Columba livia (rock pigeon): 102097510
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Entry
102097510 CDS
T02912
Symbol
PCDH9
Name
(RefSeq) LOW QUALITY PROTEIN: protocadherin-9
KO
K16498
protocadherin delta 1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03273
Virion - Lassa virus and SFTS virus
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03273 Virion - Lassa virus and SFTS virus
102097510 (PCDH9)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
clv01009
]
102097510 (PCDH9)
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
clv04515
]
102097510 (PCDH9)
Protein phosphatases and associated proteins [BR:
clv01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
102097510 (PCDH9)
Cell adhesion molecules [BR:
clv04515
]
Cadherins
Protocadherins
102097510 (PCDH9)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Cadherin
Protocadherin
Cadherin_CELSR2_9th
Cadherin_2
RET_CLD1
Big_9
MAP17
V_ATPase_I
RCR
EphA2_TM
DUF6249
7tm_3
DUF6377
Cadherin_4
Motif
Other DBs
NCBI-GeneID:
102097510
NCBI-ProteinID:
XP_021142432
LinkDB
All DBs
Position
Unknown
AA seq
1204 aa
AA seq
DB search
MDLRDFCLLTALIACLRLDSAIAQELIYTIREELPENVPIGNIPKDLNISHINAATGTSA
SLVYRLVSKAGDAPLVKVSSTTGEIFTTSNRIDREKLCAGASYADENECFFELEVVILPN
DFFRLIKIKIIVKDTNDNAPMFPSPVINISIPENTLINSRFPIPSATDPDTGFNSVQHYE
LLNGQSVFGLDIVETPEGEKWPQLIVQQNLDREQKDTYVMKIKVEDGGTPQKSSTAILQV
TVSDVNDNRPVFKESQVEVHIPENAPVGTSVIQLHATDADIGSNAEIRYIFGAQVAPATK
RFFALNNTTGLITVQRSLDREETAIHKVTVLASDGSSTPARATVTINVTDVNDNPPNIDL
RYIISPINGTVYLSEKDPVNTKIALITVSDKDTDVNGKVICFIEREVPFHLKAVYDNQYL
LETSSLLDYEGTKEFSFKIVASDSGKPSLNQTALVRVKLEDENDNPPIFSQPVIELSVAE
NNRRGLYLTTISATDEDSGKNADIVYQLGPNASFFDLDRKTGVLTASRVFDREEQERFIF
TVTARDNGTPPLQSQAAVIVTVLDENDNSPKFTHNHFQFFVSENLPKYSTVGVITVTDAD
AGENKAVTLSILNDNENFVLDPYSGVIKSNVSFDREQQSSYTFDVKAVDGGQPPRSSTAK
VTINVMDVNDNSPVVIYPPSNTSFKLVPLSAIPGSVVAEVFAVDIDTGMNAELKYTIVSG
NNKGLFRIDPVTGNITLEEKPTPNDVGLHRLVVNISDLGYPKSLHTLVLVFLYVNDTAGN
ASYIYDLIRRTMETPLDRNIGDSSQPYQNEDYLTIMIAIVAGAMVVIVVIFVTVLVRCRH
ASRFKAAQRSKQGAEWMSPNQENKQNKKKKRKKRKSPKSSLLNFVTIEESKPDDAVHEPI
NGTISLPAELEEQSIGRFDWGTAPPTTFKPNSPDLAKHYKSASPQSAFHLKPDTPVSVKK
HHVIQELPLDNTXXXXXXXXXXXXXXXXXXXXXXXXXXSQGGFKTKGPLHTRQSQRRVTF
HLPDGSQESCSDSGLGDHEPVGSGTLISHPLPLVQPQDEFYDQASPDKRTEADGNSDPNS
DGPLGPRGLAEATEMCTQECLVLGHSDNCWMPPSLGPYQQPKSPLSTFAPQKEWVKKDKL
VNGHTLTRTWKEDSNRNQFSDRKQYGSSEGHFNTGNHMTDIPLANLKSYKQAQGAVESPK
EHQL
NT seq
3615 nt
NT seq
+upstream
nt +downstream
nt
atggacctgagggatttttgcctgttgaccgctttgattgcctgtttaaggctggattct
gctatagctcaagaacttatttacactattagagaggagctgcctgaaaacgtacccata
gggaacataccaaaggacctgaacatttctcacatcaatgctgccacagggaccagtgcc
agccttgtctacagactggtatctaaagcaggggatgcccctctggtcaaagtgtccagt
accactggggaaatctttacgacatctaaccgaatagacagagaaaaactctgtgctgga
gcttcctatgcagacgaaaatgagtgtttctttgaacttgaagttgtgattctccccaat
gacttttttaggctgatcaaaataaaaatcattgtaaaggacactaatgacaatgcacct
atgtttccatcccctgtcatcaatatctccatcccagaaaatactctgatcaacagtcgc
tttccaatcccatcagcaacagatcctgacacaggtttcaacagcgtgcagcactatgag
ttgttaaatggacagagtgtctttggactggatattgtggaaactccagaaggagagaaa
tggcctcagctgattgtgcaacagaacttggacagagagcaaaaggatacctatgtgatg
