Chlorobaculum limnaeum: BIU88_02355
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Entry
BIU88_02355 CDS
T04492
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
clz
Chlorobaculum limnaeum
Pathway
clz03030
DNA replication
clz03410
Base excision repair
clz03420
Nucleotide excision repair
clz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BIU88_02355
03410 Base excision repair
BIU88_02355
03420 Nucleotide excision repair
BIU88_02355
03440 Homologous recombination
BIU88_02355
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clz03032
]
BIU88_02355
03400 DNA repair and recombination proteins [BR:
clz03400
]
BIU88_02355
Enzymes [BR:
clz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BIU88_02355
DNA replication proteins [BR:
clz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
BIU88_02355
DNA repair and recombination proteins [BR:
clz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
BIU88_02355
NER (nucleotide excision repair)
GGR (global genome repair) factors
BIU88_02355
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_pol_A_exo1
DNA_polI_exo1
HHH_5
Motif
Other DBs
NCBI-ProteinID:
AOS83088
UniProt:
A0A1D8D5E9
LinkDB
All DBs
Position
complement(525172..528036)
Genome browser
AA seq
954 aa
AA seq
DB search
MTSDNQMGLFDAPPPETPPRPEAVPEKKADAARETGQKPGLFLLDGMALVYRAFYALQQA
RMSTRDGQPTGAVFGFVSSVLRIIEEYRPEYLAVAFDSPEKTFRHDKFEAYKANRPAPPD
DLISQLGDIRKLIRALGIPLVIMPGFEADDLIGTAARKFEADCQVFIVTPDKDMSQLVHD
GVRILKPGKKQNEFELVGSAEVKAQFGAPPEQFIDLLTLTGDTSDNIPGAKGIGPKTASS
LLEKYGSLEGIYANLEALTPKTRQSLEAFREMMPLVRELVTIRTDLDLPLTLEALHASRP
DPEALFAHLARLELKSIAARVPAVLRIDAPAASSSENVPAAADSDDPDDPQLIPASEGSE
YHLVDSEEAFEALLTLLESSAGIAVDTETTSLDTFAAELAGISFSVKPGEAWFVYFGTPG
LDACKAVERLKPLLENPALPKTGQNLKYDMLVLKKYGVELAPVEFDTMLASYVLDPEARH
NLDDLAARHLGRQTVKYGELVGTGKSAIGIFEVEPRKLSDYACQDADIALKLRLTLQEQL
EQTPELFDVCRQLEFPLVSVLARMEHTGVAIDTAHLEQCALTVKRDLETLTGKIFDAAGE
SFNIDSPKQLGHILFEVLQLPPKKATKTGYSTDVQVLEELSILHPIASDLLEYRSLQKLK
GTYIEALPKMINPLTGRVHTSFNQSVAATGRLSSSNPNLQNIPIRTELGKEIRRAFIPSN
KDNLLLSADYSQIELRIAAELSGDPMLIEAFRNREDIHAATARVIFDTAEVTPDMRRKAK
EVNFGVLYGIQPFGLSQRLGITQKEAREIIDTYMAKYPGMFSSLQTTIEEARKRGYVTTL
MGRRRYLPDLNSPNANIRKAAERIAMNTPIQGTAADIIKYAMCSVSRELNTGAFRSVMLL
QVHDELLFETPPAEEARLREMVGRNMVEAAAKCGVKKVPVEVETGVGKNWLEAH
NT seq
2865 nt
NT seq
+upstream
nt +downstream
nt
atgacgagcgacaaccagatgggcctgttcgacgctcccccgcccgaaacgccgccgcga
ccggaagcggttccggagaagaaagccgatgccgcaagagagaccggacagaagccgggc
ctcttcctgctcgacggcatggcgctggtctaccgcgccttctacgcgctgcaacaggcg
cggatgagcacgcgcgacggccagccgaccggcgcggtgttcggtttcgtgtcgagcgtg
ctgcggatcatcgaggagtaccgcccggagtacctcgccgtggccttcgacagccccgag
aagaccttccgccacgataagttcgaggcgtacaaggccaaccgcccggccccgccggac
