KEGG   Columba livia (rock pigeon): 102096777
Entry
102096777         CDS       T02912                                 
Symbol
RAE1
Name
(RefSeq) mRNA export factor isoform X1
  KO
K14298  mRNA export factor
Organism
clv  Columba livia (rock pigeon)
Pathway
clv03013  Nucleocytoplasmic transport
clv05164  Influenza A
Brite
KEGG Orthology (KO) [BR:clv00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    102096777 (RAE1)
 09160 Human Diseases
  09172 Infectious disease: viral
   05164 Influenza A
    102096777 (RAE1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:clv03019]
    102096777 (RAE1)
   03036 Chromosome and associated proteins [BR:clv03036]
    102096777 (RAE1)
Messenger RNA biogenesis [BR:clv03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    Nuclear pore complex
     102096777 (RAE1)
Chromosome and associated proteins [BR:clv03036]
 Eukaryotic type
  Centrosome formation proteins
   Spindle formation proteins
    102096777 (RAE1)
SSDB
Motif
Pfam: Beta-prop_THOC3 Beta-prop_WDR5 Beta-prop_EML_2 WD40 Beta-prop_WDR3_1st WDR55 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_WDR36-Utp21_2nd Beta-prop_WDR3_2nd EIF3I Beta-prop_CAF1B_HIR1 WD40_Gbeta Beta-prop_TEP1_C Beta-prop_TEP1_2nd Beta-prop_RIG_2nd Beta-prop_EML Beta-prop_WDR36-Utp21_1st Beta-prop_Aladin WD40_RFWD3 Beta-prop_RSE1_2nd ANAPC4_WD40 Beta-prop_WDR41 Beta-prop_ACSF4 NBCH_WD40
Other DBs
NCBI-GeneID: 102096777
NCBI-ProteinID: XP_005499674
LinkDB
Position
Unknown
AA seq 368 aa
MSLFGSTSGFGTGGTSMFGSTTADNHNPMKDIEVTSPPDDSISCLAFSPPTLPGNFLIAG
SWANDVRCWEVQDNGQTIPKAQQMHTGPVLDGCWSDDGSKVFTASCDKTAKMWDLNSNQA
IQIAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSPTPMMTLQLPERCYCADVVH
PMAAVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKVNKPTGFALGSIEGRV
AIHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFW
DKDARTKLKTSEQLDQPISACCFNHNGNIFAYASSYDWSKGHEFYNPQKKNYIFLRNAAE
ELKPRNKK
NT seq 1107 nt   +upstreamnt  +downstreamnt
atgagtctgtttggatcaacatcggggttcggtacgggaggtaccagcatgttcggcagt
acgactgcagataaccataatcccatgaaggatattgaagtaacatctccacctgatgac
agcatatcatgtttagcgtttagtccaccaacattgccgggtaatttcctcattgcagga
tcatgggcaaatgatgttcgctgctgggaagttcaagataatggacagacaatcccgaag
gctcagcagatgcacacagggcccgtactagatggctgctggagtgatgatgggagtaaa
gtatttactgcttcctgtgataaaactgccaaaatgtgggatctcaacagtaatcaggct
attcagattgcacaacatgatgctcctgtgaagaccatccattggattaaagcacctaat
tatagctgtgtgatgacaggaagctgggataaaactttgaagttctgggatacccgttca
ccaacacctatgatgacattgcagctccccgagcgatgttactgtgcggatgtggttcat
cccatggctgctgtggccactgcagaaaggggtttgatagtttatcagttagagaatcag
ccttccgaatttcgaagaatagaatctcctcttaaacaccagcatcgctgtgttgctatt
tttaaagacaaagtgaacaaacctactggatttgcccttggaagtattgaaggaagagta
gctattcattacatcaaccccccaaatcctgcaaaagataatttcacttttaaatgtcat
cgctccaatggaacaaacacatcagcacctcaggatatctatgctgtaaatgggatagca
tttcaccctgtccatggtactcttgcaacagtaggatctgatggtagattcagcttttgg
gataaagatgcgcgaacaaagctaaaaacatcggaacaacttgaccagccgatatctgct
tgttgtttcaaccataatggcaatatatttgcatacgcttccagttacgattggtcaaag
ggtcatgaattctataatccacaaaagaaaaactacattttcttgcgaaatgcagcggaa
gagttaaagcccaggaataagaaatag

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