Chlorobaculum limnaeum: BIU88_04075
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Entry
BIU88_04075 CDS
T04492
Name
(GenBank) hypothetical protein
KO
K20276
large repetitive protein
Organism
clz
Chlorobaculum limnaeum
Pathway
clz02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
BIU88_04075
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
choice_anch_I
Alk_phosphatase
He_PIG
Big_5
SWM_repeat
Big_9
Cadherin_5
CopC
Motif
Other DBs
NCBI-ProteinID:
AOS83391
UniProt:
A0A1D8CZ31
LinkDB
All DBs
Position
911877..917897
Genome browser
AA seq
2006 aa
AA seq
DB search
MVINPNPLLNASVDGPGNVVTLYFSDKLDTSSVPALDQFAVFSDGIEQVITAIQLVNNQV
ILTLAASLDSLLPVTVSYTSSSDTLQNINGDDVASFEDAEVDNQLSLTASESESFTFAST
ITMDYGAEISAFDPSSQRLFVTSPEGGLQILGIDDQLQMTKFATIELGSNMVNSVAVKNG
IVAVAVADADKTQPGKVYFLDAGATILDASMILGSVEVGANPDMLTFTPDGSKVLVANEG
EMASESSDPEGSVSIIDLSEVLAGKATEPTVTTAGFTAFNSQLDALKEAGVRLFAGEDGF
ESTTVAQDLEPEYISISPDGTTAFVTLQENNAIAILDIASGTFTGIVPLGLKSFSSLPFD
GSDKDGIDLQTGQPVYGKYMPDAIASFTGSDGKTYYVIANEGDDRDDFLATPETARVKDL
VLDSTVFPDAATLQGNNELGRLTVSNASGNNGDTDGDGDIDQLLAYGARSFSILDSEGNI
VFDSASHIEQFVAQYGLYTGAAGAGLFDDGRSDNKGPEPEGITVGVVDGKTLAFVTLERG
GGGVMVYDVTNPEEVSFVQYLAHSGDVSPEGVLFISAADSPTGHELLIVSNEVSNTVTIF
QENHAPELVDGYSDVTVMEDQAFDRVLVVENMFSDADEDDTLTYTVTLANGDPLPTWLTV
SETEQNLDEMLDYFKSGGQWPATDSASAGTAIATGVKTVDGNIAWERTDSAGGEIETIAE
TLRGELGYAIGVASTVPFSHATPATFVSHDVSRNNYWDIAHEILFETQPEVVIGGGMENS
NFAKAVKSAGNVDRDLDDNGYNDDYDAFVNDTDGTEYVFVKREEGEDGGDTLAAAAATVD
LSAGEKLFGLYGTSGGNFEYYNVYDTPGIATITRSTTDATPTVDEDPTLAEVTNVSLSVL
NQDADGFFIMIEQGDIDWRNHANDYENMIGGVYDLEMAVTAAENYVASGVNGIDWSNTLV
IVTSDHSNSYLRAQEELGMGDLPEQNGKSYPDGEVTYASGGHTNELVTVSARGAGATYFG
ELAGQIYDGTEIIDNTQIYEAMMKAATEAGAEHIILFIGDGMNVEHEIAGSRYLYGEDFG
LTWHDWGTLEDGWSGYASTWDVTAYNKYASMAGVDSYSETTFDPLIGYDPAKGGVTPYPV
EMPESFTLSGTPGNDEVGSIEIKVTATDKSGVSVSDTFTLTVENTNDAPMVANAIADQGA
TEDAAFSFTVPSNTFNDVDAGDTLSYTATLADGSVLPGWLSFNAGTRTFSGTPDNDEVGS
IEIKVTATDESGVSVSDTFTLTVENTNDAPEVGRAIENVTVLEDGKLNYHVLSNSFTDVD
AGDTFTYTATLANGDPLPDWLNFDASSHNLETMEKYFLAGGSAKKATDSASAGTAIATGV
KTVDGNIAWERTDSAGGEIETIAETLRGELGYAIGVASTVPFSHATPATFVSHDVSRNNY
WDIAHEILFETQPEVVIGGGMENSNFAKAVKSAGNVDRDLDDNGYNDDYDAFVNDTDGTE
YVFVKREEGEDGGDTLAAAAATVDLSAGEKLFGLYGTSGGNFEYYNVYDTPGIATITRST
TDATPTVDEDPTLAEVTNVSLSVLNQDADGFFIMIEQGDIDWRNHANDYENMIGGVYDLE
