggcggtcgaggccacc
gccgaactaggtcgggacctggccggtgtcctggccacccaacgcaagctctatggaatc
gagcgggagctggcgngggaccgcctggccaccatgcgctcccaggctgagctcctggcg
caggaacgacctgaggtggccggggaggtgactgagcggctggtggcggcagcgaccgcc
tgggaagagctgcaaggagccctgggtgagcgggcggcctcgctgggggaagccgggcag
ctccggcgcttcctccaggacctggatgacttccaagcatggctcttcggtgctcagaaa
gccgtggcgctcaccgatgaggtgccggcctccttggctgaggcggaggagatgctgcgg
cggcacgaggctgcccagcgggacgcggaggagcacacggccgccttcaccgccttggtg
gagacgggggagcgggtgttgggggagcagcaggacccggagtatgaggggctgcggcag
cggctgcgcggcgtggaggccggctgggctgtgctggccaggatggcggacgcccggcac
ggcttccttgtccagtgccgcggcttccaggagttcctccgtgacgccaagcaggtggag
atcctcctcgccaaccaggagtacacgctggcacacttggagctgccggcatcgctggag
ggctcggcggctgccctgcgccgcttccaggacttccgcaccagcctggagagcagcgct
gagaaggtccctgaggtggtggccagcggcaccaagctggtggccgaggggaacatcttc
tctgagaagatcactgagaagtgccaggctctccaggagcggcacagggatgtcacagcc
aaggcggaggaggcagcaggcttgctgcaggacaaccatgagctgcagaccttcctgcag
agctgccgggagctcgacgcctgggtggaggagaagatgctgacagcacaggacacctcc
tatggtgaaggtcgtggcctccatggcaagtggcagaagcaccaggcgttcatggctgaa
ctggaacccaaccagggctggctggagaagatcgagatggaggggaaggagttggcgggc
cgcaagccgcagtacagcgaggtggtggtgcggcggctgatggagctgcggggccggtgg
gacgggctgcgcggcgccgccgaggagaagggccggcggctcctcgaggctcatcgctcg
gcgctgtacgcccagagctccgcggagctggagagctggctggggcgcgccgaggaggag
ctgcgtgccaccgagctggccaaggacctcacagccaccaacctgctgctgaagaggcta
acgagactggaagagcaagtgcgagcacggctgaaggagctggaggagctggggtggccg
ggacctcccccgacgggggacgtgccggacacggctgggcaggagcagaggatgtgggtg
caggagcggctgcccctggcgcggtccacggagcacggtaccgacctcccgagtgtgcag
cgcctggccaagaggaacgagacgctgcagaaggagctggggggccatgccccccgcctg
gcagaggtgctgagccgtggtgaggcagcggcgagcggggccgagccgaggccagagctg
gaggcacgagtgcgggagctgcgggggctgtgggagacgctgcaggaggaggcggccgcc
cggcaccggcgcctgcaggatgccagagaggcccagcagtattaccaggatgccggcgag
gccgaggcgtgggtcagcgagcaggagctgttcatgggagccgaggagaagccgaaggac
gaggagagcggtttgatgatgctgaagagacacgtgcggcagcagcgggctattgaggac
tacggccaaaccatcaaggagctggcggggagggctcagcaaatgctctccgcaggtcac
cctgagggggagcagatcatccggctgcagggccaggtggacaagcactacgcggggctg
aaggaggcggccgaggagcggcgccggcgcctggagaacatgtcccacctcttccagctg
aagcgggaggtggaagacctggagcaatggatcgccgagcgcgacgtggtcgcctcctcc
caggagatggggcaggacctggaccatgtcacgctcctgcgggagaaattccgtgagttt
gcgcgggagacgggcagcgtggggcaggagcgcgtggaccgggtgaatttggccatcgag
gacctcattgacgcggggcacaccgaggcggccaccatggccgagtggaaggatgggctg
aacgagagctgggccgacctgctggagctcatcgacacccgcatgcagctcctcgctgcc
tcctacgacctccacaagtatttctacgacggtgctgagctcctccgccaggagctgccc
caggacctgggtgaagatgccggcacggtggaggcttttcaccgcatgcacagcgccttc
gagcgggacctacagctgctggagacacaggtgcagcagtttcgggagacggcagcgcgg
ctgcaaaccgcctatgctggggagaaggcggccgggatccaggagcaggagcaggaggtg
gcgcgagccctgcgggagctgctggaggcgtgcagcgggcgccgcgcccggctggtggac
acggctgacaaacatcgcttcttcggcatggcgcgggacctgctctcctggatggagagc
accgtccggcagatcgagacgcaggagaaacccagggatgtctcctcggtggagctgctc
atgaagtaccatcagggcatccgagccgaggtggacgctcgcagcaagaacttcagcacc
tgcatcgaactgggcaagaagctgctgcagcgcaagcaccaggactcgcccgagatcaag
gcaaagctggtggagctgatggagaagaggaaagccatgatggagacgtgggagcagcgc
tgggaccagctgcggctgctgctggaggtgtgccagttctcccgggacgcctcggtggcc
gagtcatggctgatggcgcaggagccctacctggccagcaccgactacgggcagacggtg
gatgcggtggagaagctgctcaagcggcacgaggctttcgagaagtcctcggccacctgg
gaggagcgcatcgccgccctgaggaagctgacaacgctggagctcctgggtgggcggtcg
ctgcgtgacgggctgacaggggacagggtgacacacaccgagggtcccgactaccgcctg
gacctagacggggagctggaggcagggtctgaggaggaggaggaagaaaagaaggacaca
agcacacaggacacctctctgctcaccaccgatggaccagagccgacgttgggcgatgag
gaactggtgtcaccacggctgccgcgggaggagccggaggagccggccacgctgccggcc
cgttcctgcggcgtccagctcgagggctacctgggccgcaagcacgacctggaggcggcc
accaaacgggcgtccaaccggtcctggagcacacggtactgcgtcctgcgcggcggccag
ctcgccttcttcaaggacgccaagagccgggcgctggggctgccatgccacggcgaggag
cccctggggctgcgggacgcgctgtgcgaggtggccctgggctacaagaagaagaagcac
gtcttcaagctcaggctcagcaatggcagcgagtggctcttccatggcaaggatgaggag
gagcttcaggcctggctgcaggggctgacttgccctcctgtgtag
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integrated database retrieval system
