Columba livia (rock pigeon): 102098434
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Entry
102098434 CDS
T02912
Symbol
GRIN1
Name
(RefSeq) glutamate receptor ionotropic, NMDA 1
KO
K05208
glutamate receptor ionotropic, NMDA 1
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04020
Calcium signaling pathway
clv04080
Neuroactive ligand-receptor interaction
clv04082
Neuroactive ligand signaling
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09130 Environmental Information Processing
09132 Signal transduction
04020 Calcium signaling pathway
102098434 (GRIN1)
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
102098434 (GRIN1)
04082 Neuroactive ligand signaling
102098434 (GRIN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
clv04040
]
102098434 (GRIN1)
Ion channels [BR:
clv04040
]
Ligand-gated channels
Glutamate (ionotropic)
102098434 (GRIN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Lig_chan
ANF_receptor
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Ion_trans_2
DUF6724
Rap-GAP_dimer
Motif
Other DBs
NCBI-GeneID:
102098434
NCBI-ProteinID:
XP_013225635
LinkDB
All DBs
Position
Unknown
AA seq
965 aa
AA seq
DB search
MSTMRLLLLALLFSSSFARAGCDPKIVNIGAVLSTKKHEQIFREAVNQANKRHGTWKLQL
NATSVTHKPNAIQMALSVCEDLISSQVYAILVSHPPAPNDHLTPTPVSYTAGFYRIPVIG
LTTRMSIYSDKSIHLSFLRTVPPYSHQANVWFEMMRVFNWNHVILIVSDDHEGRAAQKKL
ETLLEEKESKAEKVLQFDPGTKNVTSLLLEAKELEARVIILSASEDDAATVYRSAAMLNM
TGSGYVWLVGEREISGNALRYAPDGVIGLQLINGKNESAHISDAVAVVAQAVHDLFEKEN
ITDPPRGCVGNTNIWKTGPLFKRVLMSSKYSEGVTGRVEFNEDGDRKFANYSIMNLQNRK
LVQVGIYNGSHVLTNDRKIIWPGGETEKPQGYQMSTKLKIVTIHQEPFVYVKPTQADGTC
REEFTINGDPVKKVFCTGPNETIPGRPTVALCCYGFCIDLLIRLAGVMNFTYEVHLVADG
KFGTQERVNNSNKKEWNGMMGELLSGQADMIVAPLTINNERAQYIEFSKPFKYQGLTILV
KKEIPRSTLDSFMQPFQSTLWLLVGLSVHVVAVMLYLLDRFSPFGRFKVNSEEEEEDALT
LSSAMWFSWGVLLNSGIGEGAPRSFSARILGMVWAGFAMIIVASYTANLAAFLVLDRPEE
RITGINDPRLRNPSDKFIYATVKQSSVDIYFRRQVELSTMYRHMEKHNYESAAEAIQAVR
DNKLHAFIWDSAVLEFEASQKCDLVTTGELFFRSGFGIGMRKDSPWKQNVSLAILKSHEN
GFMEDLDKTWVRYQECDSRSNAPATLTFENMAGVFMLVAGGIVAGIFLIFIEIAYKRHKD
ARRKQMQLAFAAVNVWRKNLQDRKSGRAEPDPKKKATFRSITSTLASSFKRRRSSKDTPC
RMVPQECQRDRLAPWSQDSPGKLPPHSERPSAHHHPSCTASPRHIIPTAPGGDACVPHRQ
LLQLE
NT seq
2898 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccatgcggctgctgctgctcgccctgctcttctcctcctctttcgcccgagcc
ggctgcgaccccaagatcgtcaacatcggcgcggtgctgagcaccaagaagcacgagcag
atcttccgcgaggcggtgaaccaggctaacaagcggcacggcacctggaagctccagctc
aacgccacctcggtcacgcacaagcccaacgccatccagatggccctctccgtctgcgag
gacctcatctccagccaggtctatgcaatattagttagtcaccctcctgctcccaacgat
cacctaacaccaacacccgtatcatacacagctggcttctacaggattcctgtcattggt
ctgacaacacgcatgtctatatattctgataagagcatccacctgtcctttttgcgcacg