MAVTAAENYVASGVNGIDWSNTLVIVTSDHSNSYLRAQEELGMGDLPEQNGKSYPDGEVT
YASGGHTNELVTVSARGAGATYFGELAGQIYDGTEIIDNTQIYEAMMKAATEAGAEHIIL
FIGDGMNVEHEIAGSRYLYGEDFGLTWHDWGTLEDGWSGYASTWDVTAYNTYAGLNGVDD
YVDFDSANKVIGYDPAQGGETPYPVAMTFSGTPGHEDVGSIEIKVTATDKSGVSVSDTFT
LTVVDDVAPTVTASNPADEAAAVDVNGTITFEFSEEIELLDETGVVLHAGSVDGTVVDAD
VSVTGSTLMVDPTGALVNGTEYYLTFDGDAVCDLAGNYYDDDESDVFHFTTLEAAVAATG
GSSDGLGAGEMLAGVAGIGLLAFLIF
NT seq
6021 nt
NT seq
+upstream
nt +downstream
nt
atggtaatcaatcccaacccgttgctcaatgccagcgtggacggtcccggcaacgtcgtg
accctctatttttcggacaagctcgatacgtcgagtgttccggcgcttgaccagtttgcc
gttttcagcgatggcatcgaacaggtaatcaccgccatccagctggtgaataaccaggtc
attctgaccctggccgcatcactcgacagcctgctgccggtcacggtctcctatacctcc
tcttccgatactctccagaacatcaacggtgacgacgtcgcctccttcgaggatgccgag
gtcgacaatcagctttcgctgacggcttccgagagcgagtcgttcacgtttgcttcgacc
attacaatggattacggcgcggaaatttccgcattcgatccttcgagccagcgcctgttc
gtgacctctccggagggtggcttgcagattctcggaatcgacgatcagttgcagatgacc
aaattcgcaaccatcgagctcgggagcaatatggtcaacagcgtggccgtcaagaatggt
atcgtggctgtcgcggttgccgatgctgacaaaacccagccgggcaaggtctatttcctt
gatgcaggtgcgacgattcttgatgcttcgatgattcttggcagcgtcgaggtcggcgcc
aatcccgacatgctgaccttcacgcccgacggcagcaaggtgctggtggccaacgagggt
gaaatggcaagcgaatccagcgatcccgaaggttcggtgagcatcatcgatctcagcgag
gttcttgccggtaaggctaccgagccgaccgtcaccaccgccggcttcaccgcgttcaac
tcgcagctcgacgcgctcaaggaggctggcgtcaggctctttgccggtgaggatggtttt
gaaagcacgacagtcgcccaggacctcgaaccggaatacatcagtatctctcccgatggc
acgacggcgttcgtgacgcttcaggagaacaatgctatcgcgattctcgatatcgcttcc
ggtacgtttaccggtattgttccccttggtctgaagagcttctccagccttccgtttgac
ggcagcgacaaggacgggatcgatctccagacaggccagccggtctatggtaagtacatg
ccggatgccatcgcttccttcaccggctccgacggcaagacctactacgtgatcgccaat
gagggcgatgatcgcgacgattttctcgccacaccggagaccgcgcgcgtcaaagacctc
gtgctcgattcgacggtgtttccagatgcggcgacgcttcagggcaataacgagctggga
cgtctcacagtctcaaatgcgtctggtaacaacggcgacaccgatggcgatggcgacatc
gatcagcttcttgcctacggtgctcgctctttcagcattcttgactcggagggcaatatt
gttttcgacagcgcctcgcatatcgagcagttcgtcgcccaatatggtctgtacaccggt
gccgccggagccgggctttttgatgatggccgttccgacaacaagggcccggagcctgag
ggcattaccgtcggagtcgtggatggcaaaaccctcgccttcgtgacgctcgaacggggt
ggcggtggcgtgatggtctatgatgtgaccaatccggaagaggtcagctttgtgcagtac
ctcgcccattccggtgatgtgagtccggaaggggtactgttcatttcggctgctgacagc
