Chlorobaculum limnaeum: BIU88_06110
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Entry
BIU88_06110 CDS
T04492
Name
(GenBank) Fe-S cluster assembly protein HesB
KO
K03660
N-glycosylase/DNA lyase [EC:3.2.2.-
4.2.99.18
]
Organism
clz
Chlorobaculum limnaeum
Pathway
clz03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
BIU88_06110
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clz03400
]
BIU88_06110
Enzymes [BR:
clz01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
BIU88_06110
DNA repair and recombination proteins [BR:
clz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
BIU88_06110
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OGG_N
HhH-GPD
HHH_5
Ogg-HhH
Motif
Other DBs
NCBI-ProteinID:
AOS83762
UniProt:
A0A1D8CXW2
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All DBs
Position
1388941..1389888
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AA seq
315 aa
AA seq
DB search
MSNNFFKILLKTDERLDLKQTLFSGQSFTWNFSALYSGYFANIIDNTIIFMREFETGIIE
VLSNRKQINSLPINEFIFRYFSLEIDEIKVFSPKFKNEFPEVWRLVKPYESVRVMRQDPF
EIMVTFMCAQGIGMHLIRRQVSMIAEHYGEKHVLDTEKGSMVLHGFPTPAALASAKVDEL
ARCTNNNRIRAANIIQMARSFESGKLALACVSSGECDLETLRETLCAHSGIGLKIADCIA
LFGLGRFDAFPIDTHVKQYLWEWFSIEVASKSLTEKNYRIMQDEARKILGNEYAGYAGHM
LFHCWRKEVKKMTSF
NT seq
948 nt
NT seq
+upstream
nt +downstream
nt
atgagtaacaatttttttaaaatattacttaaaacagatgagcgacttgatcttaagcaa
acactcttcagtggtcagagttttacttggaatttcagcgctttgtattcagggtatttt
gctaatattattgacaacactataatctttatgcgtgaatttgagaccggtataattgag
gttcttagcaacagaaaacagattaacagtttgccaattaatgaatttatattccgatat
ttttcacttgaaattgacgagataaaggtcttttctccaaaatttaaaaatgaattccca
gaggtatggcgattggtgaagccgtacgagtcagtacgagtcatgaggcaggatccgttt
gaaatcatggtgacattcatgtgtgcccagggcatcggaatgcacctgatccgacgtcag
gtttcgatgattgcagagcactatggtgaaaagcatgtacttgatactgagaaggggtcg
atggttttgcatggcttccctaccccggcggctttggcatccgccaaggtcgatgaactg
gcacgatgcacaaacaacaaccggatcagggcagccaacatcattcaaatggcgcgctct
ttcgagtctggcaagctggcgttagcgtgcgttagttcgggtgaatgcgacctcgaaacg
cttcgcgaaacgttgtgcgcacacagcggaatcggcttgaaaattgccgactgcatcgca
cttttcgggcttgggcggttcgatgcgtttccgatcgatacccacgtgaaacagtacctg
tgggagtggtttagcatagaggtggcaagcaaaagcctgactgaaaagaactacagaatc
atgcaggatgaggcgcgcaaaatcctcggaaacgaatatgctggatacgccgggcacatg
ctgtttcactgctggagaaaagaggttaaaaagatgacatcgttctga
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