Chlorobaculum limnaeum: BIU88_03935
Help
Entry
BIU88_03935 CDS
T04492
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
clz
Chlorobaculum limnaeum
Pathway
clz00300
Lysine biosynthesis
clz00470
D-Amino acid metabolism
clz01100
Metabolic pathways
clz01110
Biosynthesis of secondary metabolites
clz01120
Microbial metabolism in diverse environments
clz01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
BIU88_03935
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
BIU88_03935
Enzymes [BR:
clz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
BIU88_03935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
AOS83366
UniProt:
A0A1D8CWT4
LinkDB
All DBs
Position
876863..878113
Genome browser
AA seq
416 aa
AA seq
DB search
MLDSHFFSFSDGTLCCESVRLEELAAQFGTPLFVTSRQSLVSQYRAFEEAFASLPHFTCY
SVKANFNLSVIRTLAEKGCGCDVNSGGELYRALKAGVPAEKIIMAGVGKSDAEIKYGLTS
GVMMIKAESISELKAINSVAERLGKVAQVGVRINPNVTAETHPYITTGDSKEKFGIDEAG
LGEVFELFKTLPNLELHGLDMHIGSQIFDPEYYVAATQKLLEVLESARHLGFDIKWLDLG
GGFPVTYDPQKPATPITKFAEKLIPMLEDKGVTVIFEPGRFIAANASVLLTRILYRKRNQ
IGKEFFIVDAGMTELIRPALYQSHHEVLAVTQHDKSVVADVVGPVCESSDFFARHRIIDD
APEGELLAVLSAGAYGSVMGTNYNGRLRPAEVMVDGNEVTLTRRRETYEQLVQNEL
NT seq
1251 nt
NT seq
+upstream
nt +downstream
nt
gtgctggatagtcattttttttcattttcagacggaaccctctgctgtgaatcggtcaga
ctcgaggagctggccgcgcagttcggaactccgcttttcgtgaccagtcggcagagcctg
gtcagtcagtaccgggctttcgaggaggccttcgcctctctgccgcattttacctgctac
tcggtcaaggcaaactttaatctttcggtcatccgcacgttggccgaaaagggttgcggc
tgcgacgtcaactcgggcggcgaactctatcgcgccctcaaggctggcgtgcccgccgag
aagatcatcatggctggcgtcggcaagagcgatgcggaaatcaagtacggcttgacctcc
ggcgtgatgatgatcaaggccgagtcgatctctgagctcaaggcaatcaacagcgtcgcc
gagcgtctcggcaaggttgcacaggtcggcgtcaggatcaacccgaacgtcaccgccgaa
acccacccctacatcaccaccggcgacagcaaggagaagttcggcatcgacgaagccgga
cttggcgaggtgttcgagctgttcaagacactgccgaacctcgaactgcacggcctcgac
atgcacatcggctcgcagattttcgatccggagtactacgtcgctgccacgcagaagctg
ctcgaagtgctcgaatcggcgcggcacctcggtttcgacatcaaatggctcgatctcggc
ggtggctttccggtcacttacgatccgcagaagcccgccacgcccatcacgaagtttgcc
gaaaagctcattccgatgctcgaagacaaaggagtcacagtcattttcgaaccgggccgg
ttcatcgcggccaacgcctcggtgctgttgaccagaattctctaccgcaagcgaaaccag
atcggcaaggagttcttcatcgtcgatgcgggcatgaccgagctgattcgcccggcgctc
tatcagtcgcaccacgaagtgcttgccgtcacgcagcatgacaagagcgtcgtcgccgac
gtggtcggcccggtctgcgaatcgagcgatttcttcgcccgccaccgcatcatcgacgac
gctcccgaaggcgaactgctcgccgtgctctccgccggagcctacggctcggtgatgggc
accaactacaacggccgacttcgccctgccgaagtaatggtcgatggcaacgaggtcacg
ctgacgcgccgccgcgaaacctacgagcagctcgtacagaacgagttgtaa
DBGET
integrated database retrieval system