ccgaccggccatgaactgctgatcgtcagcaacgaggtctccaacacggtcaccatcttt
caggaaaatcatgcacctgagctcgttgacggatacagtgatgtgaccgtcatggaggat
caggcattcgacagggtgctggtggttgaaaacatgttcagtgatgccgatgaggacgat
acgctgacctacacggtgacgctggccaacggtgatccactgccgacgtggctgacagtg
agtgagacggagcaaaacctggacgaaatgctggattacttcaagtccgggggacagtgg
cctgcgacggactcggcatctgccggaacggcaattgccacgggagtgaagacagtggat
ggcaacatcgcctgggagcgtaccgacagcgctggaggcgagatcgagaccatcgctgaa
acgttgcggggcgagcttggctacgcgatcggtgtcgccagcacggtgccgttctcgcac
gccactccggcgaccttcgtgagccacgatgtgagccgcaacaactactgggacatcgcg
cacgagattctgttcgagacgcagccggaggtggtgattggtggtggcatggagaacagc
aactttgccaaagcggtcaaatcggcaggtaacgttgaccgtgacctcgatgacaacggc
tacaacgatgattacgatgcgtttgtcaacgataccgacggtacggagtatgtgttcgtc
aaacgcgaagagggcgaggacggcggagatacgctggcagcggctgcggcgacggtcgat
ctctctgcgggcgagaagcttttcggcctttatggtacctcaggcggcaactttgaatac
tacaatgtgtatgacactccgggcattgcaaccatcacgcgcagcacgaccgacgcgacg
ccgacggttgacgaagacccgacgctggccgaggtgacgaacgtctcgttgtcggtgctt
aaccaggatgcggatggcttcttcatcatgatcgagcagggcgacatcgactggagaaac
cacgccaacgactacgaaaacatgattggcggcgtctatgatctcgaaatggcggtcacc
gcagccgagaactatgtggcttcgggagtcaacggcatcgactggtcgaacacgctggtg
atcgtcacgagcgaccactcgaacagctacctgcgagcacaggaagagctgggcatgggt
gaccttccggagcagaacggaaagagctatcctgatggtgaggttacctatgcttcgggt
ggtcacaccaacgagctggttacggtctcggcacgcggcgcgggtgccacgtattttggc
gagcttgccggtcagatttacgatggtacggagatcatcgacaacacgcagatttacgag
gcgatgatgaaagccgccacggaggccggagcggagcatatcatcctcttcatcggcgac
ggcatgaacgtggaacacgaaatcgccggaagtcgctatctgtacggggaggatttcggc
ctgacgtggcatgactggggtacgctggaggatggctggtctggctatgcgagcacctgg
gacgtgacggcgtacaacaagtacgcgagcatggccggggtggattcctacagcgagacc
accttcgatccgctgatcggctacgatccggcaaagggcggcgtgacgccgtaccctgta
gagatgcccgaatcgtttacgctgagtggcacaccgggcaacgatgaggtcggttccatt
gagatcaaggtgaccgctaccgacaagagtggcgtcagcgtcagcgatacgttcacgctg
acggtggagaacaccaacgatgcgccgatggtggccaacgcgatagccgatcagggcgca
accgaagacgcagccttcagcttcacagttccatcaaataccttcaatgatgtggatgcg
ggcgacacgttgagctacacggcaacgctggccgatggcagtgtgctgcccggctggctg
agcttcaatgccggaacacgaaccttcagcggcacaccggacaacgatgaggtgggctcc
atcgagatcaaagtgacggccaccgacgagagtggcgtcagcgtcagcgatacgttcacg
ctgacggtggagaacactaacgatgcgccggaagttggcagggccatcgagaatgtgacc
