Corynebacterium lactis: CLAC_02955
Help
Entry
CLAC_02955 CDS
T04042
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
clw
Corynebacterium lactis
Pathway
clw03420
Nucleotide excision repair
clw03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
clw00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
CLAC_02955
03430 Mismatch repair
CLAC_02955
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clw03400
]
CLAC_02955
Enzymes [BR:
clw01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLAC_02955
DNA repair and recombination proteins [BR:
clw03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
CLAC_02955
MMR (mismatch excision repair)
Other MMR factors
CLAC_02955
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
ALA66864
UniProt:
A0A0K2GYJ9
LinkDB
All DBs
Position
692679..696191
Genome browser
AA seq
1170 aa
AA seq
DB search
MESKMKDIDPITLSRMMGQAFPPTEQQAAVIGAPLEPMLVVAGAGAGKTATMAARVVWLV
ANGYVRPEEVLGLTFTRKAANELGVRIRQQLHQLAGARDFRAEASPEVLRRLEVIAPSTS
TYDAYASEIVKNYGLLLPTEPGVSILDGATQWQLAWDIALAAKAIKSDIAPTTLAERIIY
LGANMDSNLSSVLETKEETEAFIHNIQQSPKGPRQRAEMQTDLQNVIDAQRQRLELLPLL
EQMRAKCDSENLATFATQMARAAQLASRFEEVARAERSRFKVVLLDEYQDTSHTQRLFLR
ALYSGACVTAVGDPMQAIYGWRGATAENLNQFVSDFPRSDGSPAEKKQLTISWRNPATVL
DLANSLSDSAFAGQKRTVERLTAGPKAGDGEVTLSVLGTGEEEVGYIADLLAEEMRQRTA
VGQSLSAAVLVRTNEESPAYLDALSERGVPAVIVGLAGLLSLPEVMDITSTMKVLINPSS
DEDTLRLLLSPRFNIGAADVEQLRVRVQQLANVGQSERHDSSADTMLPKSPLEEFAARLD
ALVEESEEAGETLGLAHAIADPDIRFSDGTPLARGQESENGPMVSGRLLNYSEEGMRRIA
ELGAILRRLRRFSLVKTLPELVEDIAEELGIRVEAAAGQFGEATAITRPTVAHIDRFVDI
AAQYSQTNSDDVSAFLGYLDFAIDHDGGLDRAPVEVPPNCVHILTMHKSKGLEWDTVVVP
RVTAAQFDKPKVSSWLSRPDIVPPGAVAEVAPLAKENASEEKSSPGEVDAALTQMEASES
TVNGVPELDISGAENQSKLKEALNEYKDQLRQLLVEEAQRLFYVAVTRAERKLVVTASIR
PKAKNKTSTEPSHDFTKIAKKFPNHIDVWVTKESILEGGGEDSETSADADNPAIDGALWP
ADTLGNRREQVEAAARNVRRFLEDGSDEAPIKDDLSQVWESETTLLIEELRRKKADDIVL
PMPQSLSTSEYQALVSDPEGFARRKVRPVPFKPNRFARRGTAFHAWLENRFQAHSLLDDE
DLYSDRLDVFLEQEESVSERELRNLQANFEASEWADRTPEYVEVPFEISIGARRIIGRID
AVFNLGGRWTVIDWKTGRPPQGKALEIAALQLAIYRLAWSDRLQEMGLDISPTQISAGFF
YVGAGKTLMPDEALLPSRIELDRKMKELLS
NT seq
3513 nt
NT seq
+upstream
nt +downstream
nt
atggagtcgaagatgaaggatattgatccgattaccctgtcgcggatgatggggcaggca
tttcccccgacagagcagcaagcggcagtcatcggtgcgccacttgagccgatgctcgtg
gtcgcgggcgccggcgccggaaagaccgcaacaatggcggcgcgagtcgtatggctggtc
gcaaacggctacgttcgtccggaggaagtactcggcctaacctttacccgcaaggcagcc
aacgaattgggcgtgcgcatccggcaacagcttcaccagttggctggggccagggacttt
cgcgcggaagccagcccggaagttctgcgaaggctggaagtaatcgctccgtcgacttca
acttacgatgcctacgcctcggagatcgtaaagaactacggcctattgctccccacagag
ccaggcgtaagcattcttgatggggcaacgcagtggcagctggcatgggatattgccctc
gctgcgaaagcgattaaatcggatatagcgccgacaacgctcgcagagcgaatcatttac
ctcggtgcgaatatggactcgaacttgtcctcggtgttggaaacgaaagaagaaaccgag
gcgttcatccacaacattcagcagtccccaaaaggcccgcggcagcgggcggagatgcag
actgatttacaaaacgtaatcgacgctcagaggcagcgtctcgagttgctaccgcttctg