aaaatcaaagtggaggatggaggtaccccccagaaatccagcacagccatcctgcaagtc
acagtaagtgatgtcaatgataacaggccagtatttaaagagagtcaagtagaggttcat
ataccagagaatgctcctgtaggcacttctgtaattcagcttcatgcaacagatgctgat
ataggaagcaatgcagaaatcagatatatttttggtgcccaagtcgcccccgcaaccaaa
agattttttgctttaaacaacaccacagggctgattacagttcagaggtcattagatcga
gaagagactgctattcacaaagtgacagtgctggctagtgatggtagctctacaccagct
cgggcaactgtcaccatcaatgtcactgatgtaaatgataaccctcctaacatagacctc
aggtacataataagtcccatcaatggcacagtgtacttatctgagaaagatcctgtcaat
acaaagattgccctaattacagtttcagataaggacactgatgtgaacggcaaagtgatc
tgtttcattgagagagaggttcccttccacttgaaggcggtttacgacaaccagtatttg
ttggagacctcttccttgttggactatgagggcaccaaagaattcagctttaaaattgtt
gcttctgattctggcaagcccagtttgaaccagactgccctggtaagagttaaactggag
gatgaaaatgacaaccctccgattttcagccagcctgtaattgagctgtcagttgctgaa
aacaaccgtcgtggtctatacttaacaactattagtgccacagatgaagacagtgggaaa
aatgcagacattgtttatcagcttggccctaatgcctcctttttcgatctggatcgaaag
acaggagttttgacagcctccagggtttttgacagagaagagcaggaacgtttcattttc
actgttacagcccgagacaatggcacccctcctttgcagagtcaagcagctgtaattgtt
accgtgttggacgaaaatgacaacagtcccaaatttactcataatcacttccagtttttc
gtatcagagaacttaccaaagtacagcacagtgggggtgatcacagtgaccgatgcagat
gctggggaaaataaagcagtgaccctttccatcctgaatgacaatgaaaactttgtgctg
gatccgtactctggagttataaagtccaatgtttcttttgatcgagaacagcagagctcc
tacacctttgatgttaaggcagtggatggagggcaacctcctcgctcttctacagcaaaa
gtaaccataaacgtaatggatgttaatgacaacagccccgttgtcatctacccgccttcc
aatacttcttttaagctggtgccactctcagcaattccaggctcggtggtagccgaagtg
tttgctgtggatatagacactggaatgaatgccgaacttaagtacacaatagtaagtgga
aataacaagggtttgtttcggattgatccagtgacaggtaatatcactctggaagaaaaa
ccgactcctaatgatgtggggcttcatcgcttagttgtcaacataagtgatttgggttat
cccaaatccctgcatactcttgtgcttgtatttttgtatgtaaatgatactgctggaaat
gcctcttatatttatgacttaatacgcaggactatggaaacacctttagaccggaacata
ggggacagcagccaaccctaccaaaacgaggactatctcacaatcatgatcgccattgtg
gcaggtgccatggttgtcatagttgtgatatttgtcacagttctcgttcgctgtcgacac
gcatccagattcaaagccgcccagaggagcaagcaaggtgctgagtggatgtctcccaat
caggagaacaagcaaaacaagaaaaagaaaaggaagaaaaggaaatctccaaagagttct
cttttgaactttgtgaccattgaggagtccaaacctgatgatgcagttcatgaacctatc
aacgggacaataagccttccagcagagctggaggagcagagtataggaagatttgattgg
ggcacagcaccaccaacaacctttaagcctaacagtcctgatcttgccaagcattacaaa
tctgcctctccgcagtctgcttttcatctcaaacctgacactccagtttcagtgaaaaag
caccatgtgattcaggagctcccgttggacaacacctnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnntcccaa
ggaggcttcaagacaaagggccccttacacaccagacagtcccagcgccgtgttacattt
cacctccctgatggctcccaggaaagctgcagtgacagtggtctgggagaccacgagccg
gtgggtagtggaaccctgatctcacaccctctccctctggttcagccgcaggacgaattc
tatgaccaggcttcaccggacaagaggactgaagctgatggcaactctgaccccaactcg
gatgggcctcttgggccacgaggattagctgaagctacggagatgtgtactcaagaatgc
ctggttttgggtcactcagacaactgttggatgcctcccagcttgggcccataccaacag
ccaaagtctcctctctccacctttgcacctcagaaagaatgggttaagaaggacaaacta
gttaacggacacacattgaccaggacctggaaagaagatagcaacagaaaccagttcagt
gaccgaaagcagtatggttccagtgagggccatttcaacactggcaaccacatgactgac
atccctctggccaacttgaagtcttataaacaggcccaaggagctgttgagagtccaaag
gagcaccagctataa
DBGET
integrated database retrieval system
