Columba livia (rock pigeon): 102098975
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Entry
102098975 CDS
T02912
Name
(RefSeq) LOW QUALITY PROTEIN: uncharacterized protein LOC102098975
KO
K05769
Rho guanine nucleotide exchange factor 4/29
Organism
clv
Columba livia (rock pigeon)
Pathway
clv04810
Regulation of actin cytoskeleton
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09140 Cellular Processes
09142 Cell motility
04810 Regulation of actin cytoskeleton
102098975
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
clv04131
]
102098975
Membrane trafficking [BR:
clv04131
]
Others
Rho GTPase associated proteins
Rho guanine nucleotide exchange factors (GEFs)
102098975
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RhoGEF
SOS1_NGEF_PH
PH
SH3_1
SH3_9
SH3_2
RHG20_PH
Motif
Other DBs
NCBI-GeneID:
102098975
NCBI-ProteinID:
XP_005509658
LinkDB
All DBs
Position
Unknown
AA seq
2262 aa
AA seq
DB search
MAALPIRRTRYMKAKFTLTAYRTCWLLLKLCKKAYEKRLSASEKECQGGAVRRTAGGTEK
STSEKRQLHIQTPEPAENYISEGEFEDDLNSSTPSTIELEIRGSSQETDEDYFETQSHQS
GSLSDVKTEPYESVSDTESVSSDITGETCLDPNCLFTEKKNLCCSLPKAKAETALQELKC
SRQPEFTQQVWSEVSSKIKATPSKTEFCIQSVKSEGEELHDEELTLTSDISNTENQVSEE
DIISQIHRKFVAVLQNKAEFESSKVQSCANFIPIEDGVTRQKEHPAVLSIACFKANSESS
LVFPEVQKFSFQSDAASSCSLPNLRFETDGPNRKSDTGTSDYKCELDSMCSIKCSKRNSV
DSEETTGKTIKHEGTETMLTSESFFYQTCFNPKSQPPLRRSEITEGKTWHSVPENISAQS
RTEYIGNCIHLTDKFRWSCSRVHLQGLDFEYTWKNLGRVPVSHEKATKIEGKFDVERSLL
NTDIDSNDCQLSQPAGSPQCVDYDLHYKSEMCGLSPEAADTCADILTSTQTDAFVCNLKQ
KETSSALDCEPLIRNAEELIKSHHYKAERDLEADRSTCDIDVQPGIGDTENLADSHVAFP
PVVENRDCDCAVNCVSICRTQQKCLKGSGLESELSGMKVVVGKRWVDDSSNLDFGCKVLE
ATMQPGGSSTEAEHKESMQQSTGCKTGALRSRSDLVTNEHPAPTGKDEDSVFAVEMTPRS
NYIGQRRHLMTLPELKPGLIIVSVEQKGLQSQTLNYNLPTEVVTGPLRNAVSKDLMSPHT
VSKAHDELERVLSESCSCEEQILATHLIPGGAEVLPGRDTAEEKTEVSQEKREETDAVSS
SGLIYSNSMVTSAKVEFESVTVPLDHNTLIAESQADQCEEAVFKSHSRSGVMISEKEPCR
TKTGFEIEREQLRRSWAEIRDDQVSKEEEFKVHQGGEEGLDRSSAVTLERCNVSDLCQGD
GADADHQGPIIISEQAAGRQGTEGCNDSMEQMGICEEPSPGEGKEGSPAEDTASPSKDST
QNPDVSDYLNCSVKREIHDACVLGLDNISTCSTNSEEMDENSFHILGGHSSLYKAVQKPT
KNGNNGKASRFLVFSKMTSFRKTKPAITENQGSSSLFGTKAKMEELGAGKEDEDTESLQS
FKSCSSGSAFHRKESYTSEYSDDDDLFYERPTGLFNRMSLRKASGSGRILMEDVDTNSTS
PTLAAVKYAEQQISSSSENNDSEPVEYSGVRKSFPENEYKRNKTPDGKKFKTRLALAHKS
LSSLFESKSPEKENTEQSSRVPLKNEKEKARFRQSAWKAFLKSKEADGLRRPVLASLSPT
QESATRGHVMRTTSVERQDSSSGHTFFKTETGNVSSTDTNYLDTSVEPVDVSSPAGVWRK
RIQSHDLGIRYSQSSDCDEQQEALSNCLNTSLEEYWMKSPFSPTDLQSSFSQSSPSCPQL
SNSDGKDMPCRPMSPKPQSPRSTSQPKSFRYPGRICATSMISLGNSSAVESSLEAPERPK
TLKPRGSLLLSVHSLDNEYQRDDSGISSQSQISFTTAASISDMLRDEESKQQCQTPPEKR
PNEKWLPHRKRRLPEVPPSPHPISTLESKAWRLTFLAPDEKSKEIPERRRKRPKPLYKCF
