Columba livia (rock pigeon): 102098747
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Entry
102098747 CDS
T02912
Symbol
CLTCL1
Name
(RefSeq) LOW QUALITY PROTEIN: clathrin heavy chain 2
KO
K04646
clathrin heavy chain
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04142
Lysosome
clv04144
Endocytosis
clv05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
102098747 (CLTCL1)
04142 Lysosome
102098747 (CLTCL1)
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
102098747 (CLTCL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102098747 (CLTCL1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
clv04147
]
102098747 (CLTCL1)
Membrane trafficking [BR:
clv04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
102098747 (CLTCL1)
Exosome [BR:
clv04147
]
Exosomal proteins
Proteins found in most exosomes
102098747 (CLTCL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
TPR_COPA_B
TPR_Vps41
capSnatchArena
Gp18_dom_I
Motif
Other DBs
NCBI-GeneID:
102098747
NCBI-ProteinID:
XP_021138585
LinkDB
All DBs
Position
Unknown
AA seq
1646 aa
AA seq
DB search
MESDKFICIREKVGEQAQVVIIDMSDPTTPIRRPISAESAIMNPASKVIALKAGKTLQIF
NIEMKSKMKAHTMAEEVIFWKWISVNTVALVTETAVYHWSMEGESQPQKMFDRHASLAGC
QIINYRTDEHQKWLLLIGISAQQNRVVGAMQLYSVDRKVSQPIEGHAAAFAEFKIEGNAK
PSTLFCFAVRSPAGGKLHIIEVGQPATGNQPFVKKAVDVFFPPEAQTDFPVAMQIGVKHG
VIYLITKYGYIHMYDLESGVCIYMNRISADTIFVTAPHEPTSGIIGVNKKGQVLSVCVEE
DNIVNYATNVLQNPDLGLRMAIRSNLAGAEELFARKFNTLFAQGSYADAAKVAASAPKGI
LRTSDTIRKFQSVPAQPGQASPLLQYFGILLDQGQLNKFESLELCRPVLQQGRKQLLEKW
LKEDKLECSEELGDLVKTADPTLALSVYLRANVPNKVIQCFAETGQFQKIVLYAKKVGYT
PDWIFLLRSVMRVSPEQGLQFSQMLVQDEEPLANINQIVDVFMENSLIQQCTSFLLDALK
NNRPAEGHLQTRLLEMNLIHAPQVADAILGNQMFTHYDRAHIAQLCEKAGLLQRALEHYT
DLYDIKRAVVHTHLLNPEWLVNFFGSLSVEDSVECLRAMLSANIRQNLQLCVQVASKYHE
QLGTQSLVELFESFKSYEGLFYFLGSIVNFSQDPDVHFKYIQAACKTGQIKEVERICRES
NCYNPERVKNFLKEAKLTDQLPLIIVCDRFDFVHDLVLYLYRNNLQKYIEIYVQKVNPSR
IPAVVGGLLDVDCSEDVIKNLIMVVRGQFSTDELVAEVEKRNRLKLLLPWLESRIHEGCE
EPATHNALAKIYIDSXXXXXXXXXPYYDSRVVGKYCEKRDPHLACVAYERGQCDLELIKV
CNENSLFKSEARYLVRRKDPELWANVLEENNPFRRQLIDQVVQTALSETQDPEEVSVTVK
AFMTADLPNELIELLEKIVLDNSVFSEHRNLQNLLILTAIKADRTRVMEYINRLDNYDAP
DIANIAISNELYEEAFAIFRKFDVNTSAIQVLIEHIGNLDRAYEFAERCNEPAVWSQLAR
AQLQKDLVKEAIDSYIKADDPSAYMEVVQAANRNDNWEDLVKFLQMARKKARESYVETEL
IFALAKTNRLSELEEFISGPNNAHIQQVGDRCYEEGMYEAAKLLYNNVSNFARLASTLVH
LGEYQAAVDSGRKANSTRTWKEVCFACVDGKEFRLAQICGLHIVIHADELEELISYYQDR
GYFEELIALLEAALGLERAHMGMFTELAILYSKFKPQKMREHLELFWSRVNIPKVLRAAE
QAHLWAELVFLYDKYEEYDNAIITMMNHPTDAWKEGQFKDIIAKVANVELYYKALQFYLD
YKPLLINDLLLVLSPRLDHTRTVNFFSKVNQLLLVKPYLRSVQNHNNKGVNEALNNLLTE
EEDYQGLRASIDAYDNFDNITLAQRLEKHELIEFRRIAAYLYKGNNRWKQSVELCKKDRL
