Chlorobaculum limnaeum: BIU88_06205
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Entry
BIU88_06205 CDS
T04492
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
clz
Chlorobaculum limnaeum
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clz03016
]
BIU88_06205
Enzymes [BR:
clz01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
BIU88_06205
Transfer RNA biogenesis [BR:
clz03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
BIU88_06205
Prokaryotic type
BIU88_06205
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
AOS83779
UniProt:
A0A1D8D7Z8
LinkDB
All DBs
Position
complement(1410077..1410826)
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AA seq
249 aa
AA seq
DB search
MTVPARTIRMEIEYDGTDFSGWQRQSGALPTVQGAIEAALGRIMQENVSIDGAGRTDKGV
HARGQVASFATASAMELGRLMHSANSLLPPTIRITAMRPVPDSFHARFSATSREYRYFLL
EHPSAIDSRFAGCSRGRPDFAAMNRLAAMLPGTRDFAAFSKEGPDQQGTICTVTSARWYR
SGRFYVFRIEANRFLRSMVRFLVAGMIETGMGRIDEAEFAKMLESTRRLPNLKPADAAGL
FLWKVRYRA
NT seq
750 nt
NT seq
+upstream
nt +downstream
nt
atgacagtaccggcgagaaccatcaggatggagatcgagtacgacggcacggatttttcg
ggctggcagcgccagtcgggcgcgctgccgacggtgcagggggcgatcgaggcggcgctc
ggcaggatcatgcaggagaatgttagcattgacggcgcgggcagaaccgacaagggggtg
cacgctcgcggtcaggtggccagctttgccaccgcctcggcgatggagcttggccgcctg
atgcactcggccaactcgctcttgccgccgacgatccgcatcaccgcgatgaggccggtg
ccggattcgttccacgcccgcttcagcgccacctcgcgggagtaccgctactttttgctc
gaacacccgtcggccatcgacagccgcttcgccggatgctcgcgcggcaggcccgacttt
gccgcgatgaaccggctggcggcgatgttgcccggaacccgcgacttcgcggccttctcg
aaagaggggccggatcagcagggaaccatctgcacggtgacgtcggcccgctggtaccgc
tccggacgtttctacgttttccgcatcgaggcgaaccgcttccttcgcagcatggtgcgc
ttcctggtggccgggatgattgagaccgggatggggcgcatcgacgaagcggagttcgcg
aagatgctcgaaagcacccgccgcctgccgaacctgaaaccggccgacgcggcggggctg
ttcctctggaaagtcagatatcgagcgtga
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