Columba livia (rock pigeon): 102098052
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Entry
102098052 CDS
T02912
Symbol
SMURF1
Name
(RefSeq) E3 ubiquitin-protein ligase SMURF1
KO
K04678
E3 ubiquitin ligase SMURF1/2 [EC:
2.3.2.26
]
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04120
Ubiquitin mediated proteolysis
clv04137
Mitophagy - animal
clv04144
Endocytosis
clv04340
Hedgehog signaling pathway
clv04350
TGF-beta signaling pathway
clv04520
Adherens junction
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
102098052 (SMURF1)
09130 Environmental Information Processing
09132 Signal transduction
04340 Hedgehog signaling pathway
102098052 (SMURF1)
04350 TGF-beta signaling pathway
102098052 (SMURF1)
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102098052 (SMURF1)
04137 Mitophagy - animal
102098052 (SMURF1)
09144 Cellular community - eukaryotes
04520 Adherens junction
102098052 (SMURF1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102098052 (SMURF1)
04121 Ubiquitin system [BR:
clv04121
]
102098052 (SMURF1)
03029 Mitochondrial biogenesis [BR:
clv03029
]
102098052 (SMURF1)
Enzymes [BR:
clv01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
102098052 (SMURF1)
Membrane trafficking [BR:
clv04131
]
Endocytosis
Clathrin-mediated endocytosis
Ubiquitin E3 ligases
102098052 (SMURF1)
Autophagy
Mitophagy
Other mitophagy associated proteins
102098052 (SMURF1)
Ubiquitin system [BR:
clv04121
]
Ubiquitin ligases (E3)
HECT type E3
102098052 (SMURF1)
Mitochondrial biogenesis [BR:
clv03029
]
Mitochondrial quality control factors
Mitophagy factors
Parkin-independent mechanism factors
102098052 (SMURF1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
HECT
WW
C2
DUF7350
Motif
Other DBs
NCBI-GeneID:
102098052
NCBI-ProteinID:
XP_021146022
LinkDB
All DBs
Position
Unknown
AA seq
716 aa
AA seq
DB search
KIRLTVLCAKNLAKKDFFRLPDPFAKIVVDGSGQCHSTDTVKNTLDPKWNQHYDLYVGKT
DSITISVWNHKKIHKKQGAGFLGCVRLLSNAISRLKDTGYQRLDLCKLNPTDTDAVRGQI
VVSLQTRDRIGTGGSVVDCRGLLENEGTVYEDSGPGRPLSCFMEEPAPYTDTTGAAGGGN
CRFVESPGQDQRLQAQRLRTPEVRGHVQTPQNRPHGHQSPDLPEGYEQRTTVQGQVYFLH
TQTGVSTWHDPRIPRDLNSVNCDELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLH
HIMNHQCQLKEPSQQALPAPNEGSLEDGEELPAQRYERDLVQKLKVLRHELSLQQPQAGH
CRIEVSREEIFEESYRQIMKMRPKDLKKRLMVKFRGEEGLDYGGVAREWLYLLCHEMLNP
YYGLFQYSTDNIYMLQINPDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQL
LGKPIQLSDLESVDPELHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNIP
VTEENKKEYVRLYVNWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKI
DLNDWKSNTRLKHCMADSNIVKWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGA
AGPRLFTIHLIDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE
NT seq
2151 nt
NT seq
+upstream
nt +downstream
nt
aagatccgcctcacagtgttatgtgccaagaatctcgcaaagaaggacttcttcagactt
cccgacccgtttgcaaaaatagttgttgatgggtcgggtcagtgccattcaactgacact
gtgaagaacacgttggaccccaagtggaaccagcattacgacctatatgtggggaagaca
gattctataaccatcagcgtatggaaccataaaaaaatccacaagaagcagggagctggc
ttcctggggtgcgtgcggctcctctccaacgccatcagcaggctaaaagataccggatac
caacgtttggatctatgcaaactaaaccccacggataccgatgccgtacgaggccaaata
gtggtcagtttacagacgcgggacagaataggcacaggaggttccgtagtagactgtaga
gggcttttggagaatgaaggaacggtttatgaagattccgggccggggaggccgctgagc
tgctttatggaggaaccagcaccatacacagacactacgggcgctgctgggggaggcaac
tgtcgcttcgtcgagtcccccgggcaggatcagcggctccaggcacagcgactgcggacg
cctgaagtccgaggtcacgtacagacacctcagaacaggccccacggtcaccagtcgcct
gacctaccagaaggctacgaacaaagaacaacggtacagggacaggtttattttttgcac
acgcagactggagtcagcacgtggcatgacccgaggataccaagagaccttaacagtgtg
aattgtgatgaactgggacctttgcctccaggttgggaagttcgaagtacagtttcggga
aggatatattttgtagatcacaacaacagaaccacacaattcacagatccacggctacat
cacatcatgaaccatcaatgccagctgaaagagcccagccagcaggctctgccagctccg
aacgagggctcgctggaagacggcgaggagttgcctgcacaaagatatgaaagagacctg
gtacaaaagttgaaagttcttcgacatgagctctctcttcagcaaccacaagctggtcac
tgtcgcatcgaagtatccagagaggaaatatttgaggaatcctaccgtcagataatgaag
atgaggccaaaggacttgaaaaagaggcttatggtgaaatttcgaggagaggaaggcctg
gattatggaggagtagcaagagaatggttgtacttgctgtgccatgaaatgttaaatccc
tattacggactcttccagtactccacagataatatttacatgctgcaaatcaacccagac
tcttctatcaatcctgaccatttgtcttatttccattttgttggtcggataatgggtttg
gctgtgttccatggacactatatcaacgggggtttcacggttcccttttacaaacagctt
ctggggaaacccattcagctctccgatctggaatctgttgacccagaattacacaaaagt
ttagtctggattttagagaacgatatcaccccggttctggaccatacattctgtgtggaa
cacaatgcttttgggcggattttacagcatgaactcaaaccaaacggcaggaatatccca
gtgacagaagagaacaagaaagaatatgtcaggttgtatgtaaactggcgatttatgaga
ggaatagaggcgcagttcctggctctgcagaaaggttttaatgaacttattcctcaacat
ctccttaagcctttcgaccagaaagaacttgagctgatcatcggaggcctggataagata
gacctgaacgactggaagtcgaacacgcgtctaaagcactgcatggcagacagcaatatt
gtcaagtggttctggcaagcggtggaaacgtttgacgaagaaagaagggcaaggctgctg
cagtttgtgacgggctcgacgcgtgtcccacttcaaggtttcaaggctttacaaggcgct
gcaggacccagactgtttaccatccatttaatagatgcaaacacagacaaccttccaaaa
gcccacacttgctttaaccggattgacattccgccttatgagtcgtacgagaagctttat
gagaagctgctgacagctgtggaagagacatgtgggtttgctgtggagtga
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integrated database retrieval system