SFDDVWMERNQKRKLEKETQPERGIQLQHLPEDQLKAGISPSIMSAVALDILPLKMHPFS
RSTPTGLDCVGWKRRVSSPVIADAALDKTALTDDVGSEEDLYEDFRSSNHRYGHPGGGGE
QLAINELISDGSVVYAEALWDHVTMDDQELGFKAGDVIEVMDATNKEWWWGRILDSEGWF
PASFVRLRVNQDEPMEDYPLKVEGGKEDDSSSGTRRFGMGQTTKDQMRTNVINEIISTER
DYIKHLKDICEGYIKQCRKRADMFTEEQLKTIFGNIEDIYRCQKKFVKALEKKFNKDHPH
LSEVGSCFLEYQTEFQIYSEYCNNHPNACMELSRLTKVNKYVYFFEACRLLQKMIDISLD
GFLLTPVQKICKYPLQLAELLKYTNPQHRDFKDVEAALNAMKNVARLINERKRRLENIDK
IAQWQSSIEDWEGEDVLVRSSELIYSGELTKISHPQAKSQQRMFFLFDHQLVCCKKDLLR
RDILYYKSRINMDDMEILDVEDGKDKDFNISVKNAFKLHCRDTEEVHLFCAKKPEQKQRW
LKAFENERRQVQLDQETGFSITEVQKKQAMLNASKQHHTGKPKAVTRPYYDFLMRQKHPT
LPTTLPQQQVFMLAEPAQALKLLAEHQQADALPEIRAARVCA
NT seq
6789 nt
NT seq
+upstream
nt +downstream
nt
atggcagctctacccatcagaagaaccagatacatgaaagcgaaattcactctgacagct
tacaggacctgctggctgttgctgaagctctgcaagaaagcctatgagaaacgactctct
gcttcagaaaaggagtgccaaggaggtgctgtaagaaggacagctggaggaacagaaaag
agtacttctgagaaaaggcagctccacatccagaccccagagccagctgaaaactacatc
agtgaaggagagtttgaagatgatctgaattcttctaccccaagcacaatagagctagag
atacgtggatccagccaggaaacagatgaagattattttgagacccagtcacatcagagt
gggtctttgtcggatgttaaaactgagccttatgagagtgtatcagacacagaatctgtt
tctagtgacataactggggaaacatgcttggatccaaactgcctttttactgaaaaaaaa
aatctgtgctgtagtcttcctaaagcaaaggcagaaacagcccttcaggaacttaagtgc
tcaaggcaaccagaatttacccagcaggtgtggtcagaagtgtcctccaaaataaaagca
acaccaagtaaaaccgaattttgcatacaatctgtgaagtcagaaggtgaagaattgcat
gatgaagagctaactttaacaagtgatatttcaaacacggagaaccaagtcagtgaagag
gacattatatcacagatacatagaaagtttgtagcagtattgcaaaataaagcagagttt
gaaagcagtaaagtgcagtcttgtgccaacttcatacccatagaagatggtgttacaaga
cagaaggaacatcctgcagtattaagcattgcttgtttcaaagcaaactcagaaagttca
ttggtttttcctgaggtacaaaaattttccttccagtcagatgcagcatcaagttgtagt
ttgcctaatcttcgttttgaaacagatggacctaaccgtaaaagtgacaccgggacatct
gactataagtgtgaattagattctatgtgcagtataaaatgcagcaagagaaactcagtt
gacagtgaggaaactacaggtaaaacgataaaacatgaaggtacagaaaccatgttgaca
tcagagtcattcttttaccagacctgcttcaacccaaaatctcagccaccactcaggagg
tcagagattacagaaggtaaaacatggcacagcgtacctgaaaatatcagtgctcaaagc
aggacagaatacatagggaactgtattcatctgacagacaaatttagatggtcatgttcc
agagtacatcttcaagggctggatttcgaatacacttggaaaaatttaggaagggtacct
gtaagccatgaaaaagcaacaaaaatagagggcaaatttgatgtagaaaggtctcttctt
aatactgacatagactcaaatgactgtcagctttctcagccagcaggctctccccagtgc
gttgattatgatttgcactataaatcagagatgtgtggccttagcccagaagcagcagat
acatgtgctgatatcttaacttctacacagactgatgcttttgtgtgcaatctcaaacaa
aaggagacttcatctgccttggactgtgagccactgatcagaaatgctgaagaacttata
aaaagtcaccactacaaagctgaaagagacctggaagcagacagatccacttgtgatatt
gatgttcagcctggcattggtgacactgagaacttagcagatagtcatgtagcttttcct
