Cellulophaga lytica DSM 7489: Celly_0516
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Entry
Celly_0516 CDS
T01434
Name
(GenBank) Collagen triple helix repeat-containing protein
KO
K19721
collagen type V/XI/XXIV/XXVII, alpha
Organism
cly
Cellulophaga lytica DSM 7489
Pathway
cly04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
cly00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
Celly_0516
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
cly00536
]
Celly_0516
Glycosaminoglycan binding proteins [BR:
cly00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
Celly_0516
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
ADY28351
UniProt:
F0RA22
LinkDB
All DBs
Position
complement(556441..561600)
Genome browser
AA seq
1719 aa
AA seq
DB search
MKKILLPMMLLISSIAFSQTTVTLEDQCNCEVLSGTDVTVAGMTSPAGADLGDVYVNTDT
GVIYFWDGNSWELTSTDDQQIQDFSFDSDTNTLTLQLENGGTSSVDLTSLHIVETLTTIM
ANTDGTFTYRDEDGVDTVIDIKDLETLTVAALNADNTNIDYTDEDGNTTQLDLTALVENL
ETLTTVVANTDGTFTYRDEDGVDTVIDIKDLETLTVAALNADNTNIDYTDEDGNTTQLDL
TALVENLETLTTVVANTDGTFTYRDEDGVDTVIDIKDLETLTVAALNADNTNIDYTDEDG
NTTQLDLTAIVENLETLTTVVANTDGTFTYRDEDGVDTVIDIKDLETLTVAALNADNTNI
DYTDEDGNTTQLDLTAIVENLETLTTVVANTDGTFTYRDEDGVDTVIDIKDLETLTVAAL
NADNTNIDYTDEDGNTTQLDLTAIVENLETLTTVVANTDGTFTYRDEDGVDTVIDIKDLE
TLTVAALNADNTNIDYTDEDGNTTQLDLTAIVENLETLTTVVANTDGTFTYRDEDGVDTV
IDIKDLETLTVAALNADNTNIDYTDEDGNTTQLDLTALVENLETLTTVVANTDGTFTYRD
EDGVDTVIDIKDLETLTVAALNADNTNIDYTDEDGNTTQLDLTAIVENLETLTTVVANTD
GTFTYRDEDGVDTVIDIKDLETLTVAALNADNTNIDYTDEDGNTTQLDLTAIVENLETLT
TVVANTDGTFTYRDEDGVDTVIDIKDLETLTNLVNNNDGTITYTNEDGTDQVIDLVSDQA
NNDIQVGADGGLYLNVASVTIDETVTTLVDNTDGTFTYTNEDGVTTTFDAKRSTVVDNGD
GTFTLTDDSGNSATVDTNNTITTLVDNGDGSFTYTSENGTITTFTETLSTLVDNTDGTFT
YTNEDGVTTTFDAKRSTVLDNGDGTFTLTDDSGNAATIDTNQVAGTLVNNNDGTITYTDG
TGSSQTIGLVSSDANNDIQVGTDGGLYLNVASVTIDETITSLTDNGDGTFTYENESGAAT
TFDSKRSTVLDNGDGTFTITDDSGNAATIDTNNTVTTLVNNGDGSFTYTSEDGTLTNFVG
TDSQDLSLTGDNLTLTNDPTATPIDLSNYRETVIGAGDINVTNDGSGNYTVAYTDGDNDN
QNEIELPTGGADGQVLSTDGAGVYTWVDPDSGPQGEKGDKGDQGDQGPQGIQGETGPQGI
QGETGATGAQGPQGEKGDQGDQGPQGIQGETGPQGIQGETGATGAQGPQGEKGDKGDQGD
QGPQGIQGETGPQGIQGETGATGAQGPQGEKGDQGDQGPQGIQGETGPQGIQGETGATGA
QGPQGEKGDKGDQGDQGPQGIQGIQGETGPQGIQGETGATGAQGPQGEKGDQGDQGPQGI
QGETGPQGIQGETGATGAQGPQGEKGDQGDQGPQGIQGIQGETGATGAQGPQGDKGDKGD
QGERGATGATGAQGPQGPQGQPGQNGQDGQKGDKGDKGDQGERGATGATGAQGPQGPAGQ
KGDPGDPASDDQTLSTNGNAGYVAISGGNNVTINVDDADSVIGNEYNTNFRVVGTNLRLT
DGGGNFNVPLSDLGSDDQYDDEVELRTPIDVDEGGEASPTAETNVQEVIQAIAPITSKAA
RIFYPPSVEVDVATNGTKTLDLYDEYIKQYGTPTIGSAGAPSALPTYTRTELYYYVTYAD
PTVFNTATMSINANGVLTYTVTNQPTDYNTLINVVFVVK
NT seq
5160 nt
NT seq
+upstream
nt +downstream
nt
atgaagaagattttactaccgatgatgcttttaatatcatcaattgcattctcacaaact
