Columba livia (rock pigeon): 110358715
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Entry
110358715 CDS
T02912
Name
(RefSeq) DNA mismatch repair protein Mlh3-like
KO
K08739
DNA mismatch repair protein MLH3
Organism
clv
Columba livia (rock pigeon)
Pathway
clv03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
110358715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clv03400
]
110358715
DNA repair and recombination proteins [BR:
clv03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
MutL homologs
110358715
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_mis_repair
HATPase_c_3
HATPase_c
Motif
Other DBs
NCBI-GeneID:
110358715
NCBI-ProteinID:
XP_021143119
LinkDB
All DBs
Position
Unknown
AA seq
1281 aa
AA seq
DB search
MIKRLVEDVRARLRSGVTISSVGQCVEELVLNSIDAKATCVAIRADLEAFKIQVVDNGSG
MGREDLNAMGKRYFTSKCSSVGDLENLTFYGFRGEAVASIANMATVVEVSSKTSRTAKTF
VKLFHNGQALEVCEAELSRPSGGTTVTVCNLFYQLPVRKKRMDPVLELERVRHKVEAISL
MHPSVSLSLRNDAAASMVLQLPKTRDIYSRFCQIYGLGRSQKLREINHKSGGFELSGYIS
IEGHYNKNMQFLYVNRRLVLKTRIHKLIDFLLRKESVICCKAKSGPVSRQAGASAGRYRC
VPELYGIFILNVTCAYSDYDVCLEPAKTLIEFQNWDVLLTCIEEGVKVFLKREHLFVEPC
GEDIREFNEENNFCLYNAPVLKPSLSDKKSTQDNFKKACDEIADSYEMCSLQSKDVKRKS
MSGKKSLSLIESNKNLQETEMAPYQKIAEPSDLCRNNHVEIPLPIKDDTASDFIVSNISE
QEPKDTNSSQKSSDTHLKPSENLCSSFSGGAISETRKIVSCGDLQHSAENYIKDMGSKQG
KVVEKRNTVCILNNDVIRSPSEREDLTETAMGTETVSGSSLMRTGDRETAEVIDDAGRGA
VSSVPLKSCSTSLIKHVTQNQPTHACEQTEMNLSLNTQCRPGPIRTQDTFGHKVSFLIQS
LNAKDISSNTSEEYTPLLTREVCMADGSERSENKTFPNQVSEGITMPIATSKRHYKTLNV
TGLPEATSSCVPHNKMIKSTRRQIALPRPQPPKKLSLCTQLGSLEKFRRYYGRVRCVLPT
PLSEQSEFGLPVFNSQANCGFSKNGNDNHGSVSTSETPTLEDTDPSNSIQVFDALEETSL
CSGETSQDKQALCLSPLTSSDYSQVSKKIIRCRKSPGSLSSKLSRLKSDHKEVAQLGEQF
QTDSSRKDDYSFDLESSNNDFLYNACQTYKSLEEKMKECNYSISKEDVCSQPDGTRAESM
KSTVSLSPLSSTEGEYTVSSGSVLPAQEDCTNITCEEKSTLGESSEQNLKDTEVPHMTFP
SNLEFSADNTSAGNPRNDLWCSNWLQDFDVSLGKTIYINKTTGLSTYSTPPAEAFQAACI
QDITTMAVNVVTQNGFQFRCHPFRSEIVLPFLPRPRKEKTLASQDLRDAEGESLQSLLSE
WDNPVFVPCPEVAVDVTSSQADNLAVKIHNILYPYRFTKDMVHSMQVQYNLLLVFALKLP
LSRWDLLMFLPVEKEISREMDPADDQHKSLNTGQVKKVCLHSLLVIPANQILRVTMHSFN
SQLMEASTQAFNLCCKFPAPP
NT seq
3846 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaacgtttggtggaagatgtgcgagccaggctgcgctctggagtgactatcagc
tccgtggggcagtgtgttgaggagcttgtcctcaacagcattgatgccaaagcaacatgt
gttgctatcagggcggatctggaagcttttaagatccaggtggtggacaatggttccggg
atggggagagaggacttaaatgcaatgggaaagcggtacttcaccagcaagtgcagctca
gtgggagacttggagaacctgacattctacggctttagaggggaggctgtggcgagcata
gccaacatggccactgtagtggaagtctcatctaagaccagcaggacagcaaaaacattt
gtgaaactatttcacaatgggcaagcactggaagtttgtgaagctgaattgagcagacca
agtggcggaactacggtgacagtgtgtaatctgttctatcagttaccggtgaggaaaaag
cgtatggatcctgtgttggagcttgagagagtgagacataaagtagaggctatttcgctg
atgcatccttctgtttcactttctttaaggaacgatgctgctgcttctatggtgcttcag
ctccctaagacaagagatatatattctcggttttgtcaaatttacggactgggcaggtca
cagaagttacgagaaataaatcataagtctgggggatttgagctaagtggttatatcagc
attgaaggacattacaataagaatatgcagttcttgtatgtgaatagaaggcttgtttta
aagacaagaatacacaaactgattgattttttattaagaaaagaaagtgtcatctgctgc
aaggcaaaaagtggccctgtgagcagacaggctggtgcaagtgctggtcgctatcgctgt
