Columba livia (rock pigeon): 102097026
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Entry
102097026 CDS
T02912
Symbol
PCDH8
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-8
KO
K16499
protocadherin delta 2
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clv04515
]
102097026 (PCDH8)
Cell adhesion molecules [BR:
clv04515
]
Cadherins
Protocadherins
102097026 (PCDH8)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_CELSR2_9th
TMEM154
Motif
Other DBs
NCBI-GeneID:
102097026
NCBI-ProteinID:
XP_013222242
LinkDB
All DBs
Position
Unknown
AA seq
989 aa
AA seq
DB search
MSPLRLLAVACLLALSHCKTVRYRTDEEGAPGTVIGTLADEMPVKAPGEMSFRLMRQFSN
SSLVRVREEDGQLSIGEGGLDRERLGGXVVSCWRERYRLVHVELEVRDINDNAPRFPRAQ
MTLEVSESAAPGTRLPLEVAVDEDVGSNSIQSFQVSLNSHFGVEAQTRADGARCADLVLL
QELDRERQPSYTLELVAKDGGSPARSGTATVHVRVLDANDNSPAFAQGSVTVELPEDAPP
GSLLLDLDAADPDEGPNGEVVYAFGSQVPPEARRLFRLDPRSGRLTLEAAVDYERTRTYE
LDVRAQDRGASPRTATCTVIVRLTDVNDNAPRISISALRGAASAAGVAYVSEAAASESFV
ALVSASDRDSGANGQVRCSLRGHDHFALQRAYEDSYMIVTTAALDRERIPEYNLTVVAED
LGSPPFKTVRQYTVRVSDENDNAPLFAKPLYEVAVPENNPPGAYITTVVARDPDLGHNGK
VTYRLLETQVMGAPISTYVSVDPATGAIYALRTFNYEILKQLDLRIQATDGGSPQLSSST
LVKVRMVDQNDNPPVIIHPVLTNGTVEIGVSSKTSRDSLVAQIKARDADDGANAELTFAF
LEEPQQDLFTINPSTGEIVLRGDLSEELGQLFKVILTVTDNGRPPLATTATVNFLVTATA
PSSIQELAKPSSWEGKALQWDIPLIVIIVLAGSCTLLLVAIITIATTCNRRKKGNEIKNN
ASLKDQIDISHLEKGRQEEGSQRGNVFEVRTFPSKTSFTSPDPSPAAEEISTAESGIDST
CLYEGQKKLRGPSGEQGIAAAPSYSKEPAPPVAIWKGHSFNTISGREAEKFSGKDSGKGD
SDFNDSDSDISGDALKKDLITHMQNGLWACTAECKILGHSDRCWSPSCGRANPHPSPHPS
APLSTFCKSTSLPRDPLRRDNFYQAQLPKTVGLQSVYEKVLHRDFDRTITLLSPPRPARL
PDLQEIGVPLYPAPSTRYLGPQTETAEKV
NT seq
2970 nt
NT seq
+upstream
nt +downstream
nt
atgagccccctgcggctgctggccgtcgcctgcctgctggcactgtcccactgcaagacg
gtgaggtaccgcaccgacgaggagggcgcgccgggcacggtgatcggtacattggccgac
gagatgccggtgaaggcgccgggggagatgagcttccgcttgatgcggcagttcagcaac
agctcgctggtgcgggtgcgggaggaggacgggcagctgagcatcggtgaaggggggctg
gaccgggagcggctgggcgggngagtggtgagctgctggcgggagcgctaccgcctggtg
cacgtggagcttgaggtgcgtgacatcaatgacaacgcaccccgcttcccccgtgcccag
atgacgctggaggtgtcagagagcgctgcacctggcacccgcctcccgctggaggtggct
gtagatgaggatgtgggctccaactccatccagagcttccaggtctcactcaacagccac
tttggtgtggaggcacagacacgggcagatggagcacgctgtgctgacctggtgctgctc
caggagctggaccgcgagcgccagccctcctacacactggagctggtggccaaggatggt
ggcagtccagcacgctcgggcacagccactgtgcatgtccgtgtcctcgatgccaacgac
aacagccctgcctttgcccagggctcggtcacggtggaactgcccgaggatgcgccacct