accgtgaccttagaagatcaatgtaattgtgaggttttaagcggtacagatgtcactgta
gcaggtatgaccagtcctgcaggagcagatttaggagatgtatatgtaaacacagatact
ggagtaatttacttttgggatggtaattcttgggagttgacatctactgatgatcagcaa
attcaagattttagtttcgattcagatacaaacacattgacacttcaattagaaaatggg
ggaacttctagtgttgatttgacgagcttacacatagttgaaacattgacaactataatg
gctaatactgatggtactttcacatacagagatgaagatggtgtagatacagttatcgat
attaaagacttagagacgttaacagtagcagctttaaatgctgataatacaaatattgat
tatacagatgaagatggaaacaccacacagttagacttaactgcattagtagaaaactta
gaaactttaactactgtagtagcaaatactgatggtactttcacatacagagatgaagat
ggtgtagatacagttatcgatattaaagacttagagacattaacagtagcagctttaaat
gcagataatacaaatatcgattatacagacgaagatggaaacaccacacagttagactta
actgcattagtagaaaacttagaaactttaactactgtagtagcaaatactgatggtact
ttcacatatagagatgaagatggtgtagatacggttattgatattaaagacttagagaca
ttaacagtagcagctttaaatgcagataatacaaatatcgattatacagacgaagatgga
aacaccacacagttagacttaacagctattgtagaaaacttagaaactttaactactgta
gtagcaaacactgatggtactttcacatacagagatgaagatggtgtagatacggttatt
gatattaaagacttagaaacgttaacagtagcagctttaaatgctgataatacaaatatt
gattatacagatgaagatggaaacaccacacagttagacttaacagctattgtagaaaac
ttagaaaccttaactactgtagtagcaaacactgatggtactttcacatacagagatgaa
gatggtgtagatacggttattgatattaaagacttagaaacgttaacagtagcagcttta
aatgctgataatacaaatattgattatacagatgaagatggaaacaccacacagttagac
ttaacagctattgtagaaaacttagaaactttaactactgtagtagcaaacactgatggt
actttcacgtatagagacgaagatggtgtagatacagttatcgatattaaagacttagag
acgttaacagtagcagctttaaatgcagataatacaaatatcgattatacagatgaagac
ggaaataccacacagttagacttaacagcgattgtagagaacttagaaactttaactact
gtagtagcaaatactgatggtactttcacgtatagagatgaagatggagtagatacggtt
attgatattaaagacttagagacattaacagtagcagctttaaatgcagataatacaaat
attgattatacagatgaagacggaaacaccacacagttagacttaactgcattagtagaa
aacttagaaactttaactactgtagtagcaaacactgatggtactttcacgtatagagat
gaagacggagtagatacagttatcgatattaaagacttagagacgttaacagtagcagct
ttaaatgcagataatacaaacatcgattatacagatgaggacggaaataccacacagtta
gacttaacagcgattgtagaaaacttagaaactttaactactgtagtagcaaacactgat
ggtactttcacatatagagacgaagatggtgtagatacagttatcgatattaaagactta
gagacgttaacagtagcagctttaaatgcagataatacaaatattgattatacagatgag
gacggaaataccacacagttagacttaacagcgattgtagaaaacttagaaactttaact
actgtagtagcaaacactgatggtactttcacgtatagagatgaagacggagtagataca
gttatcgatattaaagacttggagacgttaactaatctagttaataataatgacggtaca
attacatacacaaatgaggatggaacggatcaagttattgatttggttagtgatcaagct
aataatgatatccaagttggggcagatggtggattgtatttgaatgttgcatctgttaca
attgatgaaacagtaacaactttagtagataatacagacggaacatttacgtatacaaac
gaagatggtgtaaccactacatttgatgcaaagcgttctacagtagtagacaacggcgat
ggaacctttacattaacagatgactcaggaaattcagcaacagtagataccaacaatacc
ataactactttagtagataatggcgatggtagttttacgtacacatcagaaaatggtaca
