Columba livia (rock pigeon): 102095980
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Entry
102095980 CDS
T02912
Symbol
ATG16L1
Name
(RefSeq) autophagy-related protein 16-1 isoform X1
KO
K17890
autophagy-related protein 16-1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04136
Autophagy - other
clv04140
Autophagy - animal
clv04621
NOD-like receptor signaling pathway
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
102095980 (ATG16L1)
04136 Autophagy - other
102095980 (ATG16L1)
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
102095980 (ATG16L1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102095980 (ATG16L1)
03029 Mitochondrial biogenesis [BR:
clv03029
]
102095980 (ATG16L1)
Membrane trafficking [BR:
clv04131
]
Autophagy
Autophagosome formation proteins
Atg12 conjugation proteins
102095980 (ATG16L1)
Others
Specific organelles associated proteins
Auto phagosome
102095980 (ATG16L1)
Mitochondrial biogenesis [BR:
clv03029
]
Mitochondrial quality control factors
Mitophagy factors
Autophagy-related proteins
102095980 (ATG16L1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40
WD40_WDHD1_1st
WD40_Prp19
ATG16
WD40_CDC20-Fz
Beta-prop_EML_2
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
Beta-prop_EML
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_DCAF4
WDR90_beta-prop_4th
Beta-prop_RIG_2nd
ANAPC4_WD40
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WD40_RFWD3
NBCH_WD40
Beta-prop_IFT140_1st
eIF2A
Beta-prop_HPS5
Beta-prop_NWD2_C
Beta-prop_DCAF12
Beta-prop_WDR19_1st
Ge1_WD40
CCDC93_CC
Beta-prop_Vps41
INO80F
Fez1
WD40_like
Lipoprotein_6
HTH_6
AP5B1_middle
HEF_HK
PUMA_CC
V_ATPase_I
WH_CYT4
FUSC
Motif
Other DBs
NCBI-GeneID:
102095980
NCBI-ProteinID:
XP_005512768
UniProt:
A0A2I0LTR3
LinkDB
All DBs
Position
Unknown
AA seq
546 aa
AA seq
DB search
MQSRHEISPGHDGTWNDAQLQELAQLKIKHQEELTELHKKRGELAQSVIDLNNQMQQKDK
EMQMNEAKIAEYLQKISELETECQELRSKLQDLERANQTLKDEYDALQITFNALEEKLRK
TTEDNQELVSRWMAEKAQEANRLNAENEKDSRRRQARLQKELAEAAKEPLPVEPRDDDIE
VLADETSDTAEETSPVRTVSRTSSKRLSQPAGGLLDSITNIFGRRSLSSLPAPQDNVEPH
PGASKEVRVPTTAICVFDAHDGEVNAVQFSPGSRLLATGGMDRRVKLWEVLGDRCEPKGS
LSGSNAGITSIEFDSAGSYLLAASNDFASRIWTVDDNRLRHTLTGHSGKVLSAKFLLDNA
RIVSGSHDRTLKLWDLRSKVCIKTVFAGSSCNDIVCTEQCVMSGHFDKKIRFWDIRTESI
VKELELLGRITALDLNSERTELLTCSRDDLLKIIDLRVSAVKQTFSAQGFKCGSDWTRVV
FSPDGNYVAAGSADGALYIWNVLTGKLERMLAKHHSSPINAVAWSPAGAHVVSVDKGNKA
VLWSEF
NT seq
1641 nt
NT seq
+upstream
nt +downstream
nt
atgcagagcagacatgagatcagtccaggacatgatggcacatggaatgacgctcagctg
caggaactggcacagctgaagataaagcatcaagaagagctgacagagctgcacaagaaa
cgtggcgagctggcgcagtccgtaattgatctgaataaccaaatgcagcagaaggacaaa
gagatgcagatgaatgaagcaaagattgcagagtatttgcaaaagatctctgaactggaa
acagagtgccaggaattgcgtagcaaactgcaagatctggaacgagctaatcagacgctg
aaagatgagtatgacgctctccagatcaccttcaacgccttggaggagaaactgaggaaa
actactgaagacaaccaggagctggtctcgcgttggatggcagagaaagcacaagaagcc
aatcgtttgaatgcagaaaatgaaaaggattcaaggagacgacaagccaggctgcagaag
gagctggcagaagctgccaaagaacccctgcctgttgaacccagggatgatgatatcgaa
gtgctggcagatgaaacctctgacacagctgaggagacttctccagtgagaaccgtcagc
cgaacatccagtaagcgactctcccagccagctggaggccttctggactctatcactaat
atctttgggaggcgttctttgtcttcgctccctgctccccaggataacgtggagccacat
ccaggtgccagcaaagaagtgcgagtgcccactactgccatatgtgtcttcgacgcacac
gatggggaggtgaacgcagtgcagttcagccccggctcccggttactagcaacaggaggc
atggaccggagggttaagctttgggaagtcttgggagataggtgtgaacctaaaggttcc
ctctcgggtagtaatgctgggattacaagcatagaatttgatagtgcgggttcgtacctc
ttagcagcttcaaatgactttgccagcagaatctggacggttgatgacaatcgattgcgg
cacaccctgacaggtcacagcggcaaagttctgtcggccaagttcttgctggacaatgca
cgcattgtttcgggaagtcacgaccggactctcaagctctgggacctccgcagcaaagtt
tgtataaaaacagtgtttgcaggatctagctgcaatgacatcgtatgtactgagcaatgt
gtaatgagtggacattttgataagaaaattcgtttctgggacatcaggactgaaagcatc
gtaaaagaactggagctgcttgggagaatcacagctctggacctgaactcagagcgaaca
gagcttttgacctgttcccgtgatgatctgctaaagatcattgatctgcgggttagtgct
gtcaagcagacattcagtgcccagggattcaaatgcggctctgactggacaagagttgtg
ttcagccctgacggtaactatgttgctgctggttcagctgatggggccctatacatttgg
aatgtgctcactggcaagttggagaggatgctggcaaagcatcacagttctcctatcaat
gcggtcgcgtggtcaccagcgggtgcccacgtggtcagtgtggacaaaggaaacaaggct
gtcctgtggtctgaattttaa
DBGET
integrated database retrieval system
