Columba livia (rock pigeon): 102097462
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Entry
102097462 CDS
T02912
Symbol
FREM1
Name
(RefSeq) FRAS1-related extracellular matrix protein 1 isoform X1
KO
K23380
FRAS1-related extracelluar matrix protein 1/2
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
102097462 (FREM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04091 Lectins [BR:
clv04091
]
102097462 (FREM1)
Lectins [BR:
clv04091
]
C-Type lectins
Lecticans
102097462 (FREM1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin_3
Frem_N
Lectin_C
Calx-beta
Beta-prism_lec
Motif
Other DBs
NCBI-GeneID:
102097462
NCBI-ProteinID:
XP_021144499
LinkDB
All DBs
Position
Unknown
AA seq
2186 aa
AA seq
DB search
MKPFEKSWLFLLLLIVLRVVCSSFISVNLGVKVMKGQSVFLSEDDLKFSIPREKDVCKVE
VVINEPITQRVGKLTPQVFDCHFLPNEVKYTHNGCPILDEDVVMLRLYRFTETETFVETF
TLHVQLLEPDCNIIKMRSHALEVPEYYGLSRAIDKNVLTFDYDRKINLDCTISVVSLETH
LPAHGQLITGEVQQEHLHGDQPQSFFPGPKHSLGQPCRNGSCMLGLGVVHDTKMSCEEFL
RMGIRYRHLDPPSPDTDYIPVRLDLTDSRSKTLHKTEYAWLPVQIKGAIPNQIPKAASMA
KFILEVNQFILTPITTTTIDAEDNETPKSLLVFNVTKPPPQGFITHLSDHTKPIGSFTWK
DLSDMLIAYQPPNNSHTERKNYEVEFEVHDFYFERSLPITVHLSIRTTETNAPRVSWNTG
LSLLEGQSRPITWQHFQVVDNDNIQNVRLVTVDGLQHGQLTVRGGKGFIFTVSDIQAGVV
HYHHDDSDSTKDFVVFRIFDGLHSIRHKFPINILPKDDSPPFLISNVVIEVREGQMILIQ
GSMLHASDMDSSDDYILFNITKPPQAGEIMKKPGPNLIGYSVSSFLQRDLFNGIIYYRHL
GGEVFEDSLEFVLCDSHDPPNLSEPQVMMVHITSVDDQLPREAPGVTRHLVVKETEIAHL
TKKHLHFIDVEEQDRELTYTITTSPFFSCTHSHSDAGKLFMVDTIPKLVKDPAALALQSF
TQHAVNYMKIAYMPPLQDIGPEPQQVQFIFSISNQHGGTLYGICFNITILPVDNQAPEVF
TSHLRVEEGGLSPVTEGHILISDVDTKQEHLFLLLQKQPQHGVVELDGFPMKEGDRLSCG
DLRTLAVRYRHDGSETLTDVVLFAATDGIHFVEFILQVKVLPVNDEPPVMRTGLVPVLHC
LEGEEVVLSPDHIYATDADSDDMKLTFILSRQPYHGVVRKAGIAVDRFSQADVVSGLVTY
KHTGGEIGLTPSIEILTFVVSDGEAGLDVKGCCHDGPLPPPVLIHDPFPVYDLNITILPV
DNQPPSIATGARFVVEEGSSAALTTNHLFATDPDTSAEDLEFVLVSPPQFGYLENILPSP
GFEKSNIGISIASFQLKHLKALNINYVQARHMRMEPTADHFVLYVTDGLHRSAETPFFVL
INPTNDEVPEFIARNITVQEGEMRELDLSVINAVDLDVPQDHLVFGVVQGPWHGFIIKGV
DGNDIQHYKQLINRNQHRHGLLVHEFSMELLKNGMKLMYIHDNSENLTDSFKVQLSDGKH
KVLRTISVKVIPVNDEKPVLSKKVDIEVNMGETRIISSAVLSAEDKDTPREKIYYLFERL
PENGQLQLKVGQGWMTLQTGMKCTQEELDMNLVRYAHTGAIGSKKQDSFTFHLWDGYNRS
PAAEFYINIKDMEKGDIAVFIKPLRVSKGDRSYITTDVLLVLDGTDKPEELLYVITSPPQ
YGQIEYVSYPGIPIRSFSQMDVARHIVCYVHNTKAVVSEDSFRFIVSNGLRTKHGTFMIS
LEAVDQDLPTLSRNTGLRLVEGTTAFLSPDVLQLSDPDTAKENLTFLLAQLPQYGHLYYR
GTMLLQYNFTQQDVDNRDVAYKHGGGDSQTDRFTFVATDRTNQGFIMNGRVQSEPVAFTI
QVDHLDKIAPKIIHLHCFSDVEVLKSGNYGIYITARSLKASDPNTEDDKIMFRILRGPHY
