Cellulophaga lytica DSM 7489: Celly_1832
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Entry
Celly_1832 CDS
T01434
Name
(GenBank) RNA polymerase, sigma 54 subunit, RpoN
KO
K03092
RNA polymerase sigma-54 factor
Organism
cly
Cellulophaga lytica DSM 7489
Pathway
cly02020
Two-component system
cly02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
cly00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Celly_1832
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
Celly_1832
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
cly03021
]
Celly_1832
Transcription machinery [BR:
cly03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Celly_1832
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_CBD
Sigma54_DBD
Sigma54_AID
LacI
NES_C_h
RelE
SurA_N_3
DUF6290
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
ADY29655
UniProt:
F0RC21
LinkDB
All DBs
Position
complement(2048171..2049622)
Genome browser
AA seq
483 aa
AA seq
DB search
MLKQHLQFKLSQKLSPQQIQLMKLIQLPTQAFEQRLKQELEENPALESGKEEAETIEDEY
DDLYDNDTEKIEAEDINIDEYLSDDEIPDYRTQANNYSADDDEKSIPYAAGTSFHQHLMT
QLNTVYLDDKDWAIAEFLIGSVDESGYIRRPITDIMDDLAFTQNVFAEEADIIKVLNLVQ
ELDPPGVAARSLEECLIIQLSRKEQTPAIELAIQILEKSFDQFTKKHYKKLLQKHNITED
ELKEAISEIEKLNPKPGGSYAGNTRIIEHIVPDFSIKIADGELELTLNGRNAPELHVSRQ
YNNMLEGYKNSKTKSKSQKDTVFFIKQKLDAAKWFIDAIKQRQQTLYVTMSAIMNYQKEY
FLTGDERKLRPMILKDIADTIGMDVSTVSRVANSKYVDTPYGTKLIKEYFSESMKNEQGE
DVSTKEIKKILENVISEEEKRKPLTDDKLAAILKEKGYPIARRTVAKYREQLNIPVARLR
KQI
NT seq
1452 nt
NT seq
+upstream
nt +downstream
nt
atgcttaaacaacacctacaatttaagttatcacaaaagttgtctccacaacagatacaa
cttatgaagttaattcaacttcctacacaagcttttgaacaacgactaaagcaagagtta
gaagaaaatcctgcattagaaagcggtaaagaagaagccgaaactattgaggatgagtat
gacgatttgtacgataatgacactgaaaaaattgaagctgaagatatcaatattgatgaa
tatctttctgacgacgaaattccagattaccgtacgcaagcaaataactatagtgcagat
gatgatgaaaagagtattccttatgcagccgggacctcttttcatcaacatttaatgaca
caattaaataccgtttatttagatgataaagactgggcaattgccgagtttttaattggt
agtgttgatgaaagcggttatatacgcagaccaattacagacattatggatgatttagct
tttacacaaaatgtatttgcagaagaagcagacataattaaagtactaaatttagtacaa
gagttagatcctcctggtgtggctgcaagatctttagaagaatgcttaattatacagctt
tctagaaaagaacagacacctgctatagaactagcaattcaaatactagaaaagtctttt
gatcagtttactaaaaagcactacaaaaaacttctgcaaaaacacaacattacagaagat
gaactaaaagaagccatttctgaaattgaaaaattaaatccaaagccaggtggctcatat
gctggtaatactagaataatagaacatattgtacctgatttttcaattaaaattgcagac
ggagagctagagctcactctaaacggaagaaatgctcctgaattgcacgtatccagacag
tataataatatgctagaaggctacaaaaattctaaaacaaaatctaaatcacagaaagac
acagttttttttataaaacaaaagctagatgctgccaagtggtttatagacgctattaaa
caaagacaacaaacgctttatgtaacaatgagcgctattatgaactaccaaaaagaatat
tttttaactggagatgagcgaaagcttagaccaatgattttaaaagatattgcagacact
attggtatggatgtttctactgtatctagagtagcaaatagcaaatatgtagacacacct
tatggtactaaattgattaaggaatatttttctgaatctatgaagaatgagcaaggtgaa
gatgtatctactaaagaaattaaaaaaatactagaaaacgttattagtgaagaagaaaag
agaaaacctttaactgatgacaagctagctgctattttaaaagaaaaagggtacccaata
gcaaggcgtactgttgcaaagtacagagaacaattaaatatacctgtagcaaggttaaga
aagcagatttaa
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