KEGG   Chlorobaculum limnaeum: BIU88_06020
Entry
BIU88_06020       CDS       T04492                                 
Name
(GenBank) type I-C CRISPR-associated protein Cas8c/Csd1
  KO
K19117  CRISPR-associated protein Csd1
Organism
clz  Chlorobaculum limnaeum
Brite
KEGG Orthology (KO) [BR:clz00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:clz02048]
    BIU88_06020
Prokaryotic defense system [BR:clz02048]
 CRISPR-Cas system
  Type I CRISPR-Cas system
   Subtype I-C factors
    BIU88_06020
SSDB
Motif
Pfam: Cas_Csd1 TP6A_N GETHR
Other DBs
NCBI-ProteinID: AOS83745
UniProt: A0A1D8D2G8
LinkDB
Position
complement(1367942..1369669)
AA seq 575 aa
MILQALYNYYRQKAADPESGIAPPGFEWKEIPFIIVIDMDGNFIALEDTRKGKTKRGETY
LLPKSTGRSGSNSWMTSNLLWDHYGYVLGIPRGDDAKSNEMAKKQLLTFVQNVESLKEHL
GKNDAVAAVALFYEKEEYKKVSSSDKWHECMKIIGCNMSFRIKDDAFLIPCSKSVRLYVE
SLDLNQSDEEGLGICLLTGLYGPIARIHGDTPINKDSKKIVSFQKNSGYDSYGKEQAYNA
PISKIAEFAYTTALNGLLSRNSKNKVQIGDITIVFWAERQSELEQLFPSFFCFPKTDDSE
VDARAVAALNDNACLSVTDGESERFCVLGLGPNAARISVRFWHESTDGEIAAAIRQHFED
IDIVRSTYDTGHYSVYWLLSAMATENKIDNIPSNMASQILRAIVTGEAYPLTMLHQTVLR
IRAMRNVRRMQAGILKAYLNRSSRIHSFSEKEAISMSLDETNMRTGYLLGRLFAVLEKIQ
EQGVPGIHSTIRDHYYASASSTPSTVFPQLLKMKNYHLERIKVRGLRRKYENLLSEIMNR
IQPDMPSGLVMEEQARFALGYYHQKSDFNKSLIIQ
NT seq 1728 nt   +upstreamnt  +downstreamnt
atgattttgcaggcactctataactattaccggcaaaaagcagccgatccggaaagcggc
attgcgccaccgggattcgaatggaaagaaataccatttatcatagttatcgatatggat
gggaattttattgcccttgaagatacacgtaaaggcaaaactaaaagaggtgagacctat
ttgctcccaaagtcgacagggaggtctggttccaactcatggatgaccagtaatttgctt
tgggatcattatggttatgtgctgggaatccccagaggagatgatgctaaaagcaacgaa
atggctaaaaagcagctactcacatttgtacaaaatgtcgaatcattgaaggaacatctt
ggaaaaaatgatgcagtcgccgcagttgctttgttttatgagaaagaagagtataaaaaa
gtgtcgagttccgataagtggcacgaatgcatgaaaatcattggttgtaacatgagcttc
cggatcaaagatgatgctttcttgattccttgcagcaaaagcgttcgattatatgttgag
tctcttgatttaaatcaaagtgatgaagaaggacttggcatttgtcttctgacaggattg
tatgggcctatagctcgaatacatggcgatacgccgataaataaggattcaaaaaaaatc
gtttcttttcagaaaaattcaggttacgattcatatggaaaagaacaggcgtataatgct
ccaataagcaaaatagctgaatttgcctatacgacagcgttaaacggacttctctcacgt
aactcaaaaaataaagttcaaataggtgatattaccatagtcttttgggcagagaggcag
agtgaattagagcagttatttccttcttttttttgttttcccaaaactgatgactccgag
gtcgatgctcgggcagtagccgctctgaatgacaatgcctgtctttccgttactgacgga
gagtctgagcggttttgcgtgttgggactggggccgaacgcggccagaatatcagtgaga
ttctggcatgaaagcactgatggtgaaattgcggctgccatacgacagcattttgaagat
atcgatattgttcgatcaacttatgatactggacattattcagtgtattggttactgtca
gcgatggcgacagaaaacaagattgacaatattccatcgaacatggcatcacaaattctt
cgggctatcgttacgggtgaggcgtatccattaacgatgcttcatcagaccgtgctgcgt
atccgtgcaatgcggaacgtgaggagaatgcaggctggaatattgaaggcttacctgaac
cgttcttccagaattcattcattcagtgaaaaggaggcaatatccatgagtcttgatgaa
acgaacatgagaactggatacctgcttggaaggttgtttgctgttcttgaaaaaattcag
gagcagggagttcctggtattcatagcactatacgtgaccattattatgcatcagcatcg
tcaacgccatcgacagtgtttcctcaattattgaaaatgaagaattaccatcttgaaaga
attaaagttagagggttgaggcgtaaatacgaaaatttgctatcagaaatcatgaacagg
attcaacccgatatgccctctggattggtaatggaagaacaggcacggtttgctttagga
tattatcatcaaaagagtgattttaacaaatccttaattatacaataa

DBGET integrated database retrieval system