Cellulophaga lytica DSM 7489: Celly_0486
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Entry
Celly_0486 CDS
T01434
Name
(GenBank) Exonuclease RNase T and DNA polymerase III
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
cly
Cellulophaga lytica DSM 7489
Pathway
cly03030
DNA replication
cly03430
Mismatch repair
cly03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
cly00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Celly_0486
03430 Mismatch repair
Celly_0486
03440 Homologous recombination
Celly_0486
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
cly03032
]
Celly_0486
03400 DNA repair and recombination proteins [BR:
cly03400
]
Celly_0486
Enzymes [BR:
cly01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Celly_0486
DNA replication proteins [BR:
cly03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
Celly_0486
DNA repair and recombination proteins [BR:
cly03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
Celly_0486
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
ExoX-like_C
RNase_H_2
DNA_pol_B_exo1
Motif
Other DBs
NCBI-ProteinID:
ADY28321
UniProt:
F0R9Z2
LinkDB
All DBs
Position
complement(528543..529319)
Genome browser
AA seq
258 aa
AA seq
DB search
MDLKLTRPICFFDLETTGINVAKDRVVEISILKVYPNGNKESKTWLVNPEMHIPDEVVAV
HGISNEKVANEPTFAQLSKEIYAMIKDCDLGGYNSDRFDIPLLAEEMLRAGVDFDMKNTV
SVDVQTIFFKMEKRTLEAAYKFYCNKELTNAHSAAADTNATFEVLKSQLDRYPELENDIK
KLSEFTTRKKFADFAGFIIIDQDGDPAFSFGKHKGKKVDEVLEKEPGYFGWILNADFPLY
TKKVLTQIKLSKLNNKLS
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atggatttaaaattaacacgcccaatttgtttttttgacttagaaacaacaggtataaac
gtggctaaagatagagtggtagagatttccattttaaaagtataccctaacggaaataaa
gaaagtaaaacttggctagtaaacccagaaatgcatataccagatgaggttgttgcagtg
catggtattagcaatgagaaagttgcaaatgaacctacttttgcacaattatctaaagaa
atttacgcaatgattaaggattgtgacctaggaggttacaattcagataggtttgatatt
ccacttttagctgaggaaatgttacgtgcaggagtagattttgatatgaaaaatacagta
tctgtagatgtgcaaactatcttttttaagatggagaaaagaactttagaggctgcttat
aaattttattgcaataaagagcttacaaatgctcacagtgctgccgcagatacaaatgca
acttttgaggtcttaaaatcacaattagaccgttatccagaattggaaaacgacattaaa
aaactatcagaatttaccactcgtaaaaagtttgcagattttgctggctttattataata
gatcaagatggtgacccagctttttcttttggtaagcataagggtaaaaaggtagatgaa
gttttagaaaaagaaccaggctattttgggtggattttaaatgcagattttccgttgtat
actaaaaaagtacttactcaaataaaacttagtaagttaaacaataagttaagttaa
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