GYLENITTGGFIQEWFSQKDLNSKIILYVINPSQKVNSDNIEFQVTDARGNSAVPQRLEL
QWSRIEMQQTEYEVCESAGVVSLKIARAGHSAQSAFIAVKVNEISATLGKDFTVTPSKLV
QFDPGMSTKTWNIAITYDGLEEDDEVFEVVLNSPVNAVLGTRTKAVVRILDSKGGQCSYS
HPSGQRKHDFSGRGTLLPVSSGFSSTPRPGTAPLEGIPLPPSKGMREHGGDLRQEHSLTN
QSRTRLRVIGNGRIVHPSSVFRNGTDVVFKYHGMVSLKIEDDSSSTKANKKAQVSVINQA
QPQINVVSSRKTEIPQADKAELASEPNSRHQDFNSFPKACTPDLKGLLHYEESTQKLFQC
DGIIWQFWNLQSKEVTMKKCPSGWSHHEGSCYLLVVNHKVTWNTAARACREQYLGSLASV
ANEQHMQWLWDFSGRKPFWIGLNDQVNPGHWEWNGGEPVTYINWRKGSYHFPKRGRNCVV
VQKRGKWQATDCRKVKRNSYMCSRKL
NT seq
6561 nt
NT seq
+upstream
nt +downstream
nt
atgaagccctttgagaaaagctggctgtttctactgctgcttattgtactaagagttgtg
tgctcctccttcattagtgtcaaccttggggtgaaagtgatgaagggacagtctgtcttc
ctgtcagaagatgacctcaagttttccatccccagagagaaggatgtctgcaaagtagaa
gttgtgatcaatgagccaataacacagagggttgggaaactcactccacaggtttttgac
tgtcacttccttcccaatgaagtcaaatatactcacaatggctgtccaattttagatgaa
gatgtggtcatgcttaggctgtacaggtttacagaaaccgaaacgtttgtagaaacattc
accctccatgtgcagttacttgaaccagactgtaacatcatcaaaatgcgctcccatgcc
ctggaggtccctgagtactatggtctgtccagggcgattgacaagaatgtcctcactttt
gactatgacaggaagataaatctggattgcaccatttccgtagtttctttggaaacccac
ctgcctgctcatggccagctcatcactggggaagtgcagcaagagcatcttcatggagac
cagccacagagcttcttccctggccctaagcacagcctgggccagccgtgcagaaatggg
agctgcatgctaggactgggagttgttcatgacacaaagatgagctgcgaagaatttttg
aggatggggattcgatatcggcaccttgatcctccttcgcctgacactgattatattcct
gtgaggctggatctcacagacagcagaagcaaaactctgcacaagactgagtatgcatgg
ctccctgttcagattaaaggtgctattccaaatcaaatacccaaagctgcctcaatggca
aaattcatcctggaagtgaatcaatttattttaacccccattacaaccacaaccattgat
gctgaagacaatgaaactccgaagtctttgcttgtattcaacgttactaagccacctcca
cagggcttcatcacccatctgtctgaccacacaaaacctattggctccttcacgtggaaa
gatctcagtgacatgctcattgcttatcagcctccaaataacagccacacagagagaaag
aattatgaggtagagtttgaggttcatgacttctactttgaaaggagtttaccgatcact
gtgcatctttctatcagaacaacagaaacaaatgctcctcgagtttcatggaatacaggc
ctcagcctcctggaagggcaatcccgacccatcacatggcaacacttccaagttgtagac
aacgataacatccaaaatgttcgcttggtcacagttgatggcttacagcatgggcagctc
acagtgagaggagggaaaggattcatattcactgtttctgacattcaggctggagttgtt
cactaccatcatgatgatagtgattctaccaaggactttgtggtatttaggatttttgat
ggactccacagtattcgccataagtttccaatcaatatcctccctaaagatgacagccct
ccattccttatcagcaatgtggtcattgaagtccgtgagggacagatgatcctgattcag
ggctccatgcttcacgcttctgacatggattccagtgatgattacatactattcaatatt
accaagccaccacaggctggagaaatcatgaagaaaccaggaccaaacctgatagggtat
tctgtcagcagttttcttcagagagatctgtttaatggaataatttattatcgtcatttg
ggaggagaagtatttgaagattcccttgagtttgtgctgtgtgacagccatgaccctccc