cctgttgtggaaaacagagattgtgactgtgctgtaaactgtgtttccatttgtagaaca
cagcagaaatgtttgaagggtagtggccttgaatctgaactgtcaggtatgaaggtcgtg
gtaggaaaaagatgggtagatgattcttctaacctcgactttggttgtaaagtcctggaa
gccacaatgcaaccaggtggcagcagcactgaggcagagcacaaagagtcaatgcagcaa
agtacaggttgcaaaactggtgccttaaggagtcgttctgacctagtaacaaatgaacac
cctgctcctacaggaaaggatgaagacagtgtctttgctgttgaaatgactcccagatca
aactatataggccagagaaggcatttaatgactcttccagagttaaagcctggcctaatt
atagtatctgtagagcagaaaggattacagtcccagacactgaattataaccttcctact
gaagtggtaactggaccattgagaaatgcagtgagcaaggacttgatgtctcctcatacc
gtcagcaaagctcatgatgagctggagagagttctgagtgaaagctgtagctgtgaagaa
cagattctggccacccacctcattcctggtggtgcagaggtactccctgggagggataca
gctgaagaaaaaacagaagtttcacaagagaagagagaagaaacagatgcagtttcatct
tcagggttaatctatagtaattccatggtaacaagtgcaaaagtggaatttgagagtgtt
actgtaccactggaccataatacacttattgcagaaagtcaggcagatcaatgtgaagaa
gcagtctttaaatcacatagcagaagtggtgtgatgatctctgagaaagagccttgcaga
acaaagactggatttgaaatagagagagaacagctcagaaggtcatgggctgaaataaga
gatgaccaggtgtctaaggaagaggaattcaaagttcatcaaggcggagaggaaggctta
gatagaagtagtgcagtaacactggaaaggtgcaatgtaagtgatttgtgtcagggagat
ggggctgatgctgaccatcaagggcccatcatcatctctgaacaagcagcaggcaggcaa
ggaactgaaggctgtaatgattcaatggaacaaatgggtatttgtgaagaaccttctcct
ggtgaaggaaaggagggctctcctgcagaagacacagcaagccctagcaaagacagtaca
cagaatccagatgtgtctgattacttgaactgttctgtgaaaagggagatccatgacgct
tgcgtgctgggcctggataacataagtacctgcagcactaacagcgaggaaatggatgag
aattcattccacatcctaggaggtcacagcagtctctataaagctgtgcaaaaaccaaca
aagaatgggaataatgggaaagcttccaggtttttagtattctcaaaaatgacatctttc
aggaaaactaagcctgccataacagaaaatcagggaagtagcagcctctttggcaccaag
gcaaagatggaagaactgggtgctgggaaagaggatgaagacactgaaagtttacagtct
ttcaaaagttgttcatctggttcagccttccacaggaaggaaagctacacctctgagtac
tctgatgacgatgatttattctatgagagacccacaggattgttcaacagaatgagcctg
aggaaggcttctggctctggtcggatcctgatggaagatgtagatacaaattcaacttct
cccacactggctgctgtcaaatatgctgaacaacagatttctagttcatctgaaaacaat
gacagtgaacctgtggaatactctggggttagaaaatcgttccctgaaaatgaatacaaa
agaaacaaaacccctgatggtaagaagttcaagacaaggctggccttggcacacaaatcc
ctatcaagcttatttgaatcaaaatctccagaaaaggaaaatactgagcaaagctcaaga
gtaccactgaaaaatgaaaaggagaaagctagatttcgccagagcgcctggaaagctttt
ctaaaaagcaaggaggcagacggactaagaaggcctgtcttagcaagtttatcaccaaca
caggagagtgcaactagaggccatgtaatgagaacaacttcagtagagcgacaggatagt
tccagcgggcacacattttttaaaacagaaacaggtaatgtctcctcaacagacaccaac
tatttggacacctctgtggaacctgttgatgtctcctcacctgcaggtgtgtggagaaaa
cgaatacagtcccatgacctgggcatcagatactcacagagttcagactgtgatgaacaa
caggaggctctgagcaactgtttaaatacttctctagaggaatactggatgaaatctcca
tttagccccacagacctgcagtcgtcatttagccagtcaagtccatcatgtccccagctc
