Columba livia (rock pigeon): 102098537
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Entry
102098537 CDS
T02912
Symbol
TAF1B
Name
(RefSeq) TATA box-binding protein-associated factor RNA polymerase I subunit B isoform X1
KO
K15213
TATA box-binding protein-associated factor RNA polymerase I subunit B
Organism
clv
Columba livia (rock pigeon)
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clv03021
]
102098537 (TAF1B)
Transcription machinery [BR:
clv03021
]
Eukaryotic type
RNA polymerase I system
Basal transcription factors
SL1/TIF-1B
102098537 (TAF1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rrn7_cyclin_C
Rrn7_cyclin_N
Zn_ribbon_RRN7
Motif
Other DBs
NCBI-GeneID:
102098537
NCBI-ProteinID:
XP_021149194
LinkDB
All DBs
Position
Unknown
AA seq
602 aa
AA seq
DB search
MRSPPSLLFSRLNRPSSLNEVRHVPLEREFNERCAQCSEVNWGLTDGGRFYCRSCHNVTE
RTREVINTDFISNTRVQTISKGSRKKEKTDGGCEWYVCEGFQLVLKKQAEALEALGVCPQ
MKDEILCNFWRLYLQKSKQAYCDRPDGETVKALAQVCGSSTDVESEPETPSLLHLLSLSE
SEGDLQTDSSFVSSTSKVSASTSVCSGSVDGSLYFMKNQKEKLRMTMPMTLSFCYMALLW
LREPMTLSDLLRFVVEGHIPYLNVFQHFPEKMKLYGVDLKIFCVESWPVYEEVYDKMLEL
AAFLDLPRFPDITDSCFLHPDMLCMKYLMEANLPDELHNWTCRVVKKICIGEVDFLTLVP
GNKSTRKVKYDVLAAALIIVVLKLLFLLDDHYEWLLSDFAEERNKNNKEGHPYFEFKKWY
KVIKCSLDAEQKKLDEERAKYQWRCEKPLFYSADKKSKVLKRRQMVVNLQNQFGKLSGSV
RPAEKPNPSSFQLSWSEENTDGSCFHGHSLKGILQEKRGVLAAMNPDYWLCTVQLCRERA
CGHLAHYREVEFPQSYHFVLRLFSFLLRIQPSSIHDDVCLIEHKLFNKKLCKKPKYNTVI
RK
NT seq
1809 nt
NT seq
+upstream
nt +downstream
nt
atgagatcccctcccagccttcttttctccaggctgaacagacccagctctctcaatgaa
gttcgccatgtccccttagagagagaatttaatgaacgctgtgctcagtgttcggaagtg
aactggggtctcactgatggaggcagattttattgcagatcttgccacaatgttactgag
agaactagagaagtcataaacactgattttatttctaatacaagagtccagacaatctca
aaaggttcaagaaagaaggaaaaaactgatggaggctgtgaatggtatgtttgtgaaggc
tttcagcttgtactcaagaaacaagctgaagctttggaagcattaggagtatgtccacaa
atgaaggatgaaattctgtgcaatttttggaggctttaccttcagaagagcaaacaggca
tattgcgacagaccagatggggaaactgtcaaagcattagctcaggtgtgcggtagcagt
actgatgtggagagtgaaccagagacgcccagcctccttcacttgttgtctctctctgaa
agcgagggggatctacagaccgattccagcttcgtctcatcgactagcaaggtctcagcg
agcacctctgtgtgctctggatcggtagatggtagcttgtatttcatgaagaaccaaaag
gagaagctgaggatgacaatgccaatgaccctttcgttttgttacatggcgttactctgg
ttgagagaaccaatgacattatctgatctcttaaggtttgttgttgaaggtcatattccg
tatttgaatgtttttcagcattttccggagaagatgaaattatatggagttgatcttaag
atcttttgtgtagagtcgtggcccgtatatgaagaagtatacgacaaaatgcttgagctt
gcagcatttttagacctgcctcgttttccagatataacagatagctgctttcttcatcca
gacatgctgtgcatgaagtacttgatggaagctaatttacctgatgaattgcataattgg
acttgtcgagtggtgaaaaagatctgtattggagaagtggatttcctgactcttgtgcct
ggaaataagtcaacaagaaaagtgaaatatgatgttcttgctgctgcacttattatagtt
gtgctcaaattattgtttttattagatgatcactatgaatggttactttcagactttgct
gaagaaagaaataaaaataacaaagaaggtcatccatattttgagttcaaaaagtggtac
aaggttataaaatgttcattggatgcagagcaaaagaaattggatgaagaaagagccaag
tatcagtggagatgtgaaaaaccactgttttattcagccgacaagaaatctaaagttctt
aagagaagacaaatggttgtgaacttacaaaatcagtttggcaagctgtctggttcagtg
cgacctgctgaaaagccaaatccttcaagttttcagttaagttggtctgaagaaaacaca
gacgggagctgttttcacgggcacagcctgaagggaattttgcaagaaaaacgtggtgta
cttgcagccatgaaccctgactattggctgtgtacagttcaactatgtcgtgagagggca
tgtggtcatctggctcattacagagaagtggaatttccccagagttaccattttgtacta
aggttattctcttttcttctgaggatacagccctcttcaatccatgatgatgtgtgtctg
atagaacacaagctttttaataaaaaactctgtaaaaagccaaaatacaacacagtcata
aggaagtaa
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