gtgctggaagatggcaagctcaactaccatgtactctcaaacagcttcacggatgtggat
gcaggcgacacgttcacctacaccgcgaccctggccaacggcgatccactgccagattgg
ctgaacttcgatgcatcgagccacaatctggagacgatggagaagtacttcctggctggc
ggttcggcgaagaaagccacggactcggcatctgccggaacggcaattgccacgggagtg
aagacagtggatggcaacatcgcctgggagcgtaccgacagcgctggaggcgagatcgag
accatcgctgaaacgttgcggggcgagcttggctacgcgatcggtgtcgccagcacggtg
ccgttctcgcacgccactccggcgaccttcgtgagccacgatgtgagccgcaacaactac
tgggacatcgcgcacgagattctgttcgagacgcagccggaggtggtgattggtggtggc
atggagaacagcaactttgccaaagcggtcaaatcggcaggtaacgttgaccgtgacctc
gatgacaacggctacaacgatgattacgatgcgtttgtcaacgataccgacggtacggag
tatgtgttcgtcaaacgcgaagagggcgaggacggcggagatacgctggcagcggctgcg
gcgacggtcgatctctctgcgggcgagaagcttttcggcctttatggtacctcaggcggc
aactttgaatactacaatgtgtatgacactccgggcattgcaaccatcacgcgcagcacg
accgacgcgacgccgacggttgacgaagacccgacgctggccgaggtgacgaacgtctcg
ttgtcggtgcttaaccaggatgcggatggcttcttcatcatgatcgagcagggcgacatc
gactggagaaaccacgccaacgactacgaaaacatgattggcggcgtctatgatctcgaa
atggcggtcaccgcagccgagaactatgtggcttcgggagtcaacggcatcgactggtcg
aacacgctggtgatcgtcacgagcgaccactcgaacagctacctgcgagcacaggaagag
ctgggcatgggtgaccttccggagcagaacggaaagagctatcctgatggtgaggttacc
tatgcttcgggtggtcacaccaacgagctggttacggtctcggcacgcggcgcgggtgcc
acgtattttggcgagcttgccggtcagatttacgatggtacggagatcatcgacaacacg
cagatttacgaggcgatgatgaaagccgccacggaggccggagcggagcatatcatcctc
ttcatcggcgacggcatgaacgtggaacacgaaatcgccggaagtcgctatctgtacggg
gaggatttcggcctgacgtggcatgactggggtacgctggaggatggctggtctggctat
gcgagcacctgggacgtgacggcgtacaacacctatgcagggctgaacggagtcgatgac
tacgttgatttcgatagcgccaataaggtgattggctacgaccctgcgcagggcggcgag
accccctatccggtcgcgatgaccttcagcggcacgccgggccacgaagatgtcggctcc
atcgagatcaaggtaaccgccaccgacaagagtggcgtcagcgtcagcgatacgttcacg
ctgacggtggtggatgatgttgcaccgacggttaccgcctccaatcctgcggacgaagcg
gcagcggtggacgtcaacggcaccatcactttcgaattcagcgaagagatcgagctcctc
gatgagaccggtgtggtgctgcatgccggctcggtggatggcaccgtggtggatgctgac
gtttcagtcaccggctcgacgctgatggtcgatccgacgggcgcgctggtcaacggcacc
gagtactacctgaccttcgatggcgatgcagtctgtgacctcgctggcaattactacgat
gacgatgagtctgatgttttccacttcacgacgctcgaagcagctgttgcggccactgga
ggttcttcggatggccttggcgctggtgaaatgctggctggcgtggccggaatcggcctt
ctcgccttcctgattttctga
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