gacctcatcagccagctcggcgacatccggaagctgatccgggccctcggcattccgctc
gtgatcatgcccggcttcgaggcggacgacctcatcggcacggcggcgcggaagttcgag
gccgactgccaggtcttcatcgtcacgcccgacaaggatatgtcgcagctcgtgcacgac
ggcgtgcgcatcctcaagcccggcaagaaacagaacgagttcgagctggtcggcagcgcc
gaggtgaaggcgcagttcggcgcaccgccggagcagttcatcgacctgttgacgctcacc
ggcgacacctcggacaacattcccggcgcgaaggggatcggcccgaaaaccgcctcgagt
ctgcttgaaaagtacggttcgctcgaaggcatctatgccaatctcgaggcgctgacgccc
aagacgcgccagagcctcgaagcgttccgcgagatgatgccgctcgtgcgcgagctggtg
acgatccgcaccgacctcgacctgccgcttacgctcgaagcgctgcacgcgagcaggccc
gaccccgaggcgctcttcgcgcacctggcgaggctggagctgaagagcatcgccgcccgc
gtgcctgccgttctgcggatcgacgcgcccgccgcttcgtcttccgaaaacgtaccggca
gcggcagactctgacgaccccgacgatccgcaactgatcccggcgagcgaaggctcggag
tatcacctcgtggacagcgaggaggcgttcgaagcgcttctgacgctgctcgaaagctcc
gccggaatcgcggtcgataccgaaaccacgagtctcgacaccttcgcggcggagctggcg
ggcatctccttctccgtcaaacccggcgaggcttggttcgtctacttcggcacgccgggg
ttggacgcctgcaaggcggtcgagcgcctcaagccgctgcttgaaaatccggcgctgccc
aagaccggccagaacctgaagtacgacatgctcgtgctgaagaagtacggcgtggagctt
gcgccggtcgagttcgacaccatgctcgcaagctacgtgctcgacccggaggcgcggcac
aatctcgacgatctggccgccaggcatctcgggcggcagaccgtgaagtacggcgagctg
gtcggcacgggcaagtcggccatcggtatcttcgaggtcgaaccccgcaagctctcggac
tacgcctgccaagacgccgacatcgccctcaagctgcgcctgacgcttcaggagcagctt
gaacagacgcccgaactcttcgacgtctgccgccagctcgaattcccgctggtgagcgtg
ctggcccggatggagcacacgggcgtcgccatcgacacggcgcacctcgaacagtgcgct
ctgacggtcaagcgcgatcttgaaacgctgaccggcaagattttcgatgccgctggcgag
agcttcaacatcgattcgccgaagcagctcggccacatcctcttcgaggtgctgcaactg
ccgccaaaaaaggccaccaaaaccggctactcgaccgacgtgcaggtactcgaagagctg
tcgatcctccacccgatagcctccgacctgctcgaataccgcagcctgcagaagcttaag
ggcacctacatcgaggcgctgccgaagatgatcaacccgctgacgggccgggtgcacacc
tcgttcaaccagtcggtcgcggccaccgggcggctctcgtcgtcgaacccgaacctgcag
aacatcccgatccgcacggaactcggcaaggagattcgccgcgccttcatcccgtcgaac
aaggacaatctcctgctctcggcggactactcgcagatcgagctgcgcatcgccgccgag
ctgtcgggcgacccgatgctcatcgaggcgttccgcaaccgcgaggatatccacgccgcc
acggcgcgggtgatcttcgacacggcggaggtgacgcccgacatgcggcgcaaggccaag
gaggtcaacttcggcgttctctacggcatccagcccttcggactctcgcagcgcctcggc
atcacgcagaaagaggccagggagatcatcgacacctacatggccaaatatcccggcatg
ttctcttcgctccagacgactatcgaggaggcgcggaaacgcggttacgtcaccaccctg
atgggccgccgccgctacctgccagacctgaacagcccgaacgccaacatccgcaaggcc
gccgagcgcatcgcgatgaacacgccgatccagggcacggcggcggacatcatcaaatac
gccatgtgctccgtcagccgcgaactgaacaccggagccttccgctcggtgatgttgttg
caggtgcacgacgaactgctcttcgaaacgccgccagccgaagaggcgcgtctcagggag
atggtcgggcgcaacatggtcgaagccgccgcgaaatgcggggtgaagaaggttcctgtg
gaggtggagaccggggtcggaaaaaactggctggaggcccattag
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