Chlorobaculum limnaeum: BIU88_08335
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Entry
BIU88_08335 CDS
T04492
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
clz
Chlorobaculum limnaeum
Brite
KEGG Orthology (KO) [BR:
clz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
clz03400
]
BIU88_08335
Enzymes [BR:
clz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
BIU88_08335
DNA repair and recombination proteins [BR:
clz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
BIU88_08335
Prokaryotic type
BIU88_08335
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AOS84138
UniProt:
A0A1D8D7H7
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All DBs
Position
complement(1857664..1859046)
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AA seq
460 aa
AA seq
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MNNCHEIDQRRARRLNLRQDQRGPVIYWMSRDQRYQNNWALLFACQKSRQLQQPLEVVFT
LAPSFLGAPLRHYDFMFKGLAEVEASLRNAGIPMTVIFGNPAETLPAFAENRRAGAVISD
FSPLSLVRHWKQNAAAAISCAFYEVDARNIVPCWLASPKQEYAARTIRPRLGALRKSFLT
PFPQPVALCQPDSLLNPPINWDGLLEKLDVDRSLKPVTHLVPGEAAAEKRLHRFIDRVLD
RYADKRNDPNAEAVSGLSPYLHFGQISAQHAAFQALRSMASQENRDAFIEELFIRRELAE
NYCFYNEKYDVFDTLPEWAKATLMEHASDQREYLYTPEEFEQAKTHDPLWNAAQLSLVET
GVMHGYMRMYWAKKILEWSASPAAAFDIAIMLNDRYALDGRDPNGYAGVAWSIGGLHDRP
WSERPVYGKIRYMNASGCKRKFDVPRYIASVTGEAAPMLF
NT seq
1383 nt
NT seq
+upstream
nt +downstream
nt
atgaacaactgccacgaaatcgaccagcgccgggcgcgccggctcaacttgagacaggat
cagagaggccctgtcatatactggatgtccagagaccagcgttaccagaacaactgggcg
ttgctcttcgcctgtcaaaaatcccggcaactgcaacagccgctcgaagtggtcttcacg
ctcgcgccatcgtttcttggcgcgccattgcggcattacgactttatgttcaaaggactt
gccgaggttgaagcttcgctgcgaaacgcgggaattccgatgaccgtgattttcggcaat
ccggcagaaaccctgcccgcttttgcagagaacaggcgggcgggagccgtgatcagcgac
ttttctccgctttctctcgtgcggcactggaaacagaatgccgccgccgcgatttcatgc
gcattctacgaggtcgatgcccgcaatatagtcccctgctggctcgcctccccaaaacag
gagtacgccgcgcggacgatcaggccgagacttggtgctctgcgcaaatcgtttctcacc
ccctttcctcaacctgtggccctctgccagccagacagtttgctgaacccgccgatcaac
tgggacggcttgcttgaaaaactcgatgttgaccggtcactgaagcctgtaacgcacctc
gttccgggagaagctgcggcggagaagcgtttgcacagattcatcgacagggtgcttgac
cgctatgccgacaagcgtaacgatccgaacgcggaggcggtatcggggctgtcgccgtac
ctgcatttcggccagatcagcgcccagcatgctgcttttcaggcattgcgaagcatggcg
tctcaggaaaaccgtgatgctttcatcgaagagctgttcatccggcgcgaacttgcggaa
aactactgcttctacaacgagaagtatgacgtattcgacacgctcccggagtgggccaaa
gcgaccctgatggagcacgcaagtgatcagcgcgaatatctctatactccggaggagttc
gaacaggcaaaaacccacgatcccctctggaatgccgcccagttgtcgcttgtagaaacg
ggcgtgatgcacggctatatgcggatgtattgggcaaaaaagattctcgaatggagcgca
agcccggcggctgcgttcgacatcgccatcatgctcaacgaccgttacgcactcgacgga
cgcgacccgaacggctacgccggcgttgcctggtcgattggcggtctgcacgaccgtccc
tggagcgagcgtccggtctacggaaagatcagatacatgaatgccagcggctgcaaacga
aaattcgatgtgccccgctacatcgcctcagtcacgggcgaggccgcgccgatgctgttc
tga
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