Columba livia (rock pigeon): 102097632
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Entry
102097632 CDS
T02912
Name
(RefSeq) sodium- and chloride-dependent GABA transporter 1
KO
K05034
solute carrier family 6 (neurotransmitter transporter, GABA) member 1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04082 Neuroactive ligand signaling
102097632
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
clv02000
]
102097632
Transporters [BR:
clv02000
]
Solute carrier family (SLC)
SLC6: Sodium- and chloride-dependent neurotransmitter transporter
102097632
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Motif
Pfam:
SNF
Motif
Other DBs
NCBI-GeneID:
102097632
NCBI-ProteinID:
XP_013227419
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Position
Unknown
AA seq
600 aa
AA seq
DB search
MGKMDNTSVELSSPSEVKQAALEETETIAPEAVSTKKKKKEIPDRGSWKGRFDFLLSCVG
YAIGLGNVWRFPYLCGKNGGGAFLIPYFLTLVFAGIPLFLLETALGQYTSVGGLGVWKLA
PMFKGVGLAAVVLSFWLNIYYIVIIAWALYYLFNSFTADLPWQSCGNAWNTDRCFSNYSL
DDTTNLTSAVTEFWERNMHQMSGGLGEPGTVRWPLAGTLALAWLLVYFSIWKGVEWTGKV
VYFSATYPYFMLFILFFRGVTLPGAKEGILFYLTPDFRRLSDSEVWMDAATQIFFSYGLG
LGSLIALGSYNTFHNNVYRDSIIVCCINSTTSIFAGFVIFSIVGFMSHITKKSISELASS
GPGLAFLAYPQVVTQLPLSPLWSILFFSMLMMLGLDSQFCTVEGFITALMDEYPHLLRAR
KKVFIAVVCFISYLIGFSNITQGGIYVFKLFDYYSASGMCLLFLVFFETISISWCYGVNR
FYRNIEEMIGYKPCIWWKICWAFFTPLVCLGVFFFSVVEMTPLTLGKYVYPAWGQGIGWL
MALSSMVLIPGYMLYCFFTSTGTLRQLKKQMTQPKPEVHTQNNGLQPKTSLNGRVSDAAV
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgggtaagatggacaacacctccgtggagctgagctccccctccgaggtgaagcaggca
gccttggaggagacagagaccatcgccccagaggctgtgagcacgaagaagaagaagaag
gagatcccagacagaggctcctggaaaggcagatttgacttcttgctgtcctgcgtgggc
tatgctattgggctgggcaacgtctggcgcttcccgtatctttgtggcaagaacggagga
ggggccttcctcattccctatttcttgacactggtgtttgctgggattcctctcttcctg
ctggaaactgccctgggccagtatacctctgtcggtggactgggagtctggaaattagca
cccatgtttaaaggagtggggctggcagctgtggttctttccttctggctgaacatctac
tacattgtcatcatcgcctgggctctctactatctcttcaactccttcaccgcggacttg
ccatggcagagctgtgggaacgcctggaacaccgaccgctgcttctccaactactccctg
gatgacaccaccaacctcaccagtgccgtcaccgagttctgggagaggaacatgcaccag
atgtccgggggcctgggagagcctggcaccgtccgctggcccctggctggcacactggcc
ctggcctggttactggtctacttctccatctggaagggtgtggagtggacaggcaaggtg
gtgtatttctcggccacttacccctacttcatgctgttcatcctcttcttccggggagtc
acgctgccaggagccaaggaggggatcctcttctacctcacgcccgacttcagaaggctc
tctgactccgaggtctggatggacgcagccacacagatcttcttctcttacggcctgggg
ctggggtccttgattgctctggggagctacaacactttccacaacaatgtctacagagac
tccattattgtctgctgtataaactccaccacaagcatatttgccggatttgtcattttc
tctattgttggcttcatgtcgcacatcacgaagaagtctatctcggagcttgcctcctca
ggccctggactggctttcctcgcctacccacaggttgtcacccagctgcccttgtcccca
ctctggtcaatcctcttcttctccatgctgatgatgttgggtctggatagtcagttctgc
accgtggaagggtttattacagccctgatggatgagtatcctcatctcctgagagccagg
aagaaggtcttcatcgcggtagtctgcttcatctcttatctcattggattctccaacatc
acccagggtggcatttatgtcttcaagctgtttgattactactcagccagtggcatgtgc
cttctctttctcgtcttctttgagaccatctccatttcttggtgttatggtgtgaacagg
ttttacaggaacattgaagaaatgattggctacaaaccttgcatctggtggaagatctgc
tgggctttcttcactcctcttgtctgcctgggcgtgttctttttcagcgtggtggaaatg
acgcctctgacactgggaaaatacgtctatcctgcgtggggacaaggcattggttggctt
atggctctgtcctccatggttctgattccgggatacatgctatactgtttcttcacctca
acggggaccctccggcagctgaaaaagcagatgacacagcccaagccagaggtgcacact
cagaacaatggcctccagccgaagacatccttgaacgggagggtttcagatgctgctgtg
tag
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