KEGG   Corynebacterium lactis: CLAC_10080
Entry
CLAC_10080        CDS       T04042                                 
Name
(GenBank) helicase
  KO
K10843  DNA excision repair protein ERCC-3 [EC:5.6.2.4]
Organism
clw  Corynebacterium lactis
Pathway
clw03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:clw00001]
 09120 Genetic Information Processing
  09121 Transcription
   03022 Basal transcription factors
    CLAC_10080
  09124 Replication and repair
   03420 Nucleotide excision repair
    CLAC_10080
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clw03021]
    CLAC_10080
   03400 DNA repair and recombination proteins [BR:clw03400]
    CLAC_10080
Enzymes [BR:clw01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     CLAC_10080
Transcription machinery [BR:clw03021]
 Eukaryotic type
  RNA polymerase II system
   Basal transcription factors
    TFIIH
     CLAC_10080
DNA repair and recombination proteins [BR:clw03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TFIIH complex
     CLAC_10080
SSDB
Motif
Pfam: Helicase_C_3 ERCC3_RAD25_C ResIII Helicase_C DEAD DUF7108
Other DBs
NCBI-ProteinID: ALA67965
UniProt: A0A0K2H1P2
LinkDB
Position
2228406..2230121
AA seq 571 aa
MGFGTGPLIVQSDKTVLLEVDNPEADAARAALAPFAELERAPEHVHTYRITPLALWNARA
AGHDAEQVVDVLERYSKFPVPQPLLIDVAETMDRYGRLSLTKHPAHGLILVSHDPAVLAE
VTKHKKIRPMLGEKIDADTWTVHPSERGRVKQELLKVGWPANDTAGYIDGEAHPISWVGQ
APSADPAPDGSWQLRDYQRMAADSFREGGSGVVVLPCGAGKTIVGAAAMVDAQRTTLILV
TNTVAGRQWRDELLKRTSLTEDEIGEYSGEKKEIRPVTIATYQVVTRKTKGEYRALELFD
SRDWGLIIYDEVHLLPAPVFRMSADLQSRRRLGLTATLVREDGREGDVFSLIGPKRYDAP
WKDIEAQGWIAPADCVEVRVTPTEAERMVYATAEAADRYRLAATTPTKIPVVKQILSLHD
GEPALVIGAYLDQLEELGEQLGAPVVDGKTSNAKREELFGQFRRGELTTLVVSKVANFSI
DLPEASVAVQVSGTFGSRQEEAQRLGRLLRPKADGGGAVFYSVVTRDTLDTEYAAHRQRF
LAEQGYAYRIVDADEYLGPSLPGDATGPTDK
NT seq 1716 nt   +upstreamnt  +downstreamnt
atgggtttcggcactggtcctctaattgtgcaatcggacaagacggtcctgcttgaggtg
gacaatcccgaggcggacgccgcccgcgctgcgcttgccccctttgctgagctggagcgc
gcacctgagcacgtgcacacttaccgtattacgcccttggccctgtggaatgcgcgcgca
gccggacacgatgccgagcaagttgtcgatgtcctggagcgttactcaaagttccccgtg
cctcagcctctgcttattgacgtcgcagagaccatggatcgctacggccgactgagcctt
acgaaacacccggcccacgggctaatccttgtctcccacgatccggcggtcctcgccgag
gtcacgaagcacaagaagattcgcccgatgctgggcgagaaaattgatgccgacacctgg
accgtgcacccctcggagcgcggtcgtgtgaagcaggaactgctgaaggtcgggtggcct
gccaacgacaccgccggctatatcgacggtgaagctcatccgatttcctgggtggggcag
gctccctctgcagaccctgcaccggacggatcctggcagctgcgcgactaccagcgcatg
gccgccgattccttccgcgagggaggttcgggagttgtagtcctgccctgtggcgcagga
aaaaccatcgtcggtgccgcggctatggtggacgcgcagcgcacgactctaatcctggtc
actaacaccgttgccggccgccagtggcgagacgagctgctcaaacgtacctcgcttacc
gaagatgaaatcggcgagtactccggtgagaagaaggaaatccgccccgtcactatcgcc
acctaccaggtcgtcacccgcaagactaagggtgagtaccgagctctcgagctgttcgac
tcccgcgactggggtctcatcatctacgacgaggtccatctcctacccgccccggttttc
cgcatgagcgccgacctgcagtctcgcaggcgcctgggcctgaccgccactctcgtccgc
gaggatggccgagaaggagacgtcttcagcctgattggtccgaagcgctatgacgcgcca
tggaaagacatcgaggcccagggctggatcgcccccgccgactgcgtagaagtccgcgtc
acccccacagaagccgaacgcatggtctacgccaccgcagaggcagcggaccgctacagg
ctcgccgcaacgactccaaccaagatccccgtcgtaaagcagatcctttcgcttcacgac
ggcgaaccggcgctagttatcggagcgtacctggaccagctggaagaactcggagagcaa
ctcggcgcacccgtcgtcgacggcaagacttctaatgcgaagcgagaggagctgttcggc
caattccgccgaggcgagctgacaacattagttgtatccaaagttgcgaacttctccatc
gaccttccggaggcatccgtcgcggtacaggtttcgggaaccttcgggtcccggcaggaa
gaggcacagcgacttggccggctactgcgcccgaaagctgacggaggcggcgcagtgttc
tactccgtggtgacccgcgatacccttgacactgagtacgcggcgcacaggcagcgtttt
ctcgccgagcagggctacgcgtacaggattgtggacgccgacgaatacctaggcccttcc
cttcctggcgacgcaaccggaccgactgacaaatag

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