KEGG   Chlorobaculum limnaeum: BIU88_05110
Entry
BIU88_05110       CDS       T04492                                 
Name
(GenBank) DNA repair protein RadA
  KO
K04485  DNA repair protein RadA/Sms
Organism
clz  Chlorobaculum limnaeum
Brite
KEGG Orthology (KO) [BR:clz00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:clz03400]
    BIU88_05110
DNA repair and recombination proteins [BR:clz03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   HR (homologous recombination)
    RecFOR pathway proteins
     BIU88_05110
SSDB
Motif
Pfam: ATPase AAA_25 Zn_ribbon_LapB Lon_C ChlI DnaB_C AAA_16 AAA_22 Rad51 AAA_14 nSTAND3 AAA_24 NTPase_1 AAA SLFN-g3_helicase AAA_5 KdpD NACHT AAA_10 CobU AAA_18 RNA_helicase ATPase_2 Glyco_tran_WecG NPHP3_N Zn_ribbon_Nudix
Other DBs
NCBI-ProteinID: AOS83578
UniProt: A0A1D8D655
LinkDB
Position
complement(1154560..1155930)
AA seq 456 aa
MAKSTVRYVCSACGAVSLKYQGRCFECQSWGTLVETHEQAPEGKTRKKAPSGAMPEVQNL
DDTAPLNFHRTLTGIGELDRVLGGGLMEASAILVGGEPGIGKSTLMIQLVPRLAGKKVLY
VAGEESPNQIRERARRLSIKAPNLRLVAEVALERILDAIASEQPDLVIVDSIQTVYSTDY
QSSAGTITQIRECAASLIRAAKEQNFILLIIGHITKEGSLAGPKALEHMVDTVLQFEGEG
YQRYRIIRSVKNRFGPTNEIGVFRMEESGLEEVANPSEFFISDRRTDVAGTAVLAGIEGS
RALLVEVQALVSRTGYSMPQRISTGFDLKRIAIILAVLEKRLQFQTAGQDVFVKIAGGLR
LVEPAADLAVAAAIASGLQDKPCNPAAACCGEIGLAGELRAISDGERRIREAVHLGFKSI
VLPESNTRELKPSLKKLPIKIHGCRTLHEALEAMGV
NT seq 1371 nt   +upstreamnt  +downstreamnt
atggcaaaatcgaccgttcgttacgtctgctccgcctgcggggccgtttcgctgaaatac
cagggacgctgcttcgagtgccagagctggggtacgctcgtcgaaacgcacgagcaggcg
ccggagggcaaaacccgcaagaaagcgccttccggcgcgatgccggaggtgcagaatctc
gacgataccgcgccgttgaacttccaccgtacgctgaccggcatcggcgaactcgaccgc
gtactcggcggcggactgatggaggcgtcggcgattctcgtgggcggcgagccgggcatc
ggcaaatcgacgctgatgatccagcttgtgccgcgcctggcgggcaaaaaggtgctctac
gtggcaggcgaggagtcgccgaaccagatccgcgaacgcgcccggcgtctttcgatcaag
gcaccgaacctgcgcctcgtcgcggaggtggcgctcgaacgcatcctcgacgccatcgcg
agcgagcaacccgatctggtgatcgtcgattcgatccagaccgtctattcgaccgactac
cagagttccgccggaaccatcacgcagattcgcgaatgcgccgcctccctcatccgcgcg
gccaaggagcagaacttcatccttctgattatcggccacatcaccaaggaggggtcgctg
gccgggccgaaggcgctggagcacatggtggacaccgtgttgcagttcgagggcgagggg
taccagcgctaccgcatcatccgctcggtcaaaaaccgcttcggcccgaccaacgagatc
ggcgtgttccgcatggaggagagcggccttgaagaggtggcgaatccttcggagttcttc
atctccgaccgccggacggacgtggcgggcacagcggtgctggcgggcatcgaggggtcg
cgggcgctgctcgtggaggtgcaggcgctcgtctcgcgcacagggtactcgatgccgcag
cgcatcagcaccggcttcgacctcaagcgcatcgccatcatcctcgccgtgctcgaaaag
cgcttgcagttccagaccgccgggcaggatgtgttcgtgaaaattgccggaggactcagg
ctcgtcgaaccggcggcggatctggccgtagcggcggccatcgcctcggggttgcaggac
aagccgtgcaatccggcggcggcctgctgcggcgagatcggcctggcgggcgaactccgc
gccatcagcgacggcgagcgccgcatccgcgaggcggtgcaccttggcttcaagtcgatt
gttttgccggagtcgaacacccgcgaactcaagccgtcgctgaagaagctgccgatcaaa
atccacggctgccgcacgctccacgaagcgctcgaagctatgggggtgtga

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