Chlorobaculum limnaeum: BIU88_04180
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Entry
BIU88_04180 CDS
T04492
Name
(GenBank) DNA polymerase III, subunit gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
clz
Chlorobaculum limnaeum
Pathway
clz03030
DNA replication
clz03430
Mismatch repair
clz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BIU88_04180
03430 Mismatch repair
BIU88_04180
03440 Homologous recombination
BIU88_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clz03032
]
BIU88_04180
03400 DNA repair and recombination proteins [BR:
clz03400
]
BIU88_04180
Enzymes [BR:
clz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BIU88_04180
DNA replication proteins [BR:
clz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BIU88_04180
DNA repair and recombination proteins [BR:
clz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BIU88_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNAX_ATPase_lid
DNA_pol3_gamma3
AAA
AAA_22
RCF1-5-like_lid
AAA_14
AAA_16
DUF7090
AAA_assoc_2
AAA_18
TsaE
Motif
Other DBs
NCBI-ProteinID:
AOS83411
UniProt:
A0A1D8CZ49
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All DBs
Position
939043..940896
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AA seq
617 aa
AA seq
DB search
MSYQVIARKYRPARFADITAQEHITGTIQNSLRMGRVGHGYIFSGLRGVGKTTAARVFAK
AVNCERMIDDPKYLKEVTEPCGECESCRDFDAGASLNISEFDAASNNGVDDIRLLRENVR
YGPQKGRYRVYIIDEVHMLTTAAFNAFLKTLEEPPPHAIFIFATTELHKIPATIASRCQR
FNFKRIPIDRIQGQLQQICDAEGIQADADALQLVARKAQGSMRDAQSILDQVIAFALDNE
GERAIRYEKVSDLLSYIDDDHFFMVTDAIANADAAAMLDLAGMVHRNGYDEQDFIEKLIE
HFRNFLIIHNLRSSKLIERPEPVKERYQRDALRLTPAAIMAMTDFLMQTQRELKFYAEHQ
FRFELALLKLIELGRGTSQTPTAPADEKKKPEPVAPPSASPAPSKPAASARRSKTASTPE
SSATPSGLPLVPEPPPAPPAGRTAPRQSGSKPAAAIDLGSWKQAFSKFGSNADQHLPARN
RSQVEESGVGDSGAPVAVLEQLRMEWGRFLEHLSAKGLQVLVSHLHASELMACSPSGVVQ
LGCCRKFSFEELQHDSALLESELSDFYKLPLKLAVRYDAERDACTREKSVFTMFQELTET
NEVVRYLITEFGAELAY
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgagttatcaggttatagcgcgaaagtatcgtccggcacggtttgccgacattaccgcg
caggagcacattaccggaacgatccagaactcgctcaggatgggcagggtcggccatggc
tatatcttttcgggacttcgcggcgtgggcaagaccacggcggcgcgcgtgttcgccaag
gcggtcaactgcgagcggatgatcgacgatccgaagtacctcaaggaggtgaccgagccg
tgcggcgagtgcgagagctgccgcgacttcgacgcgggcgcgagcctgaacatctccgag
tttgacgccgcctccaacaacggcgtggacgacattcgcctgcttcgcgagaacgtgcgc
tacggcccgcagaaggggcgttaccgcgtctacatcatcgacgaggtgcacatgctcacg
acggcggccttcaacgccttcctcaagacgctcgaagagccgccaccgcacgcgatcttc
atcttcgccaccaccgagctgcacaagattccggccaccatcgcctcgcgatgccagcgc
ttcaacttcaagcgcatcccgatcgaccgcatccagggccagctccagcagatatgcgac
gccgagggcatccaggccgacgccgacgcgctccagctcgtcgcccgcaaggcgcaggga
tcgatgcgcgacgcgcagagcattctcgaccaggtgatcgccttcgccctcgacaacgag
ggggagcgggccatccgctacgaaaaggtctccgacctgttgagctacatcgacgacgac
cactttttcatggtgaccgacgccatcgccaacgctgacgccgccgcgatgctcgacctg
gcgggcatggtgcaccgcaacggctacgacgagcaggatttcatcgaaaagctcatcgag
catttccgcaacttcctcatcatccacaacttgcggtcgagcaagctgatcgagcgcccg
gagccggtcaaggagcgctaccagcgcgacgccttgcgcctgacgcctgcggcgatcatg
gcgatgaccgactttctcatgcagacgcaacgcgagctgaagttctacgccgagcaccag
ttccgctttgagctggcgctgctcaagctgatcgagcttggccgtggaacctcgcagact
ccaaccgctccggcggacgaaaaaaaaaagcctgagcctgtagccccgccctccgcatct
ccagctccatcgaagcctgcggcctccgcccgccgctcgaaaaccgcgtccactccagaa
tccagcgcaaccccgtccggattgccgctggtgcctgaaccgccgcccgcgcctccggca
gggcgcaccgctccgcgccagtccggttccaaaccggcagccgccatcgacctcggctcg
tggaagcaggctttctccaaattcggcagcaacgccgaccagcatcttccggcgcgaaac
cgctcgcaagtagaggagagcggcgtcggcgacagcggcgctcctgtcgccgtgctcgaa
cagttgcgcatggagtgggggcgcttcctcgaacacctttccgccaagggtttgcaggtg
ctcgtgtcgcatcttcacgccagcgagctgatggcgtgcagcccgtcgggcgtggtgcag
ctcggctgctgccggaaattctcgttcgaagagcttcagcacgactccgccctgctcgaa
agcgagctctccgatttctacaaactcccgctcaaactcgctgtccgctacgacgccgaa
cgcgacgcctgcacccgcgaaaagagcgtcttcacgatgttccaggagctgacggagacg
aacgaggtcgtgcggtatctgataaccgagttcggcgcggagctggcgtattga
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