Campylobacter lanienae: CLAN_1548
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Entry
CLAN_1548 CDS
T05075
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase, alpha subunit
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
clx
Campylobacter lanienae
Pathway
clx03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
clx00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
CLAN_1548 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
clx03021
]
CLAN_1548 (rpoA)
03400 DNA repair and recombination proteins [BR:
clx03400
]
CLAN_1548 (rpoA)
Enzymes [BR:
clx01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
CLAN_1548 (rpoA)
Transcription machinery [BR:
clx03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
CLAN_1548 (rpoA)
DNA repair and recombination proteins [BR:
clx03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
CLAN_1548 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
ARQ98258
UniProt:
A0A1X9SPX1
LinkDB
All DBs
Position
complement(1516264..1517262)
Genome browser
AA seq
332 aa
AA seq
DB search
MRKITTSAYMPTDIEVTPISENVAKIVAYPFETGYAVTLAHPLRRLLYTSTVGFAPTAVK
IEGVSHEFDSMRGMLEDVTLFIINLKNLRFKLKNDSEHEVIEYSFKGPKEITGADLSNNI
VEIVNPDAYLATINEDAELNFSLIIEKGIGYVPSEEIRESVESGYIALDAFFTPVKHAVY
EIENVLVEDNPDYEKIVLTITTDGQVTPLEAFKNSIEAMYKQMSIFNNILNIDVNMAMTS
SQGSSEHSKLLESIENLNLSARSFNCLDKAEIKFIGELALMEESDLKELKNLGKKSLDEI
KAVMAEIGYPFGENKLGDSKESLRKKIAELKS
NT seq
999 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagataacaacatcagcttacatgcctactgacatagaggttaccccaataagt
gaaaatgtggctaaaatagtagcgtatccttttgagaccggctatgcagttactctagct
catccgcttcgcagactactctatacaagcacggttggatttgctccaactgctgtaaaa
atagaaggcgtgtctcacgaatttgatagtatgcgtggtatgctagaagatgtaacgcta
tttatcataaatctcaaaaatttacgatttaagctcaaaaatgactcagagcatgaggtt
atcgaatatagctttaaagggccaaaagagattacaggtgcagatctatctaataatata
gtagagatagtaaatcctgatgcgtatctagctacaattaacgaagacgcagagctaaat
ttctctctaataatagaaaaaggaattggctatgtgcctagcgaagagattagagagagt
gtagagagtggctatatcgctcttgatgctttctttacacctgttaaacatgcagtttat
gagattgaaaatgtgttagttgaagataatccagactacgaaaaaatagtcctaactata
actacagatggtcaggtaacgcctttagaagcatttaaaaactcaattgaagctatgtat
aaacagatgtctatatttaacaatattttaaatatagatgtaaatatggctatgacttca
tctcaaggctctagtgagcattcaaaacttttagagagtattgagaatttaaatttatca
gctagaagtttcaattgtctagataaagctgagattaaattcattggtgagcttgcttta
atggaagagagtgacctaaaagagcttaaaaatttaggcaaaaaatctcttgatgagatt
aaagctgtaatggctgaaataggctatccatttggtgaaaataagctaggagatagcaaa
gaatcactcagaaaaaaaatagctgagttaaaatcataa
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