gtgccaccatactctcaccaggccaacgtctggtttgagatgatgagagtcttcaactgg
aatcacgtcattctgatagtcagtgacgaccatgaaggtcgtgctgcacaaaagaagctg
gagaccctcctggaggagaaagagtccaaggctgagaaagtgcttcagtttgaccctgga
accaaaaatgtgacgtcgctgctgctggaggccaaggagctggaggctcgtgtcatcatc
ctttcggccagtgaggatgatgcagccacggtgtacagatcagcggccatgctcaatatg
acgggctccggctacgtgtggctggtgggggaacgggagatatcgggcaatgccctgcgt
tatgcccctgatggagtgatcggtttgcagctcatcaatgggaagaatgagtcagcccac
atcagtgacgctgtcgcggtggtggcccaggccgtgcacgacttgtttgagaaggagaat
ataacagacccaccacggggctgcgtgggcaacaccaacatctggaagacaggacccctt
ttcaagagggtgctgatgtcctccaagtactcagagggtgtcactggacgggtggagttc
aatgaggacggggacaggaagtttgccaactacagcatcatgaacctgcagaatcggaaa
ctggtccaggttgggatttacaacggcagccatgtcttgaccaatgaccggaagattatc
tggccagggggagaaactgagaaacctcaaggctatcagatgtcgactaagttgaagatc
gtgaccatccaccaagagccctttgtgtatgtgaagcccacacaagcagatgggacatgc
agggaggaattcaccatcaatggagaccctgtgaaaaaagtcttttgcactggacccaac
gagaccatcccaggccgccccaccgtggcactatgctgctacggcttctgcatcgacctg
ctcatccggctggcgggggtgatgaacttcacctacgaggttcacctggtggctgacggt
aaatttggtacccaagagcgggttaacaacagcaacaagaaggagtggaacgggatgatg
ggagagttgctgagtggccaagcggacatgattgtggctcctctcaccatcaacaatgag
cgggcacagtacattgagttctccaagcccttcaagtaccagggtctcaccatccttgtg
aagaaggaaatcccccgcagcaccctggactcattcatgcagcctttccagagcacgctg
tggctgctggtggggctgtctgtgcacgtggtggcagtgatgttgtacctcttagaccga
ttcagcccgtttggccggttcaaagtgaacagcgaggaggaggaggaagatgccctgacc
ctctcctcagccatgtggttctcctggggagtgctgctgaactccggcatcggagaaggt
gctccccggagtttctctgctcgtattcttggcatggtgtgggctggctttgctatgatc
attgtggcttcatacactgccaacctggcagccttcctggtgttagaccggcctgaggag
agaattacgggcatcaacgacccccggctgcgcaacccctctgataagttcatctatgcc
acggtgaagcagagctcggtggacatctacttccgacggcaggtggagctgagcaccatg
taccggcacatggagaagcacaactacgagagcgcagcggaagccatccaggcagtgagg
gacaacaagctccacgctttcatctgggactcagcggtgctggagttcgaggcctctcag
aagtgtgacctggtgacaacaggggagcttttcttccgctccggctttgggatcgggatg
cgcaaggacagcccgtggaagcagaacgtctccctggccatcctcaagtcccacgagaac
ggcttcatggaggatttggacaagacttgggtgaggtatcaggagtgtgattcccgtagc
aatgccccagcaacactcacctttgaaaatatggcaggtgtgtttatgctggtggctgga
ggtattgttgccgggatatttttaatattcatagaaatagcttacaaaaggcataaggac
gcgcggaggaagcagatgcagctggcgtttgcagccgttaatgtgtggaggaaaaacctg
caggatagaaaaagtggtagagcagaacctgaccctaaaaagaaagccacttttaggtcc
atcacctccaccctggcctccagcttcaagagacgtaggtcctccaaggatacgccctgc
agaatggtccctcaggagtgccagagagacaggctggcaccatggagccaagacagccct
gggaagctaccaccccactctgaacgtcctagcgcccaccatcacccgagctgcacagcc
tctccgcggcacatcatccccaccgccccaggaggagatgcatgtgttccccataggcag
ctcctgcaactcgaatag
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integrated database retrieval system
