Columba livia (rock pigeon): 102097543
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Entry
102097543 CDS
T02912
Symbol
PRPF4
Name
(RefSeq) U4/U6 small nuclear ribonucleoprotein Prp4
KO
K12662
U4/U6 small nuclear ribonucleoprotein PRP4
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
102097543 (PRPF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
clv03041
]
102097543 (PRPF4)
Spliceosome [BR:
clv03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6 snRNP specific factors
102097543 (PRPF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_CAF1B_HIR1
WDR55
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR75_1st
ANAPC4_WD40
PRP4
Beta-prop_EML
WD40_MABP1-WDR62_1st
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_SCAP
Beta-prop_TEP1_C
Beta-prop_EIPR1
Beta-prop_DCAF4
Beta-prop_RIG_2nd
Beta-prop_Vps41
Beta-prop_IFT122_1st
WD_LRWD1
Beta-prop_IFT140_1st
WD40_like
WD40_RFWD3
Beta-prop_WDR35_TULP_N
Beta-prop_WDR19_1st
Motif
Other DBs
NCBI-GeneID:
102097543
NCBI-ProteinID:
XP_021155920
LinkDB
All DBs
Position
Unknown
AA seq
557 aa
AA seq
DB search
MVEWILLKAALRPMGDREVIWDRQHGFTKGKSCLTNLVAFSFTFQATKSKPAEESDAPPA
KRAPIFYGSLEEKEKERLAKGESGLLGKEGMKAAMEAGNINISSGEVFDLEDHMSERQAE
VLAEFERRKRARQINVSTDDSEVKACLRALGEPITLFGEGPAERRERLRNILSVVGTDAL
KKTRKDDDRSKKSKEEYQQTWYHEGPRSLKTARLWLANYSLPRAAKRLEEARLLKEIPEA
TRTSQRQELHKSLRSLNNFCSQIGDDRPLSYCHFSPNSKLLATACWSGLCKLWSVPDCNL
VHTLRGHSTNVGAIVFHPKSTVSVDKKDVNLASCAADGSVKLWSLESDEPVADIEGHSMR
VARVMWHPSGRFLGTTCYDHSWRLWDLEAQEEILHQEGHSKGVYDIAFHTDGSLAGTGGL
DAFGRVWDLRTGRCIMFLEGHLKEIYGINFSPNGYHVATGSGDNTCKVWDLRQRKCIYTI
PAHQNLVTGVKFEPNHGNFLLTGAYDNTAKIWTHPGWSPLKTLAGHEGKVMGLDISLDGQ
LIATCSYDRTFKLWTAE
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atggtggaatggatcctgctaaaagctgcgctgaggcccatgggggacagggaggtgatt
tgggacaggcagcacggcttcaccaagggcaagtcctgcctgaccaaccttgtggccttc
tcctttaccttccaggccacgaagagcaagcctgcagaagagagcgatgcgccccccgcc
aagagagcccccatcttctacggcagcttggaagagaaggagaaggagcgtctggcaaag
ggagagtcggggctgctgggcaaagaagggatgaaggctgccatggaggctgggaacatc
aacatcagcagcggcgaggtgtttgacctcgaggaccacatgagcgagcggcaggcggag
gtgctggccgagttcgagcgcaggaagagagcgcggcagatcaacgtctccaccgacgac
tcggaagtcaaagcgtgtctgcgagctctgggggagcccatcacactctttggggaaggg
cccgcagagaggagggagagattgagaaacatcctttccgtggttggcacagatgcatta
aaaaagaccaggaaagatgacgacaggtctaaaaaatccaaagaggagtatcagcaaacc
tggtaccacgaggggccgcgcagcctgaaaacagcaaggctgtggcttgctaactactcg
ctgcccagggcagcaaagcggctggaagaagcccggctgctcaaagagattccagaggcg
accaggacatcgcagagacaggagctacacaaatccctgcggtccttgaataacttctgc
agtcagattggagacgatcgcccgctgtcctactgccacttcagccccaactccaaactc
ctcgctaccgcctgctggagcggattgtgcaagctctggtctgtgcctgactgcaacctg
gttcacaccttacgaggacatagcaccaacgttggagcaatcgttttccatcccaaatcc
accgtctccgtggacaagaaggatgttaacctggcgtcgtgtgcggctgacggctccgtc
aaactctggagcctggaaagtgatgaaccggtggcagatattgaaggacacagcatgaga
gtggcccgtgtgatgtggcacccgtcggggaggttcctgggtaccacctgctacgatcac
tcatggcgcttgtgggacttggaagctcaggaggagattctccatcaggaggggcacagc
aaaggggtgtatgacatcgccttccacacggacgggtccctcgcggggacggggggtctg
gatgcgtttggccgggtgtgggacctgcgcacaggacgctgtatcatgtttctagaaggc
cacctgaaggagatttacgggattaacttctcccccaatgggtaccacgttgcaaccggc
agcggtgacaatacctgcaaggtctgggacctccgccaaaggaagtgcatctacaccatt
cctgcccaccagaacctggtgaccggcgtaaaatttgaacccaatcacgggaacttcctg
ctcacgggcgcgtacgacaacacggccaagatctggactcaccccggctggtccccgctg
aagacgctggcggggcacgaggggaaggtgatgggactggacatctccctggacgggcag
ctcatcgccacctgctcctacgacagaaccttcaagctgtggacagccgagtag
DBGET
integrated database retrieval system
