Chlorobaculum limnaeum: BIU88_04835
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Entry
BIU88_04835 CDS
T04492
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
clz
Chlorobaculum limnaeum
Pathway
clz03030
DNA replication
clz03430
Mismatch repair
clz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
BIU88_04835
03430 Mismatch repair
BIU88_04835
03440 Homologous recombination
BIU88_04835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
clz03032
]
BIU88_04835
03400 DNA repair and recombination proteins [BR:
clz03400
]
BIU88_04835
Enzymes [BR:
clz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
BIU88_04835
DNA replication proteins [BR:
clz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
BIU88_04835
DNA repair and recombination proteins [BR:
clz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
BIU88_04835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
RNase_H_2
DNA_pol_A_exo1
Motif
Other DBs
NCBI-ProteinID:
AOS83526
UniProt:
A0A1D8CX71
LinkDB
All DBs
Position
1095508..1096134
Genome browser
AA seq
208 aa
AA seq
DB search
MQRKLADTLVVLDFETTGLSPEHGDRTIEIGAVLLENGTIADRFQRLMNPGFRISRFIEG
YTGITNEMLKGEPRCEEVMADFSEFIAGHNIVAHNASFDRRFLDAELKRLNQAYEGECCC
SLLLSRRIYQEAPNHKLQTLVSYAALPQTGRFHRAQADAEMTASLWMSMIDRIRRQYGLS
TIFFDQLSELSKIDRLYAHRYLSGLAEE
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgcagcggaagttggcggatacgctggtagtgctggatttcgaaacgactggattgtcg
ccggagcatggtgaccggaccatcgagatcggcgcggtgctgctcgaaaacggaacgatt
gccgatcgattccagcggctcatgaatcccggatttcgtatcagccggttcatcgaaggg
tacactggtattaccaacgagatgctcaaaggtgagcctcgttgcgaagaggtgatggcc
gatttttcggagtttatcgccgggcacaatatcgtggcgcacaatgcgtcatttgaccgg
cgttttcttgacgccgagctgaaacggctgaaccaggcctacgagggggagtgctgctgc
tcactccttctatcgcggcgaatttatcaggaggctccgaatcacaagttacagacgctt
gtttcttatgctgctcttccgcaaaccggtcgttttcaccgtgcgcaggccgatgccgag
atgacggcatccttgtggatgtcgatgattgaccgcattcgccggcaatatggtctctct
acaatatttttcgaccagttgagtgaactctcgaaaatcgacaggctttatgcccaccga
tatctttctggcttggcggaggagtga
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