KEGG   Chlorobaculum limnaeum: BIU88_01075
Entry
BIU88_01075       CDS       T04492                                 
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
clz  Chlorobaculum limnaeum
Brite
KEGG Orthology (KO) [BR:clz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:clz03016]
    BIU88_01075
Enzymes [BR:clz01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     BIU88_01075
Transfer RNA biogenesis [BR:clz03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    BIU88_01075
 Prokaryotic type
    BIU88_01075
SSDB
Motif
Pfam: TruB_N TruB_C_2 PseudoU_synth_2
Other DBs
NCBI-ProteinID: AOS84947
UniProt: A0A1D8D637
LinkDB
Position
254156..254881
AA seq 241 aa
MIEQGRMSVLSEEGDYLLVDKPLDWTSFDVVARIRGAYKRNGAKRKVGHCGTLDPKATGL
LILATGRKTKTISSLELLDKAYEGVIRLGAKTASHDTESEEYDLRDVSHIDESAIRAAAA
SMVGERMQQPPMHSAVWHNGKRLYELARQGHEVKERKARQIGIRQFEITGIELPYVRFFI
DVTKGAYIRVIAHELGELLGVGGYLAELKRVSIGQYRLSDAASVGEIVDAIGQAAALATE
E
NT seq 726 nt   +upstreamnt  +downstreamnt
atgatcgaacagggccgcatgtccgtcctcagcgaggagggcgattatctgctggttgac
aagccgctcgactggacctcgttcgacgtggtggccaggattcgcggcgcctacaagcgc
aatggcgcgaagcgtaaggtcggccactgcggcacgctcgacccgaaggccaccggcctg
ttgattctcgccacgggccgcaaaaccaagaccatctcgtcgctcgaactgctcgacaag
gcctacgaaggggttatcaggctcggcgcaaaaaccgcgagccacgacacggagagcgag
gagtacgacctccgcgatgtgtcgcatatcgacgaaagtgcgatccgcgccgccgccgca
tcgatggttggcgagcggatgcagcagcctccgatgcactcggcggtctggcacaacggc
aagcggctttacgaactggcgcggcagggccacgaagtcaaggagcgcaaggctcgccag
atcgggattcgccagttcgagatcaccggtatcgagttgccgtacgtccgttttttcatc
gacgtgacaaagggagcctatattcgcgtgatcgcccatgaactcggcgagctgcttggc
gttggcggctatcttgccgaactgaagcgggtgtcgatagggcagtaccggctttcggac
gcggcgagcgtcggggagatcgttgatgcaattggccaggccgccgctttggccaccgaa
gagtaa

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