Campylobacter lanienae: CLAN_1511
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Entry
CLAN_1511 CDS
T05075
Symbol
rho
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
clx
Campylobacter lanienae
Pathway
clx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAN_1511 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clx03021
]
CLAN_1511 (rho)
03019 Messenger RNA biogenesis [BR:
clx03019
]
CLAN_1511 (rho)
Transcription machinery [BR:
clx03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
CLAN_1511 (rho)
Messenger RNA biogenesis [BR:
clx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
CLAN_1511 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
AAA_22
AAA_25
ATPase_2
Ploopntkinase3
AAA
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
ARQ98226
UniProt:
A0A1X9SPN9
LinkDB
All DBs
Position
1477069..1478385
Genome browser
AA seq
438 aa
AA seq
DB search
MESKETTQQTKKQHTRTHTPVDGYKIEELRLQDLDSLVAIAEEVGVQNPREFRRQELVFE
ILKAQTKQGGFILFTGILEIVEGGYGFLRSTDANLSDSANDTYVSLSQIKKFALRVGDII
TGQVREPREQEKYYALLKIEAINYKSIAEAKERPLFDNLTPLFPNQKIQLEYDPMKLTGR
VLDLFTPIGKGQRGLIVAPPRTGKTELMKELAHGITRNHPEVELIVLLIDERPEEVTDMQ
RSVRGEVFSSTFDLPASNHVRVAELVIEKAKRLVEMGKDVVILLDSITRLARAYNTVTPS
SGKVLSGGVDANALHKPKRFFGAARNIENGGSLTIVATALIDTGSRMDDVIFEEFKGTGN
SEIILDRTISDRRIYPAVNILKSGTRKDELLQGSDDLGKIWAIRNIIATMDDIEALKFLY
SKMLKTKNNKELLSIMNE
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atggaaagcaaggaaaccacccaacaaaccaaaaaacaacacacacgcacacacacgcca
gttgatggctacaaaatagaagagttaagactccaagacctagatagcttagtagcaatc
gccgaagaagtaggcgtccaaaaccctagagaatttcgccgccaagagctagtatttgaa
attctaaaagctcaaaccaaacaaggcggatttatcttatttactggaattttagagata
gttgagggcggatatggctttttacgctctactgatgcgaatttgagcgattctgctaat
gatacatatgttagcttaagccagattaaaaaattcgccctaagagtcggtgatatcata
acaggacaagtaagagagccaagagaacaagagaaatattacgctcttttaaagatagaa
gcgataaattataaatccatagccgaagctaaagagcgcccactatttgataacctaact
ccgctatttccaaatcaaaaaattcaattagaatatgatccaatgaagcttacaggtcgt
gtgcttgatcttttcaccccgataggcaaggggcaaagggggcttatagttgccccacct
agaacaggtaaaactgagcttatgaaagagcttgctcacggcattacaagaaatcaccca
gaagttgagctaatagtgcttttaatagatgagaggccagaagaggttacagatatgcaa
cgcagtgtgcgtggtgaggtatttagctctacatttgacttaccagcatcaaatcatgta
agggtggctgaattggtgatagaaaaggccaaaagactagtagagatgggaaaagatgtt
gtgatattgcttgatagcattactcgccttgctagagcgtataacacagtaactccaagt
agcggtaaggttttaagcggtggcgtggatgccaatgcccttcataaaccaaagagattt
tttggtgcagctagaaatatagaaaatggcggaagtctaacgatagtagcgaccgctttg
atcgatacaggttctagaatggatgatgtgatatttgaagagtttaaagggacgggtaat
agcgaaattatcttagatcgcaccatttcagatcgtagaatttatccagctgtaaatata
ctcaaatccggcactagaaaagatgaattactacaaggtagtgatgatttaggcaaaatt
tgggctatacgaaatattatagctactatggatgatatagaggctcttaaattcctatac
tctaaaatgttaaaaaccaaaaacaataaagagcttttaagcataatgaacgaataa
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