gagcagatgcgagcgaaatgcgattccgagaacctggcgactttcgccacacaaatggcg
cgagcagcacaactggccagtcgatttgaggaggtcgcccgcgccgaacgctcgcggttc
aaagttgtgttgctcgacgaataccaagacacctcgcacacgcagcgtctcttcctccga
gctctgtactccggggcatgcgtgaccgcagtgggtgatccgatgcaggcgatttacggc
tggcgcggtgctactgcagagaacctcaaccagttcgtgagcgatttccctcggtcggac
ggcagtccagcggagaagaagcaactgaccatttcgtggcgaaacccagctacagttctg
gacctcgccaattccctctccgacagtgccttcgcggggcagaagcgtacggtagagcgc
cttaccgctgggcccaaagcaggagacggagaggttactctgtccgtgttgggtacggga
gaggaagaagtcggctatatcgcagacttgttggctgaggagatgcgacagaggactgcg
gtcggccagagcctcagtgccgcggtgctcgtgcgtaccaacgaggaatcgcccgcgtat
ctagatgctctctcagaacgaggtgtacctgcagtaattgtgggtcttgcgggacttctc
agcctcccagaggtgatggatattacctcgacgatgaaggtactcattaacccgagcagc
gacgaagatacgctccgactgctactcagccccaggttcaacattggggcagcagacgtg
gaacagctccgtgttcgagtccagcagctggcgaacgtggggcagagcgagcggcatgat
tcgtccgcggatacgatgctgccgaaatctccgcttgaagagttcgctgcacggctagat
gccctcgttgaagaatccgaggaagccggcgaaactctcggcttggcccatgcgattgct
gaccccgatatccggttcagtgacggcacgccgctcgctcgcggtcaggaatcggaaaat
ggtcctatggtcagtgggcgcctgctgaattactccgaagaaggcatgcgccgaattgcc
gaattgggagcaatccttcgtagactgcgtagattctccttggtcaaaacgttgcccgag
ctggtcgaagatatcgctgaggagctggggattcgtgtagaggccgcagctggtcaattt
ggcgaagcgactgcgattacacgtcccacagtggcgcacattgaccgtttcgtggatatc
gccgcacagtactcccagaccaattcagacgatgtttcggcgtttctcggatatctcgat
ttcgctatcgaccacgatggcggactcgaccgcgctccggttgaggttccaccgaattgt
gtccacattctgacgatgcacaagtcgaagggcctggaatgggataccgtcgtcgtaccg
cgggtaactgcagctcagtttgataagccgaaagtttcatcctggttgagtcggccggat
attgtgccgccgggcgcggtcgcagaagtggctccgctagcgaaggagaatgcttcagaa
gagaaatcttcgcctggcgaagtggacgctgcactgacgcaaatggaggcgtcggaaagc
acggtaaacggggtaccggaactggacatctcaggggccgaaaaccagtccaagctaaaa
gaagcactcaacgagtacaaagaccagctccgccagttgctagttgaggaggcgcaacgg
ctattctacgtcgcagtgacccgggccgagcgcaaactggttgtcacggcgagtattcgc
cccaaagcgaagaacaaaacatcgacggaaccgtcgcatgatttcacaaagattgccaag
aaattccccaatcacattgacgtgtgggtgaccaaggaatcaatcctggaaggaggcgga
gaagactccgagacttccgcggatgcagataatccggcaatcgacggggctttgtggccg
gcggatacgctcggtaaccgtcgtgagcaggtggaggccgcagcccgaaatgtgcgacgt
tttctcgaggatggttctgacgaagctcccatcaaggacgatttgtctcaggtctgggag
tccgagacaacacttcttatcgaggaactgcgcaggaagaaggctgacgatatcgtgttg
ccgatgccgcagagcctgtcgaccagcgagtaccaggctttggtgagcgatccggagggc
ttcgcccgccgtaaagtgaggccggttccgtttaagcccaatcgatttgctcgtcgaggc
acagcgtttcacgcgtggttggaaaaccgcttccaagcgcacagcctgctggatgacgaa
gacctctactctgaccggctcgatgttttcctggagcaggaagaatcggtgtcagagcgg
gagctgcgtaatctgcaggcaaactttgaggcgtccgagtgggccgaccgtacccccgaa
tacgtcgaggtgcccttcgaaatctccattggtgctcgcagaatcattgggcgcatagat
gcggttttcaaccttggtgggcgttggaccgtcatcgattggaagactggacggccgccg
caggggaaagctctcgagatcgcggctctacagctggcaatatatcggttggcctggtcc
gaccggctgcaagaaatggggctcgatatctcaccgactcaaatcagcgcagggtttttc
tacgtcggagcagggaagaccctgatgccggatgaagcgctgttgccaagcaggatagag
ttagacaggaaaatgaaggagctcctgagttag
DBGET
integrated database retrieval system
