Cellulophaga lytica DSM 7489: Celly_0030
Help
Entry
Celly_0030 CDS
T01434
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
cly
Cellulophaga lytica DSM 7489
Pathway
cly03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
cly00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Celly_0030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
cly03019
]
Celly_0030
03400 DNA repair and recombination proteins [BR:
cly03400
]
Celly_0030
Enzymes [BR:
cly01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Celly_0030
Messenger RNA biogenesis [BR:
cly03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Celly_0030
DNA repair and recombination proteins [BR:
cly03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Celly_0030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
ADY27865
UniProt:
F0RFC3
LinkDB
All DBs
Position
complement(26829..29030)
Genome browser
AA seq
733 aa
AA seq
DB search
MSNSNIDLHASLKKHFGFTKFKGLQESVINNLLKGNNTFVIMPTGGGKSLCYQLPALMQE
GTAIVVSPLIALMKNQVDAIRGISSEHGIAHVLNSSLTKTQVKEVKEDIVNGVTKLLYVA
PESLIKEEYVEFLRSVKISFVAVDEAHCISEWGHDFRPEYRNLKTIVGKLGDNIPMIGLT
ATATPKVQEDIVKNLGIADAKLFKASFNRPNLFYEVRPKTQNIEADIIRFVKQNVGKSGI
VYCLSRKKVEELAQVLQVNGISAVPYHAGFDAKTRSRYQDMFLMEEVDVVVATIAFGMGI
DKPDVRFVIHHDIPKSLESYYQETGRAGRDGGEGHCLAFYSYKDIEKLEKFMSGKPVAEQ
EIGNALLQEVVAFAETSMSRRKFILHYFGEEFDEVNGEGADMDDNTRTPKEKVEAKENVV
KLISVVQGTKEKFKSKEIVNTLIGKKNALITSHKTNEKPFFGIGKDKDAGYWMALIRQTL
VAGYLRKEIEQYGILRVTPMGVDYAKEPKSFLMTKDHVYSQANDDAIVSAAKSSGGVADK
ELAQLLRQLRKSEAKKHGVPPFVVFQDPSIDDMALKYPTSMEDMLNIHGVGEGKAKKYGK
PFLALIAKYVEDNDIVRPDDLVVKSTGANSALKLYIIQNVDRKLPLTDIADAKGLELAEL
IKEMEQIVYSGTKLNITYWVDETLDEDQQEEIHDYFLEAESDNIDAAVEEFDGDYEDEEL
RLYRIKFISEVAN
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgagtaactctaacattgatttgcacgcttccttaaaaaaacattttggattcacaaaa
tttaaaggattacaagagagtgtcatcaataacttgcttaagggtaataatacgtttgtt
ataatgccaactggcggaggcaaatcgctttgctatcagttaccagcgttaatgcaagaa
ggtacagctattgttgtttctcctctaatagctttgatgaaaaatcaggtagatgccata
cgtggtatctcttctgaacacggaattgcacacgttttaaattcttctttaactaaaact
caagtaaaagaggtgaaagaagatattgtaaacggtgtaactaaattattgtatgtagct
cctgagtctcttataaaagaagagtatgtggagtttttaagatctgtaaaaatatctttt
gtagcggtagatgaagcccattgtatatctgagtggggacatgattttagaccagaatat
agaaatttaaaaaccattgttggtaagctaggagacaatatacctatgataggtttaacg
gcaacagctacaccaaaggtgcaagaagatattgtaaaaaatttagggattgcagatgct
aaactatttaaagcatcatttaacaggcctaatttattttatgaagtacgaccaaaaact
cagaatatagaagcagatataatacgttttgtaaagcaaaacgtaggtaaatctggaatt
gtatactgcttaagtcgtaaaaaagttgaagaattagcacaggtattacaagttaatggt
attagtgctgtgccttatcacgctggttttgatgcaaaaacaaggtctcgttatcaagat
atgtttttaatggaagaggtagatgttgtggttgcaacaattgcctttggtatgggtata
gataagccagatgtgcgttttgtaatacatcatgatatacctaaaagtttagaaagctat
taccaagaaactggtagggcaggtagagatggaggagaaggacattgtttggctttttat
tcttataaagacatagaaaagctagagaaatttatgtctgggaaacccgttgcagaacaa
gaaattggaaatgcattgctgcaagaagttgttgcttttgcagaaacatctatgtctcgt
agaaaatttattcttcattattttggagaggaatttgacgaggttaatggagaaggagca
gatatggatgataacacccgtactcctaaagaaaaagtagaagctaaagaaaatgtagtt
aagcttattagtgtggtacaaggcactaaagaaaaatttaaatctaaggaaatagtaaat
accttaattggtaaaaaaaatgcactaataacttcgcataaaaccaatgaaaaaccattt
tttggtatagggaaagataaagatgctggttattggatggctttaattcgccaaacttta
gttgctggttatttacgtaaagaaatagaacagtacggaattttacgtgttacaccaatg
ggtgttgattatgccaaggagccaaaatcatttttaatgacaaaagatcatgtgtatagc
caagcaaatgatgatgctattgtgagtgcagcaaaaagttctggtggtgtagcagataaa
gagcttgcacagttgttaaggcaacttagaaagtctgaagctaaaaagcacggtgtacct
ccttttgtagtttttcaagatccgtctatagatgacatggcgcttaagtacccaaccagt
atggaagatatgcttaacatacatggagtaggagaaggtaaagctaaaaaatacggaaaa
ccatttttagcacttatagccaagtatgtagaggataatgatattgttagaccagatgat
ttggtggttaaaagtacaggagctaattctgctttaaaactgtacataatacaaaacgta
gatcgtaaattaccattaacagatattgcagatgctaaaggtttagagttagcagagttg
ataaaagaaatggaacaaatagtatatagtggtacaaagctaaatattacttattgggta
gatgaaactttagatgaagaccaacaagaagaaatacacgattactttttagaggcagaa
tctgataatattgatgctgctgtagaagagtttgatggtgactatgaagatgaagagcta
cgtttatatagaataaaatttattagtgaagtagcaaactag
DBGET
integrated database retrieval system