YKDAMQYAAESKDAELAEKLLQWFLEEGKQECFAACLFTCYDLLHPDVVLELAWRHNIMD
FAMPYFIQVMREYLTKVDGLFYKVDKLDASESLRKEEEQVTEPTPIVFGQQLMLTAGPSA
VPPQANFPYGYTAPGFTQPPVYGFNM
NT seq
4941 nt
NT seq
+upstream
nt +downstream
nt
atggaatctgacaagttcatctgcatcagggagaaagtgggagagcaggcacaagtagtg
ataattgacatgagtgatccaacaacacccatcagacgtccaatttctgctgaaagtgcc
atcatgaatccagcctctaaagtaattgctctaaaagctgggaaaacacttcagatcttt
aacattgagatgaaaagtaaaatgaaagcccacacgatggcagaggaagtgatcttctgg
aaatggatatctgtgaatacagttgccttggtgacagagacagcagtctaccactggagc
atggagggagaatcacaaccccagaagatgtttgacaggcatgctagtcttgcaggctgc
caaatcatcaattacagaacagatgaacaccagaaatggctgctgctgataggaatttca
gcacagcaaaatcgtgtggttggtgcaatgcagctgtactcggttgatagaaaagtctcc
caacctatagagggccatgcagcagcttttgcagaattcaaaatagagggaaatgccaaa
ccttctaccctcttctgttttgctgtgaggagtcccgcagggggcaagctacacataatt
gaagtaggtcagccagctactggaaatcaaccatttgttaagaaagctgttgatgtgttt
ttcccacctgaggcacagacagactttcctgtagcaatgcagattggagttaagcatggt
gttatctacctgatcacaaagtatggatatattcacatgtatgacttggagtctggagtg
tgcatctacatgaaccgtattagtgctgatactatctttgtcacagcacctcatgaacct
acctcaggcattattggtgtgaacaaaaaaggacaggtgctttctgtatgtgttgaggaa
gacaacatagtgaactacgctacaaatgttctccagaatcctgacttgggactgcgtatg
gctatacgtagtaatctggctggggcagaggaattatttgccagaaagttcaacacgcta
tttgctcaaggaagctacgcagatgctgctaaagtggctgcatctgcaccgaagggcatt
ctacgtaccagtgatacgatcaggaagttccagagtgtaccagctcagcctgggcaggcc
tctcccctgctccagtactttggaatattgcttgaccagggacagctgaacaagtttgag
tctctggagctctgtcgccctgtcctacagcagggccgcaagcagcttctggagaagtgg
ctgaaggaagacaagctggagtgctcagaggagctgggagacttagtgaagacagccgac
ccaacccttgcactcagtgtctatcttcgtgctaatgtgccaaacaaagtgattcagtgc
tttgctgaaactggacaattccagaaaatagtgctatatgctaaaaaggttggctatacc
ccagactggatcttcttattgcgaagtgtgatgagagtcagtccagagcaaggcctgcag
ttctctcagatgctggtacaagatgaggagccactggctaacattaaccagatcgtggat
gtattcatggagaacagtcttattcagcagtgcacgtccttcctgttggatgccctgaaa
aataaccgccctgcagaaggccaccttcagactcgccttctggaaatgaatttgattcat
gccccgcaggttgcagatgccattcttggaaaccaaatgtttacacactacgatcgtgct
catattgcccagttgtgtgaaaaggcaggcttgctccagcgagctttggaacactacacg
gatctctatgatattaaacgtgctgttgttcatactcacctcttgaatcctgagtggctt
gtgaatttctttggctctctctcagttgaagactctgtggagtgtttacgtgccatgctg
tcagccaacattaggcaaaacctacagctatgtgtgcaagttgcttctaaataccatgag
cagcttggtacccagtctcttgtggagctttttgaatctttcaaaagctatgaaggactc
ttctatttcttgggttccattgtaaacttcagccaggatccagatgttcacttcaagtac
atccaggcagcttgcaagactggtcagataaaggaagtggaaagaatctgccgtgaaagt
aactgctataacccggaacgggtgaagaactttctgaaggaggcaaagctcacagaccag
cttcctctgatcatagtctgtgatcgatttgactttgttcatgacctggtgctctactta
tatcgcaataacctgcagaaatatatagagatctatgtacagaaggtgaatcctagtcgt
ataccagcagtggtcggagggcttcttgatgtggattgttctgaagatgtcattaagaac
