Chlorobaculum limnaeum: BIU88_05110
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Entry
BIU88_05110 CDS
T04492
Name
(GenBank) DNA repair protein RadA
KO
K04485
DNA repair protein RadA/Sms
Organism
clz
Chlorobaculum limnaeum
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clz03400
]
BIU88_05110
DNA repair and recombination proteins [BR:
clz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
BIU88_05110
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATPase
AAA_25
Zn_ribbon_LapB
Lon_C
ChlI
DnaB_C
AAA_16
AAA_22
Rad51
AAA_14
nSTAND3
AAA_24
NTPase_1
AAA
SLFN-g3_helicase
AAA_5
KdpD
NACHT
AAA_10
CobU
AAA_18
RNA_helicase
ATPase_2
Glyco_tran_WecG
NPHP3_N
Zn_ribbon_Nudix
Motif
Other DBs
NCBI-ProteinID:
AOS83578
UniProt:
A0A1D8D655
LinkDB
All DBs
Position
complement(1154560..1155930)
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AA seq
456 aa
AA seq
DB search
MAKSTVRYVCSACGAVSLKYQGRCFECQSWGTLVETHEQAPEGKTRKKAPSGAMPEVQNL
DDTAPLNFHRTLTGIGELDRVLGGGLMEASAILVGGEPGIGKSTLMIQLVPRLAGKKVLY
VAGEESPNQIRERARRLSIKAPNLRLVAEVALERILDAIASEQPDLVIVDSIQTVYSTDY
QSSAGTITQIRECAASLIRAAKEQNFILLIIGHITKEGSLAGPKALEHMVDTVLQFEGEG
YQRYRIIRSVKNRFGPTNEIGVFRMEESGLEEVANPSEFFISDRRTDVAGTAVLAGIEGS
RALLVEVQALVSRTGYSMPQRISTGFDLKRIAIILAVLEKRLQFQTAGQDVFVKIAGGLR
LVEPAADLAVAAAIASGLQDKPCNPAAACCGEIGLAGELRAISDGERRIREAVHLGFKSI
VLPESNTRELKPSLKKLPIKIHGCRTLHEALEAMGV
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaatcgaccgttcgttacgtctgctccgcctgcggggccgtttcgctgaaatac
cagggacgctgcttcgagtgccagagctggggtacgctcgtcgaaacgcacgagcaggcg
ccggagggcaaaacccgcaagaaagcgccttccggcgcgatgccggaggtgcagaatctc
gacgataccgcgccgttgaacttccaccgtacgctgaccggcatcggcgaactcgaccgc
gtactcggcggcggactgatggaggcgtcggcgattctcgtgggcggcgagccgggcatc
ggcaaatcgacgctgatgatccagcttgtgccgcgcctggcgggcaaaaaggtgctctac
gtggcaggcgaggagtcgccgaaccagatccgcgaacgcgcccggcgtctttcgatcaag
gcaccgaacctgcgcctcgtcgcggaggtggcgctcgaacgcatcctcgacgccatcgcg
agcgagcaacccgatctggtgatcgtcgattcgatccagaccgtctattcgaccgactac
cagagttccgccggaaccatcacgcagattcgcgaatgcgccgcctccctcatccgcgcg
gccaaggagcagaacttcatccttctgattatcggccacatcaccaaggaggggtcgctg
gccgggccgaaggcgctggagcacatggtggacaccgtgttgcagttcgagggcgagggg
taccagcgctaccgcatcatccgctcggtcaaaaaccgcttcggcccgaccaacgagatc
ggcgtgttccgcatggaggagagcggccttgaagaggtggcgaatccttcggagttcttc
atctccgaccgccggacggacgtggcgggcacagcggtgctggcgggcatcgaggggtcg
cgggcgctgctcgtggaggtgcaggcgctcgtctcgcgcacagggtactcgatgccgcag
cgcatcagcaccggcttcgacctcaagcgcatcgccatcatcctcgccgtgctcgaaaag
cgcttgcagttccagaccgccgggcaggatgtgttcgtgaaaattgccggaggactcagg
ctcgtcgaaccggcggcggatctggccgtagcggcggccatcgcctcggggttgcaggac
aagccgtgcaatccggcggcggcctgctgcggcgagatcggcctggcgggcgaactccgc
gccatcagcgacggcgagcgccgcatccgcgaggcggtgcaccttggcttcaagtcgatt
gttttgccggagtcgaacacccgcgaactcaagccgtcgctgaagaagctgccgatcaaa
atccacggctgccgcacgctccacgaagcgctcgaagctatgggggtgtga
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