Chlorobaculum limnaeum: BIU88_07990
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Entry
BIU88_07990 CDS
T04492
Name
(GenBank) site-specific tyrosine recombinase XerD
KO
K04763
integrase/recombinase XerD
Organism
clz
Chlorobaculum limnaeum
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
clz03036
]
BIU88_07990
Chromosome and associated proteins [BR:
clz03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
BIU88_07990
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Paralog
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GFIT
Motif
Pfam:
Phage_integrase
Phage_int_SAM_1
Phage_int_SAM_4
Motif
Other DBs
NCBI-ProteinID:
AOS84081
UniProt:
A0A1D8D116
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All DBs
Position
1787548..1788462
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AA seq
304 aa
AA seq
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MAEPDAPWRGALETFLNYLTLERNFSGNTRASYLNDLGRYLAWLHEGGVKPEEVAPGDIR
KFIEELHEIGLEASSIARNISAIRSFHKFLLTERLATMNPAENIHQPKLARYLPAVLNVE
EMTALLDAPLRRHPTAKFMLRDKAMLEFLYATGVRVSELIGLGRLNLHMDDGFVRVFGKG
SKERLVPIGQTAISWMKRYLDELRPGMTSATSHDTIFLNSRGGKLSRMAAWNIVRQHAVI
AGIEKPISPHTFRHSFATHLLEGGADLRVVQEMLGHSSIIATQIYTHIDRSFIKEVHKTF
HPRG
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcggaacccgatgcgccgtggcgcggtgcgctcgaaaccttcctgaactacctgacc
ctcgaacgcaacttttcgggcaacacgcgagcgtcgtacctcaacgaccttggccgttac
ctcgcctggctgcacgagggcggcgtcaaacccgaagaggttgcgccgggggacatccgc
aaattcatcgaggagctgcacgagatcggcctcgaagcgagttcgattgcccggaacatc
tcggcgatccgctcgttccacaagttcctgctcaccgagcggctcgcgacgatgaacccc
gccgagaacatccaccagccaaagctggcccgctacctgcctgccgtgcttaacgtcgag
gagatgacggcgctgctcgacgcgccactcaggcggcatcccacagctaaattcatgctg
cgcgacaaagcgatgctcgaattcctctacgccacgggagtccgggtgagcgagctgatc
gggcttggccgactgaatctgcacatggatgacggtttcgtgcgggtcttcggcaaaggg
tcgaaggagcggctcgtgcccatcggccagacggccatttcgtggatgaagcgctacctc
gacgaactgcgccccggcatgacgagcgcgacctcgcatgacacgatcttcctgaactcg
cgaggcggcaagctctcgcgcatggcggcgtggaacatcgtgcggcagcacgccgtcatc
gcgggcatcgaaaagccgatcagcccgcacaccttccgccactcattcgccacccatctg
ctcgaaggcggcgccgacctgcgcgtcgttcaggagatgctcggccacagctccatcatc
gccacgcaaatctacacccacatcgaccgctcgttcatcaaagaggtgcacaaaactttt
cacccgcggggatga
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