Columba livia (rock pigeon): 102096660
Help
Entry
102096660 CDS
T02912
Symbol
SH3TC1
Name
(RefSeq) LOW QUALITY PROTEIN: SH3 domain and tetratricopeptide repeat-containing protein 1
KO
K24313
SH3 domain and tetratricopeptide repeat-containing protein
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102096660 (SH3TC1)
Membrane trafficking [BR:
clv04131
]
Protein recycling
Rab GTPases and associated proteins
Rab11 associated proteins
102096660 (SH3TC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_12
ARM_TT21_4th
TPR_2
TPR_8
TPR_1
SH3_1
Csd3_N
SH3_2
ARM_TT21_C
ARM_TT21
TPR_10
Motif
Other DBs
NCBI-GeneID:
102096660
NCBI-ProteinID:
XP_021143894
LinkDB
All DBs
Position
Unknown
AA seq
1338 aa
AA seq
DB search
MESLVVGGSTSVLGADTIVPCPEGKQDGNLERKGMEQGRCGSGWNCVETSVATSTNSDGV
RMDMLQEQMEYSQSEKCMDVCSRTLPSQAENFPTVSFSRYLPEVXXXXRLQRQLRGQLRL
LESDSMEVTAVFSELSARLLSIHSDQDLIVVTFKTFEEIWKFLTYYSLGFINHCMENLFL
DQSFWLYSQEEEETGIKVCINEKSLNLMYRSLLVQEESFFVLCHDNLIRKIIATDNEINT
YLETGAFTEDVTVESVEGDTTVLSNASLEPLIPFHQWFLKGYSNSIDLPYKTESKPIRKV
DEKIHSNISMAMGSCLAVMNYESIALEEISFQEGDKIEILGYFIECMEWFLGRHVFTGQI
GFVKTSHVKLDLSKNKPQDLDFLDAEELSFFSKEKNLEEVIHMLKQTAITDICSVYRIDQ
LEEPELQKAHECEIPCSHSGTGSTNKNGKIEEFLKNFKNLEATQTEEPATEGKDSASAAN
MEVFPPPEGPCFHICQNDIQASDISESLLFFLDRREYDRNFRNLYEFSYPFINSMFYGFS
EEDDLVSFFRLAREAAKKAGMSWALARLCFLLGRLSIKKLKLSQARVYFEEALGAVAGGF
SDLYFVIALYTNLTVIYLTQKNKEKCAHVFDKAASLLMGIPNYICSADLESDILKYALQR
AILSQNKQAEARACFLLAKHYSAHKQHEEALPFLERFQLLLDDLGLQNNLLNESYFKLAE
SYNEKCLPHIVLSCIKVASSTSSRTLMDSLKRIDLVIKNAPKLYGLRKLRKILPCQIAPY
LIQALSSVFTHEQQGLRTTICLSLAKLYSHHKQYEKAIVYMMKALDSVSCKPEETINYLV
SLAWLYILYRQYDVALAILNAVIDSSWINPQQLGIAYNMLAIALKRTNNTKGAAESYYKA
LCLSEETNMTHNQAIALGNFGALCLHVAASKLAEHYYIRAVKLFSKLPSMDCGQDFIQVL
LQLGCYYVGGSQREKGRFYYEWAFLVAMETSHLESQLQAIKLLCQFYSTIVPNEAQCVIY
NEYQLSLARKMSNKVLEGQILETISQLYLSLGTERAYRSALEYTKRSLGIFIDLQKKEKE
AYAWLRAGKIYYVLRQNELVDLYIQVAQDVALYTGDPNLGMELFEAAGDIFFNGTWEKEK
AVTFYRDRALPLAVQTGNRNTELRLCNKLVELLVNLEAYEESLEYARASLMLSVNLGNQL
NERIAYHRLAAIHHHLGHCELAEHFYLKALSLCSSPLEFEEETLYYVKVYLILGDIIFYD
LKDPFDAAGYYHLALAAAMDLGNKKAQLKIYTRLAIIYHNFLVDREMSLFFYQKARSFAT
ELNVRRINLAPHQCLKSS
NT seq
4017 nt
NT seq
+upstream
nt +downstream
nt
atggagagtttggtggtgggaggcagcacatctgtgctcggagctgacaccatcgtcccg
tgtccagagggaaagcaagatgggaacctggagaggaaaggaatggaacagggaaggtgc
gggtctggctggaattgtgtggagaccagtgttgccaccagcactaacagcgatggagtc
aggatggacatgttgcaagaacaaatggagtattctcaaagtgaaaaatgcatggatgtc
tgttcaaggacccttcccagtcaagcagagaattttccaactgtatccttctccagatat
ctccctgaagttnnnnnnnnnnncagactccaaagacagctcagagggcagctccgtctt
ctggaaagtgacagcatggaggtgacagcagttttcagtgagctctctgctagactgctg
tctattcatagtgatcaagatctaatagtggtgacatttaaaacttttgaagaaatatgg
aagtttctaacctactactcactaggttttataaatcattgcatggagaatttattccta
gatcaatctttctggctctattctcaagaggaggaagaaacaggcattaaagtctgtata
aatgaaaaatcattaaatttgatgtacagaagcctgctagtacaggaagagtcatttttt
gttctatgtcatgacaacctgataagaaagataattgctacagacaatgaaatcaacact
tatttggagactggggcttttactgaagatgtaacagttgaatctgtggaaggtgacaca
actgtgctgtctaatgcttctctggagccactgatcccttttcatcaatggtttcttaaa
gggtattctaattctattgatttaccatacaaaactgaatctaaacccatcaggaaagtt
gatgagaagatccattcaaacatcagcatggcaatgggatcctgtctcgctgtgatgaat
