Entry |
|
Name |
|
KO |
|
Organism |
clw Corynebacterium lactis
|
Pathway |
|
Brite |
KEGG Orthology (KO) [BR:clw00001]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
CLAC_10080
09124 Replication and repair
03420 Nucleotide excision repair
CLAC_10080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:clw03021]
CLAC_10080
03400 DNA repair and recombination proteins [BR:clw03400]
CLAC_10080
Enzymes [BR:clw01000]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
CLAC_10080
Transcription machinery [BR:clw03021]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
CLAC_10080
DNA repair and recombination proteins [BR:clw03400]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
CLAC_10080
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
2228406..2230121
|
AA seq |
571 aa
MGFGTGPLIVQSDKTVLLEVDNPEADAARAALAPFAELERAPEHVHTYRITPLALWNARA
AGHDAEQVVDVLERYSKFPVPQPLLIDVAETMDRYGRLSLTKHPAHGLILVSHDPAVLAE
VTKHKKIRPMLGEKIDADTWTVHPSERGRVKQELLKVGWPANDTAGYIDGEAHPISWVGQ
APSADPAPDGSWQLRDYQRMAADSFREGGSGVVVLPCGAGKTIVGAAAMVDAQRTTLILV
TNTVAGRQWRDELLKRTSLTEDEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYRALELFD
SRDWGLIIYDEVHLLPAPVFRMSADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAP
WKDIEAQGWIAPADCVEVRVTPTEAERMVYATAEAADRYRLAATTPTKIPVVKQILSLHD
GEPALVIGAYLDQLEELGEQLGAPVVDGKTSNAKREELFGQFRRGELTTLVVSKVANFSI
DLPEASVAVQVSGTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVTRDTLDTEYAAHRQRF
LAEQGYAYRIVDADEYLGPSLPGDATGPTDK |
NT seq |
1716 nt +upstreamnt +downstreamnt
atgggtttcggcactggtcctctaattgtgcaatcggacaagacggtcctgcttgaggtg
gacaatcccgaggcggacgccgcccgcgctgcgcttgccccctttgctgagctggagcgc
gcacctgagcacgtgcacacttaccgtattacgcccttggccctgtggaatgcgcgcgca
gccggacacgatgccgagcaagttgtcgatgtcctggagcgttactcaaagttccccgtg
cctcagcctctgcttattgacgtcgcagagaccatggatcgctacggccgactgagcctt
acgaaacacccggcccacgggctaatccttgtctcccacgatccggcggtcctcgccgag
gtcacgaagcacaagaagattcgcccgatgctgggcgagaaaattgatgccgacacctgg
accgtgcacccctcggagcgcggtcgtgtgaagcaggaactgctgaaggtcgggtggcct
gccaacgacaccgccggctatatcgacggtgaagctcatccgatttcctgggtggggcag
gctccctctgcagaccctgcaccggacggatcctggcagctgcgcgactaccagcgcatg
gccgccgattccttccgcgagggaggttcgggagttgtagtcctgccctgtggcgcagga
aaaaccatcgtcggtgccgcggctatggtggacgcgcagcgcacgactctaatcctggtc
actaacaccgttgccggccgccagtggcgagacgagctgctcaaacgtacctcgcttacc
gaagatgaaatcggcgagtactccggtgagaagaaggaaatccgccccgtcactatcgcc
acctaccaggtcgtcacccgcaagactaagggtgagtaccgagctctcgagctgttcgac
tcccgcgactggggtctcatcatctacgacgaggtccatctcctacccgccccggttttc
cgcatgagcgccgacctgcagtctcgcaggcgcctgggcctgaccgccactctcgtccgc
gaggatggccgagaaggagacgtcttcagcctgattggtccgaagcgctatgacgcgcca
tggaaagacatcgaggcccagggctggatcgcccccgccgactgcgtagaagtccgcgtc
acccccacagaagccgaacgcatggtctacgccaccgcagaggcagcggaccgctacagg
ctcgccgcaacgactccaaccaagatccccgtcgtaaagcagatcctttcgcttcacgac
ggcgaaccggcgctagttatcggagcgtacctggaccagctggaagaactcggagagcaa
ctcggcgcacccgtcgtcgacggcaagacttctaatgcgaagcgagaggagctgttcggc
caattccgccgaggcgagctgacaacattagttgtatccaaagttgcgaacttctccatc
gaccttccggaggcatccgtcgcggtacaggtttcgggaaccttcgggtcccggcaggaa
gaggcacagcgacttggccggctactgcgcccgaaagctgacggaggcggcgcagtgttc
tactccgtggtgacccgcgatacccttgacactgagtacgcggcgcacaggcagcgtttt
ctcgccgagcagggctacgcgtacaggattgtggacgccgacgaatacctaggcccttcc
cttcctggcgacgcaaccggaccgactgacaaatag |