aatctctcagaaccacaggtgatgatggtgcacattacctctgtggatgaccagctaccc
agagaagccccaggagtgacccgtcacctggttgttaaggagactgagattgctcaccta
actaagaaacatctccacttcatagatgtggaagagcaagacagggaactcacatacacc
ataaccacttccccatttttctcttgcacacacagccactcagatgctgggaagctgttt
atggtggacaccatccccaagctggtcaaggatcctgctgctcttgcactgcagtcgttt
actcagcacgctgtgaactatatgaaaattgcctacatgccaccgctgcaggatattggg
cctgaacctcagcaagtccagtttattttttccatcagcaatcagcatggtggcactttg
tatgggatctgcttcaatattacaattcttcctgtggacaatcaagccccagaggttttt
acaagccacttgagagtggaagagggtggcctaagccctgtcacagaaggacacattctc
atctctgatgtggacacgaaacaggagcatctctttctcctcctgcagaaacagccccag
cacggggtagtggagctggatggctttcccatgaaggaaggtgacaggctttcctgtggg
gacctgcgtaccctggcagtcaggtatcggcatgatggttctgaaaccctcactgacgtt
gtcctctttgcagccacagacggcatccactttgtagagttcatactgcaggtcaaggta
ttgcctgtgaatgatgagccacctgttatgcgaacaggccttgttcctgtgctccactgc
ctggagggtgaagaagtggtcctctccccagaccacatttatgccacagatgcagacagc
gatgacatgaaactgacgtttatactgtctcgccagccctaccatggggtagtgaggaaa
gctggcattgctgtggatcgtttctcccaagcggatgtcgtctctggtttagtcacatac
aagcacactggtggggagattggcttgactccttccattgagatcttaacctttgttgtc
tctgatggtgaggctggcctggatgtgaaaggctgctgtcatgatggacctcttcctcct
ccagttctgattcatgatccatttccagtatatgaccttaatatcactatacttccagtg
gacaaccagcctccatcaattgcaactggtgcaaggtttgtggtggaggagggctcctca
gcagcccttaccaccaaccatttgtttgccactgaccctgacacctctgcagaggactta
gagtttgtcttggtttctcctccccagtttggttaccttgaaaacatactgccttctcct
gggtttgagaagagcaacattggtataagtatagcttcatttcagctgaagcacctgaaa
gccctgaacataaactatgtacaagccaggcacatgcgaatggagccaacagcagaccac
tttgtactttatgtcaccgatgggctgcatcgctcagcagagactccatttttcgtgctg
atcaacccaactaatgatgaagtcccagaattcatagcaaggaatattaccgttcaggaa
ggggagatgagagagttggatctctctgttatcaacgcagttgatctagatgtgcctcaa
gaccatttggtatttggggttgtgcaaggaccctggcatgggttcattattaaaggagtt
gatggcaatgatattcaacactataaacagttaattaaccgtaaccagcacaggcatggg
ttgcttgtccatgaattttccatggagctactgaagaatggaatgaagctgatgtacatt
catgacaattcggaaaacctcactgacagctttaaagtccagctatcagatgggaaacat
aaagtcctcaggacgatttcagtaaaggtcattccagttaacgatgagaaaccagtgctg
agcaagaaggttgatatagaggtcaacatgggtgaaactcgaataatttctagtgctgtt
ctgtcagcagaagacaaagatacccccagggagaaaatttactacttatttgaaagactt
ccagaaaatggtcagcttcagctcaaggtaggccaaggctggatgacgctccaaactgga
atgaagtgcactcaggaagaactggatatgaaccttgtgagatatgcccatacaggagct
atagggtccaagaagcaagacagcttcacgtttcatctgtgggatgggtacaacagatcc
ccagctgcggaattctacataaatatcaaggacatggaaaagggagacattgctgttttc
ataaaacctcttagagtgtcaaaaggggatcggagctacattacaactgatgtcctcctg