tatgaaagtattgcgttggaagagataagtttccaggaaggggacaaaattgagatcctt
ggatacttcattgaatgcatggagtggtttcttggaagacatgtgtttactggccaaata
ggttttgtaaagacaagtcatgttaaactggatttatctaaaaataaaccacaagacctg
gattttcttgatgcagaagagctatcttttttttcaaaagaaaaaaatttggaagaagtg
atacatatgttgaaacaaactgccatcacagatatttgctctgtttatcgaatagatcaa
ttagaagaaccagaacttcagaaagctcatgaatgtgaaatcccatgttcacattctggt
acaggatccactaacaagaatggcaagatagaagaattcctgaagaatttcaagaattta
gaggccacacagacagaggagccagctactgaaggaaaggattctgctagcgctgcaaat
atggaagtctttcctccacctgaaggaccttgcttccacatttgccaaaatgatattcaa
gcatctgatatctctgagtcattgttattcttcttagataggagagagtatgatagaaac
ttcagaaacctctatgaattctcttatccatttatcaatagcatgttttatgggttttca
gaagaagatgatctggttagcttttttagattagcaagggaagctgcaaagaaagcaggt
atgtcctgggcgctagcaaggctctgctttctcttaggtaggctcagcattaaaaagttg
aaactttcccaagctcgggtatattttgaggaagcgttgggagcagtagctggagggttt
agtgatttgtactttgtaattgctctttatacaaatctgacagtcatctacttgacacag
aagaacaaagaaaaatgtgcccatgtttttgacaaggctgcatctcttctcatgggaatt
cccaactacatttgcagtgctgatctggagtcggatattctaaagtatgctctgcagagg
gcaattttgagccagaacaaacaagcagaggcaagggcatgctttctactggcaaaacat
tacagtgcacacaaacagcatgaagaggcactgccattcttggaaaggtttcaactgttg
cttgatgacttgggtttacaaaacaacttactgaatgaaagttatttcaaactggcagag
tcctacaatgaaaagtgtttgccgcacattgtgttaagctgcataaaggttgcctcttcc
acgagctccaggactttaatggattccttgaaaaggattgatttagtcatcaaaaatgct
cccaagctctatggtctgagaaaactcaggaaaatactaccatgccaaatcgcaccttac
ctcatacaagcactttcctctgtgtttactcatgagcagcaaggactacgcactactatc
tgccttagcttagcaaaactgtacagccaccacaaacagtatgaaaaagccattgtttac
atgatgaaagcactggactctgtttcttgtaagccagaggaaactattaattatttggtt
tcacttgcttggttatacattctttacagacaatatgacgtggcattagccattttaaat
gctgttatagactcttcatggatcaatcctcaacaactaggcattgcttataatatgctt
gctattgctttgaaaagaaccaacaatacaaaaggagctgccgagagctactacaaagcg
ctgtgtctttcagaagagaccaatatgacccataaccaagcgatagccttgggtaatttt
ggggctctctgcctgcatgtagcagccagcaagctggcagaacattattatatcagggca
gtgaagttgttctccaaacttccaagtatggactgtggccaagactttatccaagttctc
cttcagctgggatgttactatgttggtggaagtcaaagagaaaaaggaaggttttattat
gaatgggcttttttagttgcaatggagacaagccatctggaaagtcaactacaagcaatt
aaactgctctgtcagttctacagtacaattgttcccaatgaggctcagtgtgtcatctac
aatgaataccaactatctttagctagaaagatgtccaacaaagttctggagggacaaatt
ttggaaacaatcagtcagctctatttgtctttaggaacagaaagggcctacaggtcagct
ctggaatataccaaaagaagccttggaatatttatagatctccagaaaaaagagaaagag
gcatatgcttggctacgggcaggaaagatatattatgtgctgaggcagaatgagcttgtg
gatctttatattcaggttgctcaggatgttgctctttacacaggagatccaaatttagga
atggagttgtttgaagctgctggagacatatttttcaatggtacttgggaaaaggagaaa
gcagtgactttctacagggacagggctcttccacttgctgttcagactgggaacagaaac
accgaactcagattatgcaacaaactggtggaattgctggtgaatctggaggcttatgag
gaaagtctggaatatgcaagagcatctctcatgctcagtgtgaatttaggaaatcagcta
aatgaacgaatagcttaccatcggctggctgccatccatcatcatttgggtcactgtgaa
ctagctgagcacttttatttaaaggccttgtccctctgttcctctcccctggagtttgag
gaggaaacattatattacgtcaaggtgtacttgatcttaggagacattatattctatgac
cttaaggatcccttcgatgcagcaggctactatcatttggcacttgctgctgccatggac
ctgggcaataaaaaagctcaactgaagatttacacaagacttgcaataatctaccataac
ttccttgtggatcgggaaatgtctctcttcttctatcaaaaggcaagatcctttgcaaca
gagctgaatgttaggagaataaatctagctcctcatcagtgtttaaagagttcataa
DBGET
integrated database retrieval system