ctgatcatggtggttagaggccagttctcaacagatgagctggtggctgaagtggaaaaa
agaaatcggcttaagttgctgttgccatggcttgaatcaaggattcatgaaggctgtgaa
gaacctgcgactcataatgccttggccaaaatctacattgacagtnnnnnnnnnnnnnnn
nnnnnnnnnnnnccttactatgacagccgtgtagttggcaaatattgtgaaaagagggac
cctcatctggcctgcgttgcttatgagagggggcaatgtgatctggaactcataaaggtc
tgcaatgagaactcactgtttaagagtgaggctcgctatctggtgcgtaggaaggaccct
gagctctgggcaaatgttctggaagaaaacaacccattcaggcggcagcttattgaccag
gttgtccaaacagctttatcggagacacaggatccagaggaggtttctgtaactgtgaaa
gctttcatgactgctgacctgcctaatgaattgattgagttgttggaaaaaattgtcttg
gataattctgtattcagtgagcacaggaatctccagaatctgctgatcctgactgccatt
aaggctgaccgcactcgtgtgatggagtacatcaatcggctggataactacgatgcccca
gatattgcaaacattgccatcagtaatgagctatatgaagaagcttttgctatattcaga
aaatttgatgttaatacttcagcaattcaggtgctgattgagcacattggcaacttagac
cgtgcttatgaatttgcagagaggtgtaatgagccagcagtatggagccagctagccaga
gcacagctccagaaggacttggtgaaagaagccattgactcctatataaaagcagatgat
ccatctgcttatatggaagttgttcaagcagctaatagaaatgataactgggaggacctt
gtcaagttcttacagatggccaggaagaaggctagagagtcttatgtagagacagaactt
atttttgcattggcaaaaactaatcgcctgtcagaactggaagagttcattagtggccct
aataatgcacatatacaacaggttggcgatcgctgttatgaagaggggatgtatgaagca
gcaaaactactctataacaatgtatctaactttgctcgcctggcatctaccttggtgcac
cttggagagtatcaggcagcagtagacagtggccgcaaagccaacagcacaaggacttgg
aaggaggtatgctttgcctgtgtggatggaaaagaattccgcttggcacagatctgtggc
ctacacatagtcatccatgctgatgagcttgaagagctgatcagttactatcaggatcgt
ggctactttgaagaactgattgcccttttggaagctgctttgggcttagagcgtgctcac
atgggaatgtttactgaactggccatcttatactccaaattcaagcctcagaaaatgaga
gaacatctggagctcttctggtctagagttaatattccaaaggtgctcagagctgcagaa
caggctcatctctgggcagaacttgtattcctctatgacaagtacgaggagtatgacaat
gcaataattactatgatgaatcatcccactgatgcttggaaagaagggcagtttaaagat
ataattgccaaggtggccaatgtggagctgtactacaaagccttgcagttctacttagac
tacaaacctctgctgatcaatgatctcctgcttgtattatctccacgactggatcacacc
aggacagtcaattttttctcaaaggttaatcagctacttctagtaaagccttatctgcgt
tcagtccagaaccacaacaacaaaggagtgaatgaagctctgaacaaccttttaacagag
gaggaagactaccagggtttgagagcttccattgatgcctatgacaactttgataacata
acgttggctcagcgtctagaaaagcacgaactaattgaatttaggcgtattgcagcgtat
ttgtacaagggtaacaaccgctggaaacagagtgtggagctatgcaagaaagaccgcctg
tataaggatgctatgcagtatgcagcagagtccaaagatgcagaactagctgagaagctc
cttcagtggtttctggaagaaggcaagcaggagtgctttgcagcctgccttttcacatgt
tatgacttgctgcacccagatgtagtccttgagttggcgtggaggcataacatcatggac
tttgcaatgccttatttcatccaagtgatgagagagtaccttaccaaagttgatgggctg
ttctataaggtggataaacttgatgcttctgaaagcctaagaaaagaagaggagcaagta
actgaacccactccaatagtatttggccagcagttgatgttaacagcaggccccagtgca
gtacctccccaggcaaacttcccatatggatacacagcaccaggattcacccagccacct
gtttatggtttcaatatgtaa
DBGET
integrated database retrieval system