gtgctggatggtactgacaagccagaggagctcctctatgtgataacctccccaccccag
tacggacaaatagagtatgtcagctatcctggcatccccatcaggagcttcagtcaaatg
gatgtagcaagacacatagtctgctatgttcacaacactaaggcagttgtttctgaagat
tccttcagattcattgtcagcaatggactgaggactaagcatgggacattcatgatctcc
ttggaagcagtcgaccaagatttgcccacactgtctaggaacacagggttaagattagtg
gaaggcactacggctttcctttctcctgatgtcctgcaactttcagacccagacacggct
aaagaaaaccttaccttcctcctggctcagctgccccagtatggtcatctctattatcga
ggaaccatgctactgcagtacaatttcacccagcaagatgtggacaacagggatgttgca
tacaagcatggtggtggggattcccaaactgacagatttacatttgttgcaaccgatagg
actaatcaaggcttcatcatgaatgggagggtgcagagcgagccagtggcattcaccatt
caggtggatcatttggacaaaatagcacccaaaattattcatctccattgcttttctgat
gtggaagtgctgaagagtggcaattatgggatttatattactgccaggtccctgaaggca
tctgaccccaatacagaagatgacaaaataatgtttaggattttacgaggtcctcattat
ggctacctggaaaatataacaacaggtggatttattcaggaatggtttagtcaaaaggat
ctaaacagcaaaatcatactttatgtcatcaatccatcgcagaaagtgaattcagacaac
atcgagtttcaagtcacggatgccagggggaactccgcagtgccccaaaggctggagcta
cagtggtctcgcattgaaatgcaacagactgagtacgaggtgtgtgagagcgcaggagtg
gtgtctttgaaaatcgccagggcaggacactcagcgcagtctgcctttatcgcagtgaag
gtcaatgaaatatcagctacgctgggaaaggactttacagtgactccctccaagcttgtc
cagtttgatccaggaatgtcaaccaagacatggaatatagcaattacctatgatggatta
gaggaagatgatgaagtctttgaagtagttctgaactcccctgtgaatgctgttcttggc
acccggacaaaagctgtagtgagaattttggactcaaaaggaggtcagtgcagctattcc
catccttctggccaaaggaagcatgacttctcggggagaggcacactgcttccagtttcc
tcaggcttctcatcaactcccaggcctggcactgctcccttggaagggatcccactgcct
ccttccaaagggatgagggagcatggaggggacctgcggcaggaacacagcttgacgaat
cagtcaagaaccagactgagagtgattggaaatggcagaatagttcatccttcatctgta
tttagaaatggaaccgatgtggttttcaaatatcacgggatggtatcactcaaaatagag
gatgactcctcatcaactaaagcaaataagaaggctcaagtgtcagtaattaaccaagca
caaccacagataaatgttgtctcctctaggaagacagaaatcccacaagctgataaggca
gaactggcatctgaaccaaactcaagacatcaggactttaactcttttccaaaggcctgt
acaccagatttaaagggactgttgcactatgaagaaagcactcaaaagttatttcagtgt
gacgggataatatggcaattctggaatctccaaagcaaggaggtaaccatgaagaaatgt
ccctctggatggagtcaccacgagggcagctgctacctcctggtagtgaatcacaaagtc
acgtggaacactgctgctcgggcttgcagagaacaatacctggggagtctagcaagtgtg
gctaatgagcaacacatgcagtggctgtgggacttcagtgggaggaagcccttttggata
ggcttgaatgaccaagttaatcctggacattgggagtggaacggaggagaacctgtaact
tacataaactggagaaaaggctcataccactttccaaagagaggaagaaattgtgtagtg
gtgcagaagcgaggaaaatggcaagcaactgactgcaggaaggtgaaaaggaacagctat
atgtgttcaagaaagctgtaa
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integrated database retrieval system
