Columba livia (rock pigeon): 102098497
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Entry
102098497 CDS
T02912
Symbol
COL8A1
Name
(RefSeq) LOW QUALITY PROTEIN: collagen alpha-1(VIII) chain
KO
K23455
collagen type VIII alpha
Organism
clv
Columba livia (rock pigeon)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C1q
BclA_C
Motif
Other DBs
NCBI-GeneID:
102098497
NCBI-ProteinID:
XP_021155400
LinkDB
All DBs
Position
Unknown
AA seq
728 aa
AA seq
DB search
MAMLFFPVQLLAVTVTIYLELVRSAQGGVYYGIKQLPPQVPQYQPLGQQVPHIPLGKEGI
PMQHMGKEVPHMQYGKEYPHLPQYMKEVPQMPLLGKDMAPKKEKEMPVRSLRGEQGPPGE
PGPRGPPGPPGLPGHGVPGAKGKPGPQGYPGXXXXXXXXXXXXXXXXXMGPPGPRGEMGP
KGEIGPMGIPGPQGPPGPHGLPGIGKAGAPGLQGQPGPKGEPGMKGPPGPPGIPGPKGDK
GVGIPGLPGLKGPPGLPGPPGPVGLPGVGKPGMVGFPGPQGPLGKPGPPGELGLQGPPGP
PGIQGPPGPPGIGKPGQDGVPGQPGFPGGKGEQGLPGLPGPPGLPGVGKPGFPGPKGERG
VGGPPGPLGPKGEKGHAGPPGMGGPGGEPGQPGLPGIMGPPGAAXEAGAVGPPGPVGPKG
EPGLQGFPGKPGFPGEVGAPGLRGLPGPTGPKGEAGHKGLPGLPGVPGLVGPKGEPGLPG
AQGLQGPSGIPGIAGPSGPIGPPGLPGAKGEPGLPGPPGFPGVGKPGVAGXAXXXXXXXX
XXXXXXXXXXXXXPVIIPPTPPAVGQYLPEVAPGIEGLKPPYGYKKGKAGAAVYEMPAFT
AELLTPFPRVGVPVKFDKLLYNGRXXXXXXNPQTGIFTCEIPGVYYFAYHVHCKGASVWV
ALFKNNEPLMYTYDEYKKGFLDQASGSAVVQLMHGDKVYVQMPSEQAAGLYAGQYVHSSF
SGYLLYPM
NT seq
2187 nt
NT seq
+upstream
nt +downstream
nt
atggccatgctgttcttccctgtgcagctgctggcagtgactgtcaccatttacctagag
ctggtgaggtctgctcaaggtggcgtctactatgggatcaagcagctgccaccccaggtg
ccccagtaccagcccctcggacaacaagtacctcacataccactgggcaaggaaggcatc
ccaatgcagcacatgggcaaggaggttccccacatgcagtatggcaaagagtacccccat
ctgcctcagtacatgaaggaggtcccgcagatgcctctgcttggcaaggacatggctccc
aagaaagagaaagaaatgcccgtgcgcagtcttaggggtgagcaaggtccccccggtgag
cctggaccaagagggccaccagggccacccggattaccaggtcacggtgtgccaggagcc
aaagggaaacccggcccgcaaggatatccaggaannnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnntcatggggcccccggggccaagaggcgagatggggcca
aagggggagatcgggcccatggggatacccggaccacaaggtccaccagggcctcatggg
cttcctggcataggaaaagcgggtgctccggggctgcagggacagccggggccgaagggc
gaacccgggatgaaggggccccctggaccccccgggatcccagggccaaaaggggataag
ggtgtcgggatcccaggtttgccagggctgaagggtccgcctggactgcccggtccccct
ggccccgtggggctgccaggggttggcaagccaggcatggttggcttccctggcccgcag
ggacccctgggcaaacccggacccccaggagagctgggactgcaggggcccccgggtcct
cctgggatccaaggacctcccggcccccccggcatcggcaaacccggccaggatggcgta
cctggccagccaggcttcccgggcggcaaaggggagcagggcctgccaggcttgccaggg
ccccccggcctccctggggttgggaagccgggcttccccgggcccaaaggtgagcgtgga
gtgggtggtccgccgggacctctgggaccgaagggggagaaggggcacgcagggccgcca
ggcatgggggggccggggggggagccaggtcagccgggactgccgggcatcatgggcccc
ccaggggctgctngagaggctggggctgtggggccaccggggcccgtcggccccaaaggt
gaacctggcctgcaggggtttccagggaagccaggctttcctggggaagtgggggccccc
gggctgcgggggctgccaggccccacagggcccaaaggggaagccgggcacaagggcttg
ccggggctgccaggcgtcccagggctcgtggggccaaagggtgagccagggctccccggc
gcccaggggcttcagggcccctcgggcatcccaggcatcgcaggacccagtggtcccatc
ggccccccgggcctgccgggggcgaagggggagcctggcctgcctggaccccccggcttc
cccggcgtgggcaaacccggcgttgcggggnctgcnnnnnnnnnnnnnnnnnnnnnnnnn
nnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnnncccagtcatcatcccacccact
ccgcctgccgtgggacagtacctgcctgaggtcgcgccagggatcgagggcctcaagccc
ccgtacggctacaagaaaggcaaggctggcgccgctgtctacgagatgcccgcattcaca
gcagagctcctcacccccttcccccgggtcggggtgcctgtgaagtttgacaagctcctc
tacaatggccggcnnnnnnnnnnnnnnnnnaacccccagacggggatcttcacctgcgag
atccccggcgtctactacttcgcctaccacgtccactgcaaaggggccagcgtctgggtg
gcgttgttcaagaacaacgagccgctgatgtacacctacgatgagtacaagaagggcttc
ctggaccaggcttcgggcagcgccgttgtccagctgatgcacggagacaaggtttacgtc
caaatgccatctgagcaggcggcaggactctatgccgggcagtacgttcattcgtctttt
tcaggatatttattgtatcccatgtaa
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