tcaaattctgatggtaaagacatgccttgtaggcccatgagtcctaaaccgcagagtcca
cgatccacgtctcaacccaagagcttccgttatcctggaagaatatgtgccacttcaatg
atctctcttgggaacagctctgcagttgaaagcagtttggaagctcctgagagaccaaaa
acactgaaacccagaggtagtctcttactttctgtacactcgttggacaacgaataccag
agggatgacagtggcataagcagtcagtcccagatcagcttcaccacagctgcttccatt
agtgacatgctccgagatgaggagtctaaacagcaatgtcaaacaccacctgaaaagagg
ccaaatgagaaatggcttcctcatcgcaaacgaaggctccccgaggttccaccatcccca
caccctatctccacccttgagagcaaagcctggaggctcaccttccttgctccagatgaa
aaatccaaggagattccagagaggagaaggaagagacctaaacccctctataagtgcttc
agcttcgatgatgtttggatggagaggaaccaaaaaaggaagctagagaaggagacacag
ccagagagagggattcaattgcaacacctcccagaggatcagttaaaagctggaataagt
ccatccatcatgtctgctgttgccttggacatcctgccactgaaaatgcatccattttcc
cggagcactccgacgggcttagactgcgtgggctggaagaggcgcgtctcctctcctgtg
atcgctgatgcagcgctggataagacggctctcacagacgatgtggggagcgaggaggac
ctgtacgaggacttccggagctccaaccaccgctacggccaccctgggggtggcggagag
cagctcgccatcaatgagctcatcagtgatggcagcgtggtgtacgcagaagccctctgg
gaccatgtcacgatggatgaccaagagctgggattcaaggctggtgatgtcattgaagta
atggatgctaccaacaaggagtggtggtggggaaggattctggacagcgaaggctggttt
ccagccagcttcgtacggctccgagtaaaccaggatgaacccatggaagattatcccctg
aaggtagagggtggcaaagaggacgactccagcagtggcacccgccgctttgggatgggg
cagaccaccaaagatcaaatgaggaccaacgtcatcaatgagatcataagcacagagagg
gactacatcaagcatctgaaggacatttgtgagggttacattaagcagtgccgcaaaaga
gctgatatgtttacagaagagcagctgaagacaatctttgggaatattgaggacatctac
aggtgccagaagaaatttgttaaagcactagagaagaaattcaacaaagaccacccacat
ttgagtgaggtcggctcatgcttcttggaatatcaaacagagtttcagatatattcggaa
tactgcaacaaccaccccaacgcctgcatggagctctcccgcctcaccaaagtcaacaag
tacgtctacttcttcgaagcctgccgcctgctgcagaagatgatcgacatctctctggat
gggtttctgctgactcctgtgcagaaaatctgcaaatatccactgcaactggctgaactg
ctcaaatacaccaacccccaacacagggattttaaagatgttgaagctgccttaaatgcc
atgaagaacgttgctcggctcatcaatgagaggaagcggcggctggagaacattgacaag
atcgctcagtggcagagttcgatagaagactgggagggtgaagacgtcctagtcagaagc
tcagaactcatctattctggggaattaacaaaaatctctcaccctcaagccaagagccaa
cagaggatgttcttcctcttcgaccaccagcttgtctgctgcaagaaggaccttctgcgt
cgggacatcttgtattataagagtcggatcaacatggatgatatggaaatactggatgta
gaagatgggaaggacaaggacttcaatatcagtgtgaaaaatgcatttaagttgcactgc
cgagacactgaggaagtccacttattctgtgcaaaaaagcctgagcagaaacagcgctgg
ctgaaggcatttgagaatgaaaggagacaggttcagcttgaccaggagacaggattttca
atcacagaggtgcagaagaagcaggccatgctgaacgccagcaagcaacaccacactggg
aagccaaaggctgtcaccaggccatactatgactttctgatgcgtcagaagcatcccacc
ctgcctaccacgctccctcagcagcaagtcttcatgctggcagagcccgcgcaagccctc
aaacttctggcagaacatcagcaggctgacgcccttccggaaataagggcagcccgtgtt
tgtgcctga
DBGET
integrated database retrieval system