ggctctctgctgcttgacctggatgccgctgaccctgacgagggccccaatggcgaggtg
gtctatgcctttggcagccaggtgccccccgaggcacggcggctcttccgccttgaccca
cgctcgggtcgcctcacgctggaggccgccgtggactatgagcgcacccgcacctatgag
ctggatgtgcgtgcccaggaccgcggcgccagcccccgcaccgccacctgcaccgtcatt
gtgcgcctcactgatgtcaatgacaacgcaccgcgcatcagcatcagcgccctccgtggt
gctgccagtgccgctggcgtggcctacgtcagtgaggcagcggccagcgagagcttcgtg
gcccttgtcagcgcctcagaccgtgactcgggtgccaatgggcaggtgcgctgcagtctc
cgaggccacgaccactttgccctgcagcgtgcctacgaggacagctacatgattgtcacc
acagccgcactggaccgcgaacgcatccctgaatacaacctcactgtggtggctgaggac
ctgggctcaccacccttcaagaccgtccgccagtacacagtgcgggtgagcgatgagaat
gacaatgcgccactttttgccaagcctctctacgaggtggccgtgccagagaacaatccc
ccaggcgcctacatcaccactgtggtggcccgtgaccctgatctcggccacaacggtaag
gtcacctaccggcttctggagacacaagtcatgggggcccccatctccacctatgtctca
gtggaccctgccactggggccatctatgccctcaggacgttcaactatgagatcctcaag
cagttggacctgaggatccaggccactgatggtgggtctccacagctctccagcagcacc
cttgtcaaagtgaggatggtggaccagaacgacaatcctcctgtcatcatccacccagtg
ctcaccaatgggacagtggaaattggtgtgtccagcaagacctcccgcgactctctggtg
gcgcagatcaaagctcgagatgcagatgatggggccaatgctgagctcacctttgccttc
ctggaagagcctcagcaggaccttttcaccatcaacccaagtactggggagattgtgctg
aggggtgacctctctgaagagttgggacagctgttcaaggtcatcctcactgtgacagac
aacggcagacccccactggctacaaccgccacagtaaacttcctggtgaccgccactgct
ccttccagtatccaggagctagccaagcccagctcctgggaaggaaaggctttgcagtgg
gacatccctctgatcgtgatcatcgtcctggcaggcagctgcaccctcctcctggtggcc
ataatcaccatcgccaccacctgcaacaggcgcaagaaagggaacgagatcaaaaacaac
gcttccttgaaggaccagatagacatctcccacctggagaagggccggcaagaggagggc
agccagaggggcaatgtgtttgaggtacgaacctttccaagcaaaacctctttcaccagc
cccgacccttctccagctgctgaagagatttccactgctgagagtggcattgacagcact
tgcctctacgagggtcagaagaagctgagaggaccaagtggggagcagggtattgctgct
gctccaagctacagcaaggagcctgctccccccgtggccatttggaaggggcactcgttc
aacaccatctctggccgagaggcagagaagttcagtggcaaagacagcggcaaaggcgac
agtgattttaatgacagtgactcggatatcagcggagatgctctgaagaaagatctcatc
acgcacatgcagaacggtctgtgggcatgcacagccgagtgcaagatcctgggccactca
gaccgctgctggagcccctcctgcggccgagccaaccctcatccttctccccatccttcg
gcacccctctccaccttctgcaagagcacatccttgcccagggatccccttcgcagggac
aacttttatcaagcccagctgcccaaaacagtggggcttcagagcgtctacgagaaagtg
ctgcacagggactttgaccggacgatcacgctcctctccccaccacgccccgcacggctc
cctgacctccaggagatcggggtgcccctctacccagccccctcaactagatacctgggc
ccccagactgagacagctgagaaggtgtag
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