Columba livia (rock pigeon): 102096849
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Entry
102096849 CDS
T02912
Symbol
SPATA13
Name
(RefSeq) spermatogenesis-associated protein 13 isoform X1
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102096849 (SPATA13)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102096849 (SPATA13)
Membrane trafficking [BR:
clv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102096849 (SPATA13)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
Myosin_TH1
PH_5
Motif
Other DBs
NCBI-GeneID:
102096849
NCBI-ProteinID:
XP_005501496
LinkDB
All DBs
Position
Unknown
AA seq
1426 aa
AA seq
DB search
MCFLELQIIRAVHLAKPFGHHTSLGSRTVQQGTHCDFKGIPLAVASGSTFPGITLAFWSP
CVQKPTRLQNPAPVLPALVRCHRWPWDAVLSSTVNPTFRKAVQPEELSSPRRCESKTNQG
AADEEEATRSADGDSSVTLSYPSLSLHAYSIENMTTFPNSCGNGSAITCVVMDNKVSVNQ
GTCVSHNGGYSTSNSHEEDIQEDKLNPSKIMRFFTTPRKRANSSSDRPRSLVLMGNSSTW
NALSSIKKMGSFKKLKSSVLQGIQTKECSDILNENTVDKHGSNGEVMRVQTNRYSYSGPL
HDFQNTVDGLASDCSDAEESDESFLRNTHRSRSIRRAYGAGRINLLDTDEVQSHHNCTRP
TSPVIAEPKICEILVKDSENNRIIYRRSKSSDNLNFLKKSSFKRKSTSNLTDLKVGNEKQ
MPTRAVSVTSADSEKTSGNAERRSKRWKSPIRAKDFDRVLKLVSNVTDVAWKKDASKSMA
PSPSEQSQRTRSNSRLHDDYSRRVSSSTDHDRKRCTSPVSSPDSSLPGTPCLQSPTVAQD
KEAEMNVAVAEDRSLRTSSGIPDSDSLSPTLNDISPFPNEVFYSDSDEPKATQQFTYEAE
NPHAPVRPTTPKPQSPTAEKVKCNMNFQCPNHHSTLSLSSSESEERVEVPGMKLGRNPVC
FQDSVQTVYYDDGNEDSGISSHSQLSLNLASGAEEKKEEVVSDDHWKKSSCQDEEKTDTQ
RVAPRRWGSGKRSRPRPLSDYGQMSIRSLSIPEDTVALESQKTDCTDGENHPGLASVRSA
IQSNTVGYHRGRKRRPISVIGGVNFYGSGPAEEIEGLLTQPATRPPVPAHQVPPYKAVSA
RFRPLTFSQSTPIGLDRVGRRRQMRTSNVATDGGTESSALVDDNGSEEDYSYEELCQATP
RYLQPGGEQLAINELISDGSIVYAEALWDHVTMDDQELGFKAGDVIRVLEASNKDWWWGR
NEDKEAWFPASFVRLRVNQEEVPENGSSIQDEEQDADMSKHRQKIAENKDQMRTNVIQEI
MNTERVYIKHLKDICEGYIRQCRKHTGMFTAAQLSTIFGNIEDIYKFQRKFLKDLEKQYN
KEEPHLSEIGSCFLQHQEGFAIYSEYCNNHPSACIELSKLMKQGKYRHFFEACRLLQQMI
DIAIDGFLLTPVQKICKYPLQLAELLKYTTQEHSDYNNIKAAYEAMKNVACLINERKRRL
ESIDKIARWQVSIVDWEGPDVLARSSELIHSGELTKISKQGKSQQRTFFLFDHQLVFCKK
DLLRRDILYYKDRIDMDEMEIVDTEDGRDKDFNINVKNAFKIINRATEDIHLFCAKKQED
KKRWMEACENERRRVQEDKEMGMEISENQKKQAMQNARKSRHGKIKGVSYNGCPVPPPHQ
SLHPIHQRHITVPTSIPQQQVFALAEPKRKPSLFWHTFNKLTPFKK
NT seq
4281 nt
NT seq
+upstream
nt +downstream
nt
atgtgttttttggagctgcagataatccgtgcagttcacctagcaaagccatttgggcat
cacacgtcgctgggctcacgcactgtacagcagggcacacactgcgacttcaaggggatc
ccactggcagtggcatcagggagcacattccctggcatcaccctggcattctggagcccc
tgtgtgcagaaacccacccggctgcagaacccagccccggtgttgcctgcactggtgcga
tgtcaccgatggccctgggatgcagtactgtcttccactgtgaatccaacatttcgaaag
gcagtgcagcctgaggagctgagctcacccaggcgatgtgaaagcaagacaaaccaaggt
gcagcagatgaagaagaggcaacgaggtcagctgatggagacagcagtgtcactctgagc
taccccagcctcagtctccatgcgtacagcatcgagaacatgacaacgtttccaaatagc
tgtggaaatggcagtgccattacttgtgtagttatggataataaagtctccgtaaaccaa
ggtacctgtgtcagtcataatgggggatacagcaccagcaacagtcatgaggaggacatt
caagaggataagctcaacccttccaaaatcatgcgctttttcaccacccctcgtaaacgg
gctaattccagctctgacaggcctcgttccctggtgttgatgggcaactcgtccacgtgg
aatgctttgtcttctatcaaaaaaatgggatctttcaagaaattgaaatcttcagttctc
caaggaattcaaacaaaggaatgctcagacatcttaaatgagaacactgtagacaaacat
ggctcaaacggggaagtgatgagagttcagactaacaggtattcttattcagggccttta
catgatttccagaacacagtggatggtttagcttctgactgctctgatgcggaggagagc
gatgagtctttcctgaggaatactcatcgctcacgcagcatccggcgggcttatggtgct
ggccgcataaacttgctagacacggatgaagttcagagtcatcacaactgtactaggcca
acatcacctgtcattgcagagccaaagatctgtgaaattttggtgaaggactctgaaaac
