Campylobacter lanienae: CLAN_0608
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Entry
CLAN_0608 CDS
T05075
Symbol
pnp
Name
(GenBank) polynucleotide phosphorylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
clx
Campylobacter lanienae
Pathway
clx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAN_0608 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clx03019
]
CLAN_0608 (pnp)
03016 Transfer RNA biogenesis [BR:
clx03016
]
CLAN_0608 (pnp)
Enzymes [BR:
clx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
CLAN_0608 (pnp)
Messenger RNA biogenesis [BR:
clx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLAN_0608 (pnp)
Transfer RNA biogenesis [BR:
clx03016
]
Prokaryotic type
tRNA degradation factors
CLAN_0608 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
PNPase
KH_1
S1
S1_2
Motif
Other DBs
NCBI-ProteinID:
ARQ97356
UniProt:
A0A1X9SM90
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All DBs
Position
601433..603613
Genome browser
AA seq
726 aa
AA seq
DB search
MQCSIEVNNQIQIFDLNKVAKQASGAVLLRVKNTVVLATIAKEDKQVEEDFLPLTVQYLE
KQYAAGKIPGGYVKRETKPGEFETLTSRIIDRSLRPLFPKGYAYPTQIVVMVLSADPEVD
LQVVGLNAASVALYLSDIPVERPVCGVRVGHIDGEFVLNPSNSELKKSTLDLYVAGVKDE
LLMIEMRSLPTMMSDLAPMMIVDPVVDMGLCSDFIQKQSMNEFGEDKMLEAIKFANEAII
NGSNAYEEAFKDYKKPAANLEYKSEIENNDIAIYIDEFYKAEVKSAINQMAKSERASELS
KIADKIASSDTAISESWDREIILNILGKYKKKIVREQIINESLRADGRGLKDVRPISIET
NILPNAHGSCLFTRGQTQALVVATLGTDSDAQMSEILTEKGVVAEKFMFNYNFPGFSVGE
ASPIKAPGRRELGHGNLAKRALYPSIDLDSPYSIRLVSEILESNGSSSMASVCGGSLALR
AAGIQSSKLVAGVAMGLVFEGDKHAVLTDIMGLEDHDGDMDFKVAGSKDGITALQMDIKL
GGISYEVLQEALLQAKEAREHILAIMEKASDDIVINEEILPKLELFSVDPSKIVDIIGQA
GKTIKEIIEKFDVSIDLDREKGEVKVAGAQKGRVEAAKEYIIQITQKDQKIKSGKKDSKS
IDNFKLGEEFNGEVKKIATFGAFVSLRDGVDGLLHISKIKSPIKEGEFLNVKISEIKAGK
ISLDLV
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgcagtgtagcatagaggtaaataatcaaattcaaattttcgatctaaacaaggtcgct
aaacaagctagcggagcagtgcttttaagagtgaaaaataccgtagtattagctacaata
gccaaagaagataagcaagttgaagaagattttttgcctttgactgttcaatatcttgag
aagcaatacgcagccggcaaaatcccaggcggatatgtcaagcgtgagaccaagccagga
gaatttgagactcttacaagtcgtataatagatagaagccttcgcccattatttccaaaa
ggctacgcatatcctacgcaaatagtagttatggtattaagtgcagatccagaggtggat
ttacaagttgttgggttaaatgcagctagtgtggctctgtatttgagtgatataccagtt
gagcgtccagtttgtggggtgagagttgggcatattgatggtgagtttgtcttaaatcct
agcaattctgaattgaaaaaatcaacccttgatctatatgtagctggtgttaaagatgag
cttttaatgatagagatgagaagtttgccaactatgatgagcgatctagcacctatgatg
atagtagatccagtggtggatatggggctttgtagtgattttattcaaaagcaatctatg
aatgaatttggcgaagataagatgcttgaagcgattaaatttgctaatgaagctatcata
aatggctctaatgcctatgaagaggcctttaaagattataaaaaaccagcagcaaattta
gagtataaaagcgagatagaaaataacgatatcgcaatttatatagatgagttttataaa
gctgaggttaaaagtgctataaatcagatggcaaaaagcgaaagagccagtgagttaagt
aaaatcgctgacaaaatcgcatctagtgataccgcgataagcgagtcttgggatagggag
attatcttaaatatcttaggaaaatataagaaaaagattgtaagagagcagataatcaat
gaaagccttagagctgatggcagaggcttaaaagatgtaaggcctattagcattgagaca
aatatattaccaaatgctcatggtagctgtctatttacaagagggcagactcaagcctta
gtcgtagctaccttagggactgatagtgacgcacaaatgagtgagatattaacagaaaag
ggcgttgtagcagagaaatttatgtttaattataattttccaggatttagtgtaggggag
gctagccctattaaagcaccaggtagaagagagttagggcatggaaatttagccaaaaga
gccttatatccaagcatagatctagatagcccatactctattagattagttagtgaaatt
ttagaaagtaatggctcaagctctatggctagtgtgtgtggtggctctttggcgcttagg
gctgcgggaattcaaagttctaaattagtagccggtgtggctatggggctagtatttgaa
ggcgataaacacgcagtattaactgatattatgggcttagaagatcatgatggcgatatg
gattttaaagttgcaggtagcaaagatggtataactgcacttcaaatggatatcaagctt
ggtgggattagctatgaggtgttacaagaagcactcttacaagccaaagaggctagagag
catatcttagccattatggaaaaagccagtgatgatatagttataaatgaagaaatattg
ccaaaattagaactatttagcgtagatccatcaaaaatagttgatataataggtcaagct
ggtaagactattaaagagataattgagaaatttgatgtaagcatcgacttagatagagaa
aaaggtgaagtcaaagtcgcaggagcacaaaaaggcagagtagaagctgctaaagagtat
ataatccaaatcacccaaaaagaccaaaaaatcaaaagcggcaaaaaagatagcaaaagt
atagataacttcaagctaggagaggaattcaatggagaggttaaaaagatagctacattt
ggtgcttttgtatcgctaagagatggcgtagatggacttttacatatctcaaagatcaaa
tctcctatcaaagaaggggagtttttgaatgtaaaaataagcgagataaaagctggtaaa
atttcactagatttagtttaa
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