Campylobacter lanienae: CLAN_1631
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Entry
CLAN_1631 CDS
T05075
Name
(GenBank) mRNA degradation ribonuclease J1/J2 (metallo-beta-lactamase superfamily)
KO
K12574
ribonuclease J [EC:3.1.-.-]
Organism
clx
Campylobacter lanienae
Pathway
clx03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
clx00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
CLAN_1631
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
clx03019
]
CLAN_1631
Messenger RNA biogenesis [BR:
clx03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
CLAN_1631
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_J_b_CASP
RNase_J_C
Lactamase_B
RMMBL
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B_6
LPD7
RALGAPB_N
Motif
Other DBs
NCBI-ProteinID:
ARQ98338
UniProt:
A0A1X9SQ46
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Position
complement(1583844..1585805)
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AA seq
653 aa
AA seq
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MNEEKNQSEKPSKKRRYRNHKDNLKKEAKHAVVDQNSQIDETTKTDESKEQTKKAKKRRK
NSNPTVKISGNEEWQKDMKAAIEANKASHELRLEPLKYLNSAEHKITITPLGGLGEIGGN
MTIFETNNDAIIIDIGMSFPTESMHGVDILVPDFDYVRKIKDKIRGIIITHAHEDHIGAV
PYFFKEFQFPIYATPLPLGMISNKFEEHGLKSYRSYFRPIEKRKVYELGEFEFELIHITH
SIIDASALAITTKAGTIIHTGDFKIDHTPIDGYPTDLNRLAYYGERGVLCLLSDSTNSYK
DGITKSESSVGKTFDSIFATAKGRVIMSTFSSNIHRVYQAIERGIKYGRKVCVIGRSMER
NLWTAIELGYVNLDRKIFIDANEVVKYPDNEVLIVTTGSQGETMSALYRMATDEHKYIKI
KPSDQVIISSKAIPGNETSVSTILNFLLKSGASVAHQDFSEIHVSGHAAQEEQKLMLRLI
KPKFFLPVHGEYNHIVKHKETAMSCGIDERNIYLMSDGDQVEVCQRHIKRVKTVKTGKVF
IDNQINKQIADDVVIDRQKLAEAGVITIISQIDKNAKRLIHNRVISYGLVSEKQTRNLSK
ELEEILLQFLTNIKDELLNDQKALENQIRQVIRKHIFRKLKKYPTIVPVVYLM
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagagaaaaatcaaagcgaaaaacctagcaaaaaaagaagatatcgcaatcat
aaagataatctaaaaaaagaggcgaaacacgcagttgtggatcaaaattcacaaattgat
gaaaccactaaaactgacgagtcaaaagagcaaaccaaaaaagctaaaaagcgccgcaaa
aatagcaatccaacagtaaaaatcagtggcaacgaagagtggcaaaaagatatgaaagcc
gccatagaagcaaataaggctagtcatgagttgcgtcttgagcctttgaaatatctaaat
tcagccgagcataaaatcaccataactccgcttggagggcttggtgaaatcggcggaaat
atgactatttttgagacaaataacgatgcgattatcattgatatcggtatgagttttcct
actgagagtatgcatggcgtggatattttggtgccagattttgactatgttagaaagatc
aaagacaaaatcagaggcattatcatcactcacgcacacgaagatcatatcggtgcggtg
ccatattttttcaaagaatttcaattcccaatttatgctacgccacttccattggggatg
ataagcaataaatttgaagagcatggattaaaatcttatagaagctactttcgcccgatt
gaaaagcgcaaggtctatgagcttggggaatttgaatttgagcttatacatatcactcac
tctataatcgatgctagtgcgttagccataactacaaaggctggaactataatccacact
ggcgatttcaagatcgatcacaccccaatcgatggctatccaacggatttaaatcgctta
gcatattatggcgaaaggggcgttttgtgcttattaagcgactctacaaacagctacaaa
gatggaattacaaagagtgaaagtagcgttggaaagacctttgattctatatttgctacc
gctaagggcagggtgataatgagtacatttagctcaaatattcatagagtttatcaagct
atcgagcgtggtataaaatatggccgtaaagtctgcgtgataggcagaagtatggagaga
aatctatggacggctatcgagcttggatatgtgaatttagatcgcaagatttttatcgat
gcaaatgaagttgtcaaatatccagataatgaggttttaatagtcacaacaggcagtcaa
ggtgagacaatgagcgctctatataggatggcaactgatgagcataaatatatcaaaatc
aagccaagtgatcaagtaatcatcagttccaaagcaattcctggcaatgaaactagcgta
tcaacgattttgaatttcttattaaaaagtggagcaagtgtagctcatcaagattttagc
gaaattcatgtaagcggacacgcagcccaagaggagcaaaagcttatgctaaggctgatt
aaacctaaatttttccttccagttcatggcgagtataatcacatagtcaaacacaaagag
acagcgatgagctgtgggattgatgagagaaatatatatttgatgagcgatggagatcaa
gttgaggtttgccaacgccatatcaaaagagtaaaaacagttaaaactggtaaggtattt
atagataatcagataaacaaacagatcgccgatgatgtcgtaatcgatcgccaaaaactt
gccgaagcgggagttataacaataatctcacaaattgacaaaaacgcaaaaaggctaata
cacaatagagttataagctatggcttagtgagcgaaaaacagacaagaaatttaagcaaa
gagcttgaagagatactacttcaatttttaacaaatataaaagatgagctactaaacgat
caaaaagctctagaaaatcaaattcgccaagttatcagaaagcatatatttagaaaactc
aaaaaatatccaacaatcgtaccggttgtatatttaatgtga
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