ataactacatttacagagactttatcaactttagtagacaatacagatggtacatttacg
tatacaaacgaagatggagtaaccactacatttgatgcaaagcgttctacagtattagac
aacggtgatggaacctttacattaacagatgattctggtaatgctgcaactattgataca
aaccaggttgctggtactttagttaataacaatgatggtacaataacatatacagacggt
acaggttcttctcaaacaataggattagtaagttcagatgccaacaacgatattcaagtg
ggtacagatggtggtttatatttaaatgtagcatcagttacaattgacgaaactattacc
tctttaacagataatggagacggaacatttacttatgaaaacgagagcggagctgcaact
acatttgattcaaagcgttctactgttttagataatggagatggaacatttacaatcacg
gatgattctggtaatgctgcaactattgacacaaataatacagttacaacattagtaaat
aatggagatggtagctttacctacacatcagaggatggtactttaaccaattttgtaggt
acagacagtcaagatttatcattaactggagataacttaacgttaactaatgatccaaca
gctacaccaattgacttatcaaattacagagagacagttataggagcaggagatattaat
gtaactaatgatggttctggcaattacactgttgcatacacagacggagataatgacaat
caaaacgaaatagaattacctacaggaggtgcagacggacaagttttatcaactgatgga
gcaggagtatatacttgggtagatccagattctggtccacaaggagaaaaaggagataaa
ggcgatcagggagaccaaggacctcaaggtatccaaggagaaactggcccacaaggaatc
caaggtgagactggcgcaacaggagcgcaaggtccacaaggagaaaaaggagatcagggc
gaccaaggacctcaaggtatccaaggagaaactggcccacaaggaatccaaggtgagact
ggcgcaacaggcgcacaaggtccacaaggagaaaaaggagataaaggcgatcagggagac
caaggacctcaaggtatccaaggagaaactggcccacaaggaatacaaggtgagactggt
gcaacaggagcacagggtccacaaggagaaaaaggcgatcagggagaccaaggacctcaa
ggtatccaaggagaaactggcccacaaggaatccaaggtgagactggtgcaacaggagca
cagggtccacagggagaaaaaggagataaaggcgatcagggtgaccaaggacctcaagga
atacagggaatccaaggagaaactggtccacaaggaatccaaggtgagactggtgcaaca
ggtgctcaaggtccacaaggagaaaaaggagatcagggcgaccaaggacctcagggaatc
caaggagaaactggcccacaaggaatccaaggtgagactggtgcaacaggtgctcaaggt
ccacaaggagaaaaaggagatcagggagaccaaggacctcagggaatacagggaatccaa
ggtgagactggtgcaacaggtgcacagggtccacaaggagataaaggagataaaggagat
cagggtgaaagaggtgccactggagcaacaggagcacaaggtccgcagggacctcaagga
caaccaggacaaaatggtcaggatggtcaaaagggagataaaggagataaaggagatcaa
ggtgagagaggtgccactggagcaacaggtgctcaaggaccacaaggaccagcgggacaa
aaaggagatccaggagatccagcatcagatgatcagacattatcaacaaatggtaatgca
ggttatgtagctatatcaggaggtaacaatgttactattaatgttgatgatgcagattct
gtaatcggtaacgaatacaatactaattttagagtagtaggtactaatttaagattaaca
gatggcggaggaaactttaatgttccattatcagatttaggttcagatgatcaatatgat
gacgaagtagagttacgtacacctatagatgtagatgaaggaggtgaagcatcaccaaca
gcagaaacaaatgtacaagaagtaatacaagcaatagctcctattacatctaaagcagca
cgtatattttatccgccttctgtagaagtagatgttgcaacaaacggaactaaaacatta
gatttatatgatgagtatattaagcaatatggtacgccaactattggtagtgcaggtgca
ccatcagctttaccaacatatactagaacagaattatattactatgttacatatgcagat
cctactgtatttaatacggctacaatgtctataaatgcaaatggagtattaacatataca
gtaactaatcaacctacagactacaacactttaataaacgttgtatttgtagtaaagtaa
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integrated database retrieval system