aacaggatcatttatcggagaagcaaaagttcagataatttgaactttctgaaaaaaagc
tcattcaaacggaaatccacctcaaacctcaccgacctcaaggttggaaatgaaaaacag
atgccaacaagggctgtgagtgttacttctgctgactcagaaaagactagtgggaatgct
gagaggagatccaagcgatggaagagccctatcagggcaaaagattttgaccgagttttg
aaacttgtcagtaacgttacagatgtcgcatggaagaaggatgcctctaagagcatggct
ccttctcccagcgagcagtcccagagaacaaggtcaaacagcagactgcacgatgactac
tcccgcagggtttccagcagcacagatcatgacagaaagagatgcacctccccagtgtct
agtccagactcttccttgccaggaacaccttgtctgcaaagccccacggttgcgcaggat
aaagaggctgagatgaatgtagctgttgctgaagacagaagcctcaggacgtcatcaggt
atcccagactctgatagcttatcacccacactgaatgacattagtccatttcccaatgaa
gtgttttattcggactcagatgaaccaaaagctacccagcagtttacgtatgaagctgaa
aaccctcacgctccagtcaggccgactactccaaagcctcaaagtcccactgcagagaag
gtgaagtgcaatatgaatttccagtgcccaaaccatcacagcacattgtcactgagctca
tcggagagtgaggagagggttgaggtaccggggatgaagctcggcaggaatcctgtttgc
ttccaggactctgtgcaaactgtgtactacgatgatggaaatgaagatagtggcataagc
agccactctcagctgagcctcaatttagcctctggtgctgaagagaaaaaggaagaggtt
gtttctgatgaccactggaagaagtcctcatgccaggatgaagaaaagacagacacacaa
agggtcgcacccaggagatggggctctggaaaaagatctcggcccagacctctctcagac
tatggccaaatgtcgatcagaagtctctctataccagaagatacagttgcattggagtct
cagaagacagactgcacagatggagaaaatcatccaggactggcttccgtcaggtctgcg
atccaaagcaatacagtaggctaccacagagggcgaaaaagaagacccatctctgtaata
ggtggggtcaatttctatggcagcggtccagcagaagagatagaaggtctgctgacacaa
cctgcaacacggccacctgttccagcacaccaggtccccccttacaaagctgtttccgcc
aggttccggcccctcaccttttcacaaagtacccccattggcctggaccgggtgggacga
aggcggcagatgagaacatccaatgttgctacagatggcgggactgaatcttcagcctta
gtggatgacaatggcagtgaggaagactacagttacgaggagctctgccaagccaccccc
aggtacctgcagcccggaggggaacagctagccattaatgagctgatcagcgatggcagc
attgtctatgcagaagctctctgggaccatgtgactatggatgatcaagagctgggcttc
aaagctggagatgtcattagagtcctagaagcttccaacaaagactggtggtgggggaga
aatgaggacaaggaagcctggtttccagcgagctttgtcaggctgcgagttaatcaggaa
gaagtgccagaaaacggtagtagtatccaggatgaagaacaagatgcagatatgagcaag
catcgtcagaaaatagctgaaaacaaggatcagatgagaaccaacgttatacaggaaatt
atgaacacagaaagagtctatatcaagcatctcaaggacatctgtgagggttatattcgg
cagtgtcgtaaacatacaggaatgttcaccgcagctcagttaagcaccatttttggaaat
attgaagatatttacaagttccaaaggaagtttctgaaagatcttgagaaacagtacaac
aaagaggagcctcatctgagtgaaatagggtcatgttttcttcaacaccaagaaggcttt
gctatttattcagagtattgtaacaatcatcccagtgcctgcattgaactttccaaacta
atgaaacagggcaaataccgtcacttctttgaggcctgtcgcttacttcagcagatgatt
gacattgccattgatggttttcttctcacacctgttcagaaaatctgcaaataccctctg
cagctcgcagaattgctcaaatacaccactcaggagcacagtgattataataacataaaa
gctgcatatgaggctatgaagaacgtagcgtgtctgatcaatgagcgaaaacgaagacta
gaaagcatagacaagattgcacgttggcaagtctctatcgtagactgggagggaccagat
gtgttagccagaagctctgaactgatccactcaggagaactgaccaaaatatcaaagcaa
ggcaaaagccagcagaggactttcttcctttttgaccaccagctcgtgttctgcaagaag
gacctactgaggagggacatcttgtattataaggatcgtattgacatggatgagatggaa
attgtggacactgaagatggcagagacaaagactttaacattaatgttaagaacgctttt
aagataataaacagagcaacagaggacattcatttgttctgtgcaaaaaaacaggaggat
aaaaagagatggatggaggcttgcgaaaatgaaaggagaagagttcaggaagacaaggaa
atgggaatggaaatctcagaaaaccagaagaaacaagctatgcagaatgcccgtaagtca
aggcatggaaaaattaaaggtgtcagctataacgggtgtcctgtgcctcccccacaccaa
agcctgcatcctatccatcagcgccacatcactgtgcccaccagcatcccgcagcagcag
gtttttgccctggcagaacccaagcggaagccatccctcttctggcacaccttcaacaaa
ctcacccccttcaaaaagtga
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