Columba livia (rock pigeon): 102095847
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Entry
102095847 CDS
T02912
Symbol
PATL1
Name
(RefSeq) LOW QUALITY PROTEIN: protein PAT1 homolog 1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
102095847 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clv03019
]
102095847 (PATL1)
Messenger RNA biogenesis [BR:
clv03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
102095847 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
102095847 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
102095847
NCBI-ProteinID:
XP_021154846
LinkDB
All DBs
Position
Unknown
AA seq
823 aa
AA seq
DB search
MGGVALGPPYIQARWRVALSLVPVPEPGAVPALIPRDGHKEGAEGRDELEPPFTWDTWGH
RQRLCNARSDPRRHSCLSLSPQSLEDCPLDEDEDAFQALGEEDEDIDQFNDDTFGAGAVD
DDWQEAHERLAELEEKPAVTREQDGAGNEEADLLGDPEDVLAERLTRLVIDSELEDPAIM
QAVQTRVPAQQPGGLNSSIWDSSAVLRRIRGPLLTQEMPSVSVLDYALPQRPPQPREEER
DPSERALPRRSSSPVIGSPPVRAVPIGTPPKQAAAPNFNQQILCPKPVHIRAAVQQRYPP
PYGDRMSPNQLCNVPNSSILGHPFPHSVSPVLTHLQRAQLLGGAQAGRMSPSQFARVSGL
VGNPLPSVNPKLLQGRVGQMMSPASGFRAFFGAPPAPPPSQPPPGPGSHLQSLRPQPQMF
RPDTTHLHPQHRRLLHQRQQQNRNQHRGLNGSVGDRGGHRSGHQEQARKDPYANLMLQRE
KDWVAKIQMMQLQSTDPYLDDYYYQNYFQKLEKLAAAEEVQGDGPKKERTKLITPQVAKL
EHTYKPVQFEGSLGKLTVSSVNNPRKMIDAVVTSRGEDDETKEKQVRDKRRQTLVTIEKT
YSLLLDVEDYERRYLLSLEGDRPALMGERKQKICDMYDNLRGKAPGQERPSDDHFMQIMC
IRKGKRLVARIVPFLSPEQAADVLMATARNLPFLIKKDAQDEVLPCLLRPFSHVLYHLPL
GTVTSLVQQLEGREKSSLSPWGDSCDLXQSRGDILTPPMCVPPQFGLSLLYLTLSRGEEL
QSSDTNAELLRDNQWTELMLMATRELLRIPAGALAKPVAPPSN
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atggggggtgtcgccctcggtcctccctacatccaggcgaggtggcgggtggccctgtcc
cttgtccctgttcccgagcccggggctgtccctgcgctaatcccccgtgacgggcacaag
gaaggcgccgaggggagggacgagctggagccacccttcacctgggacacttggggacac
cggcaacggctctgtaatgcccgatctgacccccgccgccattcctgtctctccctttcc
ccccagtccctggaggactgtccgctggacgaggacgaagacgctttccaggccctgggg
gaggaagatgaagatattgatcagtttaacgatgacacgtttggagccggggctgttgat
gacgactggcaggaggcacacgagcggctggcggagctggaggagaaaccagcggtgacc
agggagcaggatggagctggtaatgaggaggcggatctgctgggggatcccgaggatgtg
ctggcggagcggctgaccaggctggtcatcgacagcgagctggaggaccctgctatcatg
caggccgtgcagaccagggtccctgcacagcagcctggagggctgaactccagcatctgg
gacagctcagccgtcctgcggcggatccgggggccgctcctcactcaggagatgccatcg
gtgtccgtgctggactatgctctgcctcagagacccccccagcctcgagaagaggagcgg
gacccctcggagcgagcgttaccccgccggtcctcgtcccctgtcatcgggagcccccct
gtccgggctgtccccatcggcaccccacccaaacaagctgctgcccccaacttcaaccag
cagatcctgtgcccaaagcccgtccacatccgagcggccgtgcagcagcgttatccccct
ccctacggcgacaggatgtccccaaaccagctctgcaacgtaccgaattcctccatcctg
ggccacccattcccccacagcgtctctcctgtcctcacccacctgcagcgagcacagctg
cttggaggagcccaggccggccgaatgtcccccagccagtttgcccgggtctccggtctg
gttgggaaccccctcccctccgtcaaccccaagttactccagggcagagtcgggcagatg
atgtctccggccagcggctttcgtgccttttttggggctccccctgctccgccaccctcg
cagcccccgccgggccccggatcccacctgcagagcctgaggccacagccccaaatgttt
cggccggacacaacccacctgcacccccagcaccgccggctcctgcaccagcggcagcag
cagaaccgaaaccaacaccgcggcctcaacggctcggtgggggaccgagggggtcaccgg
agcggtcaccaggagcaggcgcggaaagacccctacgccaacctcatgctgcagcgggag
aaggactgggtggccaaaatccagatgatgcagctgcagagcactgatccctacctggat
gattattattaccagaattatttccagaagctggagaagttggctgcggccgaggaagtt
cagggcgatggccccaaaaaggaacggacgaaactcatcaccccccaggtggccaagctg
gagcacacctacaagccagtgcagttcgagggttcgctcgggaaactcacggtctccagc
gtcaacaaccctcggaagatgatcgatgcggtggtgacgtcccgtggggaggatgatgag
acgaaggagaagcaggttcgggataagagacggcaaaccctcgtcaccatcgagaagacg
tacagtctcctcctggacgtggaggactacgagcgccgctacctcctgagcctggaaggc
gaccggccggcgctgatgggcgagaggaagcagaaaatctgcgacatgtacgataacctg
agggggaaagcgcccgggcaggagaggcccagcgacgatcacttcatgcagatcatgtgc
atccgcaaaggcaaacgcctcgtcgcccgcatcgtccccttcttgtcacccgaacaagcg
gccgacgtcctcatggccaccgcccgaaacctgcccttcctcatcaaaaaagacgctcag
gacgaggtgctgccctgcctgctgagacccttctcacatgttctgtatcacctgcccttg
gggacggtcaccagcctggtgcagcagttggaggggcgggagaaaagctcgctgtcacct
tggggtgacagttgtgacttgtgacagtcccgtggggacattttaaccccccctatgtgt
gtccccccccagtttggtctgtccctcctgtacttgaccttgagccggggggaggaactg
cagagctcggacaccaacgcggagctgctgcgggacaaccagtggacggagctgatgctc
atggccactcgggagctgctgcggatcccggcgggggctctggccaaacccgtggccccc
ccctccaat
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