Columba livia (rock pigeon): 102096659
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Entry
102096659 CDS
T02912
Symbol
TLR4
Name
(RefSeq) LOW QUALITY PROTEIN: toll-like receptor 4
KO
K10160
toll-like receptor 4
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04145
Phagosome
clv04217
Necroptosis
clv04620
Toll-like receptor signaling pathway
clv04621
NOD-like receptor signaling pathway
clv05132
Salmonella infection
clv05164
Influenza A
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
102096659 (TLR4)
09143 Cell growth and death
04217 Necroptosis
102096659 (TLR4)
09150 Organismal Systems
09151 Immune system
04620 Toll-like receptor signaling pathway
102096659 (TLR4)
04621 NOD-like receptor signaling pathway
102096659 (TLR4)
09160 Human Diseases
09172 Infectious disease: viral
05164 Influenza A
102096659 (TLR4)
09171 Infectious disease: bacterial
05132 Salmonella infection
102096659 (TLR4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102096659 (TLR4)
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
clv04054
]
102096659 (TLR4)
04090 CD molecules [BR:
clv04090
]
102096659 (TLR4)
00536 Glycosaminoglycan binding proteins [BR:
clv00536
]
102096659 (TLR4)
Membrane trafficking [BR:
clv04131
]
Endocytosis
Phagocytosis
Toll-like receptors
102096659 (TLR4)
Pattern recognition receptors [BR:
clv04054
]
Membrane-bound pattern recognition receptors
Toll-like receptors
102096659 (TLR4)
CD molecules [BR:
clv04090
]
Proteins
102096659 (TLR4)
Glycosaminoglycan binding proteins [BR:
clv00536
]
Hyaluronan
Cell surface receptors
102096659 (TLR4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LRR_8
LRR_4
TIR
LRR_1
LRR_5
TIR_2
LRR_9
LRR_EndoS
LRR_R13L1-DRL21
LRR_Zer-1
LRR_6
LRR_NXF1-5
Motif
Other DBs
NCBI-GeneID:
102096659
NCBI-ProteinID:
XP_005498441
LinkDB
All DBs
Position
Unknown
AA seq
825 aa
AA seq
DB search
MPRRGAFPPWTLVVLLVLVPPQLANCLPNPCLEVVPDRAFTCMGLNVXTQNLDLSFSNLK
SLGSNYFSSVPELHHLDLTRCQLHTIEDNSFKDLHKLSTLILTANSLQYLGTAAFDGLTL
LKKLVLVETNITSLADLPIGHLHTLQELNLGHNNIASLKLPEYFTNLTSLRYLSFFSNKI
THISKGDLDVLREGNRLNLTLVLSLNDIKYIEPGSFAKIYLGELVLRSSFENFSVMHSSL
QGLTGLQVNRLIVGEFNNNQRLVDFQRGLLSGLCQVRMQEFVLICFRDFEDDTDTLFNCI
GNVSSIRLVDLQLEEVSEVPMFSQVKQLECKKCKFKEVPAVKLSLFKELRVLRITKSKYL
NSFREKFHTLSNLEVVDLSENRLSFTGCCSRQFPKCPNLKHLNLSFNSDISVTGDFATVK
NLLYLDFQHTKLFGPGSYPVFLSLQKLIYLDISYTRTHVKAQCTFCGLNSLQVLKMAGNS
FETNKLVDSFKNLSHLHTLDISNCKLVQVDQSTFGALTELKELNISNNKLLIFDPGVYKP
LRALTALDFSNNQLSVLLDSALEILPDSLVLLDISQNLFDCSCIHVNFLKWVKEQQQLLQ
HEELMICHMPTYVXXXSSCQLNTSMVASSVIMLLAAVVFLFLIYKYYFQLYYSLVLLSGC
KHSAERGDTYDAFVIHSSKDQEWVMKELVEPLEGGTPPFHLCLYYRDFIPGVPIVTNIIQ
EGFLSSRNVIAVISTDFLESKWCSFEFDIAQSWQLVEGKAGIIMIVLEEVNKALLRQRLG