gttccagagttgtatgggatctttattctcaacgtgacttgtgcatacagtgactatgat
gtgtgtctagaacctgcaaaaactctaatcgagttccagaactgggatgttcttctaact
tgcatagaggaaggagtgaaagtatttttgaaacgagaacatttattcgttgaaccgtgt
ggtgaggacatcagagaatttaatgaggagaataacttttgtttgtataatgctccagtt
ttgaagccctcactctctgacaagaagagcacccaagacaattttaagaaagcatgtgat
gaaattgcagattcctatgaaatgtgcagcttgcaatcaaaagatgtcaaaaggaaatcc
atgtcggggaaaaaatccttgagtcttatagagtcaaataaaaatctacaggaaactgag
atggccccgtatcagaagattgctgaaccatctgatctgtgtagaaataaccatgtggag
attccactgcccatcaaggatgacacagcttctgatttcattgtatcaaatatctcagaa
caggagccaaaagacaccaacagttcccaaaaatcatctgatactcatctgaaaccttca
gaaaatctttgttcctcttttagtggaggggccatatcagaaacaagaaaaatagtcagt
tgtggtgacctgcagcattctgcagagaattacataaaagatatgggaagcaagcaaggg
aaagtagtggagaaaagaaatacggtctgtatcttaaacaatgatgttattcggtcacca
tctgagagagaagaccttaccgaaacagcaatgggaactgaaactgtctctggaagttca
ttgatgaggacaggagacagggaaactgctgaagtgatagatgatgctggacgaggcgcc
gttagttccgtgccattaaaatcgtgctctacaagcctcataaaacatgttacgcaaaat
cagcccacacatgcatgtgaacaaacagaaatgaatctttcattaaacacgcagtgtaga
cctggccctatcagaacccaggatacttttggccacaaagtgagttttttaattcagtct
ttaaatgctaaggatatttccagtaatacaagtgaagaatatacacctcttttgaccaga
gaagtatgcatggctgatggtagtgagcggtcagagaacaaaacatttccaaatcaggtg
agtgaggggataactatgcctattgctaccagtaaaagacattataagacattgaatgtt
acaggattgccagaggcaacttcttcatgtgttcctcacaataaaatgataaaaagcact
agaagacaaatagctctgccgagacctcagccccctaagaagctgagcttgtgcacacag
ctgggttcgttagaaaagttcaggagatactatgggagagtcaggtgtgtgctaccaaca
ccgttgtcagagcagagtgaatttggtctccctgtttttaattcacaagctaattgtggc
ttttcaaagaatggaaatgacaaccatggtagtgtgagcacttctgaaactccaactttg
gaagatacagatcctagtaatagtatccaagtttttgatgctttggaagagacttcatta
tgcagtggagaaacttcacaggacaaacaggccctttgtctaagtccattgacatcgtct
gattactctcaggttagtaaaaaaattataagatgtagaaaatctccgggatcattatca
tccaaactgtccagactgaaaagtgaccacaaagaagtagcacaacttggtgaacaattc
caaacagactcaagtagaaaagacgactacagttttgatcttgaatcttcaaataatgat
tttttgtacaatgcttgtcaaacatacaaatccttagaggaaaaaatgaaggaatgtaat
tacagcatttctaaggaggatgtgtgctcacaaccggatggaacgagagcagagtccatg
aaaagtactgtcagcctgtcaccactcagcagcacagaaggggagtacacagtctcttca
ggtagtgttttacctgctcaagaggattgtactaacatcacctgtgaagagaaaagtaca
ttaggtgaatcctcagaacaaaatctgaaagatactgaggttccccatatgaccttccca
agtaacttggagttctctgcagacaacacaagcgcaggcaatcccaggaatgatttgtgg
tgttcaaactggctgcaggattttgatgtttcgttgggtaagacaatatacatcaataaa
acaactgggctgagcacctacagcactcctcccgctgaggcatttcaagctgcctgcatt
caagatataacaacaatggctgtgaatgttgtcacacagaatgggtttcagttcaggtgc
catccctttagaagtgagattgtgctgcccttccttcctagacctcgaaaagagaagact
ctagcaagccaggatctgagagatgctgaaggggagtctctccagtcgttgctttcagaa
tgggataatcctgtttttgttccttgcccagaggttgctgttgatgtgaccagcagtcag
gctgacaatctggctgtgaaaattcacaatatcttgtacccttatcgtttcaccaaagat
atggttcattcaatgcaggtacaatataatctattactagttttcgcactcaaattgcca
ctcagtcgatgggatttgctgatgtttctgcctgttgagaaagagatatccagggaaatg
gatcctgcagatgatcagcacaagtccttaaacacagggcaggttaaaaaagtttgttta
cattctcttttggtgataccagcaaatcaaatactcagagtcactatgcacagctttaat
tcccaactcatggaggcttctacccaagcatttaatctgtgctgtaaatttccagctcca
ccttag
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