KEGG   Campylobacter lanienae: CLAN_1250
Entry
CLAN_1250         CDS       T05075                                 
Symbol
fliA
Name
(GenBank) RNA polymerase sigma28 factor
  KO
K02405  RNA polymerase sigma factor FliA
Organism
clx  Campylobacter lanienae
Pathway
clx02020  Two-component system
clx02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:clx00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    CLAN_1250 (fliA)
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    CLAN_1250 (fliA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:clx03021]
    CLAN_1250 (fliA)
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:clx02035]
    CLAN_1250 (fliA)
Transcription machinery [BR:clx03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     CLAN_1250 (fliA)
Bacterial motility proteins [BR:clx02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    CLAN_1250 (fliA)
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r4_2 Sigma70_r3 HTH_23 UPF0122 IF-2B HTH_24 Sds3 DUF4080 MarR GerE HTH_WhiA MarR_2 Lentiviral_Tat
Other DBs
NCBI-ProteinID: ARQ97974
UniProt: A0A1X9SP04
LinkDB
Position
complement(1230408..1231112)
AA seq 234 aa
MNYAKQKQLDIYKSQIKKEQDDLVIAYMPALKAMAYRLKSRLPSSVEVSDLISVGSEAMV
RLSHSYDKSQNDNFWGYVKQRVYGSMLDYLRTLDNISRNSRKLVKDIDRLVDEYYNKHQS
EPSDEYLAKTLNEDISKIKEARNLSDIASVLRLEDQYELLSEYNTEAQIEKDELIEHIKL
ILNEFSERDQMIIQLYYYEELSLKEISEILNITESRISQIHKRLITKIRERLGF
NT seq 705 nt   +upstreamnt  +downstreamnt
atgaactacgcaaagcaaaagcagcttgatatatataaatctcaaattaaaaaagagcaa
gatgatttagtaattgcctatatgccagctctaaaggctatggcttatagacttaaatcc
cgtttgcctagctcggtggaagttagcgatctaatcagcgtagggagcgaagctatggta
aggctaagtcatagttatgacaagagtcaaaatgataatttttggggttatgtcaagcaa
agggtctatggctcgatgttagattaccttcgcactcttgataatataagtagaaatagc
cgtaaattagtcaaagatatagatcgcttagtagatgaatactataataaacatcaaagc
gaaccaagcgatgaatatctcgctaaaaccttaaatgaagatataagcaagatcaaagag
gctaggaatttaagcgatatagcatctgttttgcgtttagaagatcaatatgagttatta
agtgagtataatacagaagcacagatagaaaaagatgagctaatagagcatattaaattg
attttaaatgaatttagtgagcgtgaccagatgataatccagctatattattatgaagag
ttgagcttaaaagagataagtgaaattttaaatataacagagtctaggattagtcaaatt
cacaaaagacttataaccaaaattagagaaaggctaggcttttaa

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