KEGG   Columba livia (rock pigeon): 102096917
Entry
102096917         CDS       T02912                                 
Symbol
ITGB5
Name
(RefSeq) integrin beta-5
  KO
K06588  integrin beta 5
Organism
clv  Columba livia (rock pigeon)
Pathway
clv04145  Phagosome
clv04148  Efferocytosis
clv04510  Focal adhesion
clv04512  ECM-receptor interaction
clv04810  Regulation of actin cytoskeleton
clv04820  Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:clv00001]
 09130 Environmental Information Processing
  09133 Signaling molecules and interaction
   04512 ECM-receptor interaction
    102096917 (ITGB5)
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    102096917 (ITGB5)
   04148 Efferocytosis
    102096917 (ITGB5)
  09144 Cellular community - eukaryotes
   04510 Focal adhesion
    102096917 (ITGB5)
  09142 Cell motility
   04820 Cytoskeleton in muscle cells
    102096917 (ITGB5)
   04810 Regulation of actin cytoskeleton
    102096917 (ITGB5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:clv04131]
    102096917 (ITGB5)
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:clv04515]
    102096917 (ITGB5)
Membrane trafficking [BR:clv04131]
 Endocytosis
  Phagocytosis
   Integrins (complement receptors)
    102096917 (ITGB5)
Cell adhesion molecules [BR:clv04515]
 Integrins
  Integrin beta subunits
   102096917 (ITGB5)
SSDB
Motif
Pfam: Integrin_beta Integrin_B_tail Integrin_b_cyt EGF_integrin I-EGF_1 EGF_2 EGF_Teneurin EGF_TEN vWA_SIBA-E WD40_Apc4_C_fungal
Other DBs
NCBI-GeneID: 102096917
NCBI-ProteinID: XP_005505182
LinkDB
Position
Unknown
AA seq 656 aa
MDLSLSMNDDLDNIRNLGTKLAEEMRKLTSNFRLGFGSFVDKNISPFSYTAPRYQNNPCI
GYKLFPSCVPSFGFRHLLSLTDKVDRFNEEVQKQKVSRNRDAPEGGFDAILQAAVCKEKI
GWRKEASHLLVFTTDDVPHIALDGKLGGLVQPHDGQCHLNEANEYSASSQLDYPSLALLG
EKLAENNIHLIFAVTKSHYVLYKNFTALIPGTTVEILHKDSKNIIELIVKAYNSIRSKVE
LTVWDSPEDIGLTFTATCQDGLSYPGLRKCGDLKIGDTVSFEVAVEARSCPAEDTSHIFT
IKPAGFRDTLEVAVTYNCLCGCTGRATPASGKCSGNGTYACGLCECDAGYLGARCECEEG
ASGDMHHAMCREAEGKPLCSGRGECSCNQCLCHESEFGNIYGPFCECDDFSCARYKGVLC
SGHGECHCGECKCHAGYIGDNCNCSTETDSCVSSDGQMCSGRGTCVCGKCQCTEPGAFGE
TCEKCPTCPGVCSTKRDCIECKLFNSGRLADNQTCQKHCKDEIITTVDVLETDDPNAILC
AYPVNNCVMKFTYSELASGKSNLTVLKEPACSSAPSAVTIVLAVIGSVVLIGIILLGLWK
LLVTIHDRREFDRFQSERSRARYEMASNPLYRKPISTHNVEFTFNKLNKSYNGTVD
NT seq 1971 nt   +upstreamnt  +downstreamnt
atggatctctccctgtccatgaacgatgacctggataatattcgcaatctggggaccaag
ctggctgaagagatgcgaaaactcactagcaatttccgtctgggatttggctctttcgtg
gacaaaaatatttctcctttctcctatacggcaccaagataccaaaacaatccctgcatt
ggttacaagctgttccccagctgtgtcccgtcctttggcttccgccacctcttgtcccta
acggataaagttgaccgtttcaatgaagaagttcagaaacagaaggtttcccgcaaccga
gatgctcctgagggcggttttgatgcgattttgcaggctgctgtgtgcaaggagaagatc
ggctggcgtaaggaggcatctcacctgctggtcttcacgacagatgatgtgccccacata
gccttggacgggaagctggggggcctggtgcagccccatgatggccagtgccacctcaat
gaagccaacgagtacagcgcatccagccagctggattatccttctctggcacttcttgga
gagaaacttgctgaaaacaacatccacctgatttttgctgttacgaaaagtcattatgtc
ctgtacaagaactttactgccttgattcctgggacaacagtggagattttgcacaaagac
tccaagaatataattgaactcatcgtcaaggcctacaatagcattcggtccaaggtggag
ctcacagtctgggacagtcctgaggacattggcttgaccttcacggccacatgccaggat
ggattgtcctatcccgggctgaggaagtgtggggatctcaaaataggagatacggtgtcc
ttcgaggtggccgtggaggcccggagctgccctgctgaggacacctcccacatcttcacc
atcaagcccgctggctttcgggacacgctggaggtggcggtgacctacaactgcctctgc
ggctgcaccggccgggccaccccagccagcggcaagtgcagcggcaacgggacctatgcc
tgtgggctgtgcgagtgcgacgctggctacctgggggccaggtgtgagtgtgaggagggg
gccagcggggacatgcaccacgccatgtgccgggaggcggagggcaaacccctctgcagc
gggagaggggagtgcagctgcaaccagtgcctctgccacgagagtgagtttgggaacatc
tacgggcccttctgcgagtgtgatgacttctcctgtgccagatacaagggagtcctctgc
tcaggccatggagagtgtcactgcggggagtgcaagtgccatgccggctacatcggggac
aactgcaactgttccactgagacggacagctgtgtttccagtgacgggcagatgtgcagc
ggcaggggcacctgtgtctgtgggaagtgtcagtgcaccgagccaggggcttttggagag
acgtgtgagaaatgtcccacctgcccaggcgtttgtagcactaaaagggactgcattgaa
tgcaagctgtttaactcaggaagactggctgataaccaaacctgccaaaagcactgcaag
gatgagatcatcaccacagtggatgttcttgaaacagatgacccaaacgcaatcctctgt
gcctacccggtgaacaactgcgtcatgaagttcacctactcggagcttgccagtgggaaa
tccaacctcaccgtcctcaaagagccagcatgcagctcagcccccagcgccgtgaccatt
gtgctggcggtgatcggcagtgtggtgctgattggcatcatcctgctggggctctggaag
ctgctcgtcaccatccatgacaggcgggagttcgaccgattccagagtgaacgttcccgg
gcccgatatgaaatggcatctaatcctctctaccgaaagcctatttccacgcataacgta
gagttcacattcaacaagctcaacaagtcttacaacggtacagttgactga

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