Chlorobaculum limnaeum: BIU88_07460
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Entry
BIU88_07460 CDS
T04492
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
clz
Chlorobaculum limnaeum
Pathway
clz00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
BIU88_07460
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
clz01007
]
BIU88_07460
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
clz03016
]
BIU88_07460
Enzymes [BR:
clz01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
BIU88_07460
Amino acid related enzymes [BR:
clz01007
]
Aminoacyl-tRNA synthetase
Class II (U)
BIU88_07460
Transfer RNA biogenesis [BR:
clz03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
BIU88_07460
Prokaryotic type
BIU88_07460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
B5
FDX-ACB
Motif
Other DBs
NCBI-ProteinID:
AOS83992
UniProt:
A0A1D8CYL7
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All DBs
Position
complement(1683872..1686304)
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AA seq
810 aa
AA seq
DB search
MKISVNWLKEFIPSLSSDSSGLVDHLTFLGLEVEEVFEQKLPDEKVVVGKVAEVRPHPNA
DRLRICMVDTGEGELRQIVCGAPNVEAGMTVPVATIGAELTTDSGESFTIKPAKIRGEHS
SGMICAADELGLSDDHAGVMVLDDGCEIGKPLANYLEADTVFDIAVTPNRPDALSHLGVA
RELADCHEIVYPQAPVIEFTRGGGLVEVQDEEACSYYTATVIRGVKVGQSPRWLARRLEQ
IGLRPKNNIVDITNYILHSFGQPLHAFDLHRLAGSRIIVRSDATDSFMALNNVEYQLQPG
MAAICDSREPVAIGGVMGGLYSAVTDKTTDILLEAAYFNPASIRKTAKQLQLSSDSSYRF
ERGVDPCNVKRAAEYAVAMILEIAGGKVDSAEAWGSMPAAQKIVSLRPKRANAVLGSSIT
ASRMVRLLEKICIKAVSQGAVSDDADQIAFSVPSFRVDIEQEIDLIEEVARLYGYNNLEP
ASAMVSSYPVSRKTPEYFPDYLRNIMIGLNFREALTNPLIRKAEADCFSDMPVSALNPIS
EELEVLRPNLAPSLLKVAAHNMRHGNRDLRLFEVAHGFETQPESERRSGDPLSAFLEKEL
LSMVITGRREPRSWNRQDEKADFYDLRGVVEMLLEKLNLLEKSAFNIYNERTIGIEITST
ENGKHSVLKVGTVQEVGREVLDAFGLDQDVYLAELDVAALERCFDSCVVYESPSKFPVVE
RDLSFVLPRHIPARRLIDIAKASDPLVRSVRVFDVFDRVEPEGDAPMRSVAISLELADRS
GTMNEEAISAVISKVSDSAKSELGAVIRQV
NT seq
2433 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatctccgtcaactggctcaaggagttcatcccctcgctttcatccgatagttcc
ggacttgtcgatcacctgacttttcttggtctcgaagtcgaagaggtcttcgaacaaaaa
ctgcccgacgagaaggtggttgtcggcaaggtggccgaggtcaggccccatccgaatgcc
gaccggctgcgcatctgcatggtcgatacgggcgaaggcgagcttcggcagatcgtctgc
ggcgcgccgaatgtcgaggctggcatgacagtgccggtcgccaccatcggcgcggagctg
acaaccgattccggcgagagcttcaccatcaagcccgcgaaaattcgcggcgagcactcg
tcagggatgatctgtgccgccgacgaactcggcctgtccgacgatcacgccggagtgatg
gtgctcgacgatgggtgcgagattggcaaaccgctggcgaactacctcgaagctgacacg
gtgttcgacatcgccgtgacaccgaaccgccccgacgcgctttcgcatctcggcgtggcc
cgcgagctggccgactgccacgagatcgtctatccgcaagcgccggtgatcgagttcacg
cgcggcggcgggctggtcgaggtgcaagacgaggaggcgtgctcctactacacggccacg
gtcatccgcggcgtcaaggtaggccagtcaccgcgctggctcgcccgacgtctcgaacag
atcggcctgcgtccgaagaacaacatcgtcgatattaccaactacatcctccattcgttt
ggccagccgctgcacgcattcgatttgcaccggcttgccgggagccgcatcatcgtgcgc
agcgacgcaaccgacagcttcatggcgctcaacaatgtcgagtaccagctccagcccggc
atggcggcgatctgcgattcgcgtgaaccggtagccatcggcggcgtcatgggcggcctc
tattccgctgttaccgacaagacgaccgacatcctgctcgaagctgcctatttcaatccg
gcctcgatcaggaagaccgccaaacagctccagctctcctccgactcctcctatcgcttc
gagcggggcgtcgatccgtgcaacgtgaagcgcgccgccgaatacgccgtcgcgatgatt
ctcgaaatcgccgggggcaaagtggattccgccgaagcgtggggcagcatgccagccgcg
cagaaaatcgtgtcactcaggcccaagcgggccaacgccgtgctcggcagctcgatcacc
gcctcacggatggtgcgccttctggaaaaaatctgcatcaaggcggtctcgcaaggggcc
gtgtcggacgatgccgatcagatcgccttctcggtgccctcgttcagggtcgatattgaa
caggagatcgacctgatcgaggaggttgcccgcctctacggctacaacaatcttgagccc
gcctccgcgatggtttcgagctatccggtcagccgcaagacgcctgaatattttcccgat
tatctgcgtaacatcatgatcggccttaacttccgggaggcgctcactaacccgctgatc
cgtaaagccgaggccgactgcttcagcgacatgccggtcagcgcgctcaacccgatcagt
gaagaactcgaagtgcttcgcccgaacctcgctccctcgctgctcaaggtcgccgcgcac
aacatgcggcatggcaatcgcgatcttcgcctcttcgaggtggcgcacggtttcgagacg
cagccggagagcgagcgccggagcggggatccgctttcggcatttctcgaaaaagagctg
ctctcgatggtgattaccggacgccgtgaaccaagaagctggaaccgtcaggacgaaaaa
gccgatttttatgatctccggggcgttgtggagatgttgctcgagaagctgaatttactt
gaaaaatcagcattcaatatttataatgagcggacgattggtattgaaatcacctcgacg
gaaaacgggaaacattccgttttaaaagtgggcacggttcaggaggtcggcagggaggtg
cttgatgcttttggtctcgatcaggatgtgtatctggccgagctggacgttgcggcgctg
gagcgttgtttcgattcatgcgttgtttatgagtcgccgtcgaagtttcccgtggttgaa
agagatctttcattcgtgcttccccgtcatattccggcccgtcgcctgatcgatatcgcc
aaagcgagcgatcccctggtcaggtcggttcgggttttcgatgtgttcgaccgggtcgaa
cccgagggagacgccccgatgcgaagcgtggcaatatcgctggagcttgccgacaggtcg
ggaacgatgaacgaggaggcgatcagcgccgtcatatcgaaggtgagtgacagtgccaaa
agtgaacttggtgcggtaattcggcaagtttga
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