LSRYLRRNTYLEWKNKEISRHIFWRQLTGVLLEGKRWNHEEVKLM
NT seq
2478 nt
NT seq
+upstream
nt +downstream
nt
atgcccaggagaggagcttttcctccgtggacactcgtggtgctgctggtgcttgtccca
ccacagctggcaaactgcctccccaacccctgcttggaggtcgttccggacagagctttc
acgtgcatgggactgaatgtcnntacccagaacttggatcttagtttcagcaatctgaaa
tcactgggatcaaattatttttcatcagttcctgaactgcatcatctggatcttacaagg
tgccagctccatacaatagaagataactcttttaaggatcttcataagctttccacctta
attttaactgccaattccctccagtacctggggactgcagcttttgatggcttaacattg
ctgaaaaaactagtattggtggaaaccaacataacatctctagctgacctacccattgga
cacttgcataccctgcaggaactgaatttgggccacaacaacattgcctcattgaagctt
cccgagtatttcaccaatctgacctctctcaggtacctgagctttttctccaataagatc
acacatatctccaaaggagaccttgatgtcctgagggaagggaacaggctcaacctcacg
ctggtgctttccttgaatgatataaagtacatagagccagggtcctttgcaaagatttac
cttggtgagctggttctaaggtcctcttttgagaacttcagtgtgatgcacagttctctt
caaggtctgactggtttacaggtcaatagactaatagttggagaattcaacaacaaccag
agactggtagactttcagagaggactcttgagtggactgtgtcaggtacgaatgcaagag
tttgtcttaatctgtttcagggattttgaggatgacacagatactctttttaactgcata
ggcaacgtctccagtattcggttggtggacctccaacttgaagaggtgtcagaggttcca
atgttctctcaagtgaaacagctggaatgcaagaaatgcaagtttaaggaagtgcctgct
gtgaaactgtctcttttcaaggagctgagagttcttcgtattaccaagagcaaatacctc
aatagcttccgggagaaatttcacactctaagtaacctggaggttgtagatctgagtgag
aatcgcctctccttcactggttgctgttcccggcagtttcctaagtgtccaaatttgaaa
cacttgaacctcagcttcaattctgacatcagtgtgactggtgattttgctactgtgaag
aatttgctatatttggactttcagcacacaaagttatttggtcctggttcctaccctgtc
tttctgtcccttcagaaactcatttatcttgatatttcctataccagaactcatgtcaaa
gcccagtgtacgttttgtggcttgaactctttgcaagtgctcaagatggctggcaactcc
tttgagactaataaactggtggatagcttcaaaaacctcagtcacctgcacaccttggat
atttcaaattgcaaattagtacaggtggatcaaagtacatttggtgccctcactgaacta
aaggagctaaacatcagcaacaataagctactgatctttgatcctggagtctacaagccg
ctccgagccctcacagccctggatttcagcaacaaccagctgagcgtcctgttggactcg
gccctggaaatcctgcctgatagtctggtcctgttagacatctctcaaaacctgtttgat
tgctcttgtatacacgtgaactttctgaaatgggtcaaggaacagcagcagctactgcag
catgaggagttgatgatatgccatatgcccacgtacgtnnnnnnnnnntcctcctgccaa
ctcaatacaagcatggtggcatcctcggtgatcatgttgctcgctgcagtggtgttcctc
ttcctgatttacaagtactacttccagctatactactcactggtgctgctcagtgggtgt
aaacattctgcagaaaggggtgacacctatgatgcatttgtcatccactccagcaaagac
caagaatgggtgatgaaggagctggtggaacctttagaaggaggaacacctcccttccat
ctctgtctttactacagggatttcatacctggggtacccattgtcaccaatataatccaa
gaaggttttctgagtagcagaaatgtcattgcagtcatctctacagactttctggagagc
aagtggtgtagctttgagtttgacattgcccagtcctggcagcttgtcgaaggaaaggct
ggaatcatcatgattgtactggaagaagtgaacaaagccttgctaaggcagaggctgggg
ctgtcccggtacctaaggaggaacacctatctggagtggaaaaacaaggagatcagcagg
cacatcttctggaggcagctgacaggagtcctgctagaagggaaaaggtggaatcacgag
gaggtaaagctcatgtga
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